DNA barcode shows discordant cases among morphological and molecular species identification in Isbrueckerichthys (Siluriformes: Loricariidae)
Main Author: | |
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Publication Date: | 2024 |
Other Authors: | , , , , , |
Format: | Article |
Language: | eng |
Source: | Repositório Institucional da UNESP |
Download full: | http://dx.doi.org/10.1590/1982-0224-2024-0040 https://hdl.handle.net/11449/301217 |
Summary: | Isbrueckerichthys is a genus of armored catfish (Siluriformes: Loricariidae) with five species in the lowlands from the Ribeira de Iguape basin and in the uplands of the Tibagi River basin. Despite the validation of the morphological species, molecular data to investigate gene flow and species delimitation have not been completed for all species. For this purpose, we compared sequences of COI region associated with barcoding molecular identification, aiming for a species delimitation analysis and generating population data of I. alipionis, I. epakmos, I. duseni, I. cf. duseni, I. saxicola, and I. calvus. The K2P genetic distance, molecular species delimitation analysis, and well-sustained branches in the phylogenetic tree validate I. alipionis, I. epakmos, and I. duseni, and suggest I. cf. duseni as a valid molecular operational taxonomic unit. However, no differences were detected between I. saxicola and I. calvus. The discordance between molecular and morphological species may be due to the recent dispersal of some Isbrueckerichthys representatives at the border between the Ribeira de Iguape and Tibagi basins. The isolation features of the mountainous region of Ribeira de Iguape basin and headwaters captures to uplands are presented to explain the dispersion and the cases of incipient speciation in Isbrueckerichthys lineages. |
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DNA barcode shows discordant cases among morphological and molecular species identification in Isbrueckerichthys (Siluriformes: Loricariidae)Incipient speciationIntegrative taxonomyMolecular operational taxonomic unitsMolecular species delimitationSystematicsIsbrueckerichthys is a genus of armored catfish (Siluriformes: Loricariidae) with five species in the lowlands from the Ribeira de Iguape basin and in the uplands of the Tibagi River basin. Despite the validation of the morphological species, molecular data to investigate gene flow and species delimitation have not been completed for all species. For this purpose, we compared sequences of COI region associated with barcoding molecular identification, aiming for a species delimitation analysis and generating population data of I. alipionis, I. epakmos, I. duseni, I. cf. duseni, I. saxicola, and I. calvus. The K2P genetic distance, molecular species delimitation analysis, and well-sustained branches in the phylogenetic tree validate I. alipionis, I. epakmos, and I. duseni, and suggest I. cf. duseni as a valid molecular operational taxonomic unit. However, no differences were detected between I. saxicola and I. calvus. The discordance between molecular and morphological species may be due to the recent dispersal of some Isbrueckerichthys representatives at the border between the Ribeira de Iguape and Tibagi basins. The isolation features of the mountainous region of Ribeira de Iguape basin and headwaters captures to uplands are presented to explain the dispersion and the cases of incipient speciation in Isbrueckerichthys lineages.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Programa de Pós-Graduação em Genética Universidade Federal do Paraná Centro Politécnico, Jardim das Américas, PRDepartamento de Biologia Estrutural Molecular e Genética Universidade Estadual de Ponta Grossa, Av. Carlos Cavalcanti, 4748, PRLaboratório de Biologia e Genética de Peixes Departamento de Biologia Estrutural e Funcional Instituto de Biociências de Botucatu Universidade Estadual Paulista, R. Prof. Dr. Antônio C. W. Zanin, s/n, Rubião Jr., SPNúcleo de Pesquisas em Limnologia Ictiologia e Aquicultura (Nupélia) Departamento de Biologia Universidade Estadual de Maringá, Av. Colombo, 5790, PRLaboratório de Biologia e Genética de Peixes Departamento de Biologia Estrutural e Funcional Instituto de Biociências de Botucatu Universidade Estadual Paulista, R. Prof. Dr. Antônio C. W. Zanin, s/n, Rubião Jr., SPCAPES: 001FAPESP: 2020/13433–6CNPq: 306054/2006–0CNPq: 313566/2023–2CNPq: 441128/2020–3Universidade Federal do Paraná (UFPR)Universidade Estadual de Ponta Grossa (UEPG)Universidade Estadual Paulista (UNESP)Universidade Estadual de Maringá (UEM)de Almeida, Rafael B.Azambuja, MatheusNogaroto, VivianeOliveira, Claudio [UNESP]Roxo, Fábio F. [UNESP]Zawadzki, Cláudio H.Vicari, Marcelo R.2025-04-29T18:57:32Z2024-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1590/1982-0224-2024-0040Neotropical Ichthyology, v. 22, n. 3, 2024.1982-02241679-6225https://hdl.handle.net/11449/30121710.1590/1982-0224-2024-00402-s2.0-85208413075Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengNeotropical Ichthyologyinfo:eu-repo/semantics/openAccess2025-04-30T13:36:40Zoai:repositorio.unesp.br:11449/301217Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462025-04-30T13:36:40Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
DNA barcode shows discordant cases among morphological and molecular species identification in Isbrueckerichthys (Siluriformes: Loricariidae) |
title |
DNA barcode shows discordant cases among morphological and molecular species identification in Isbrueckerichthys (Siluriformes: Loricariidae) |
spellingShingle |
DNA barcode shows discordant cases among morphological and molecular species identification in Isbrueckerichthys (Siluriformes: Loricariidae) de Almeida, Rafael B. Incipient speciation Integrative taxonomy Molecular operational taxonomic units Molecular species delimitation Systematics |
title_short |
DNA barcode shows discordant cases among morphological and molecular species identification in Isbrueckerichthys (Siluriformes: Loricariidae) |
title_full |
DNA barcode shows discordant cases among morphological and molecular species identification in Isbrueckerichthys (Siluriformes: Loricariidae) |
title_fullStr |
DNA barcode shows discordant cases among morphological and molecular species identification in Isbrueckerichthys (Siluriformes: Loricariidae) |
title_full_unstemmed |
DNA barcode shows discordant cases among morphological and molecular species identification in Isbrueckerichthys (Siluriformes: Loricariidae) |
title_sort |
DNA barcode shows discordant cases among morphological and molecular species identification in Isbrueckerichthys (Siluriformes: Loricariidae) |
author |
de Almeida, Rafael B. |
author_facet |
de Almeida, Rafael B. Azambuja, Matheus Nogaroto, Viviane Oliveira, Claudio [UNESP] Roxo, Fábio F. [UNESP] Zawadzki, Cláudio H. Vicari, Marcelo R. |
author_role |
author |
author2 |
Azambuja, Matheus Nogaroto, Viviane Oliveira, Claudio [UNESP] Roxo, Fábio F. [UNESP] Zawadzki, Cláudio H. Vicari, Marcelo R. |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal do Paraná (UFPR) Universidade Estadual de Ponta Grossa (UEPG) Universidade Estadual Paulista (UNESP) Universidade Estadual de Maringá (UEM) |
dc.contributor.author.fl_str_mv |
de Almeida, Rafael B. Azambuja, Matheus Nogaroto, Viviane Oliveira, Claudio [UNESP] Roxo, Fábio F. [UNESP] Zawadzki, Cláudio H. Vicari, Marcelo R. |
dc.subject.por.fl_str_mv |
Incipient speciation Integrative taxonomy Molecular operational taxonomic units Molecular species delimitation Systematics |
topic |
Incipient speciation Integrative taxonomy Molecular operational taxonomic units Molecular species delimitation Systematics |
description |
Isbrueckerichthys is a genus of armored catfish (Siluriformes: Loricariidae) with five species in the lowlands from the Ribeira de Iguape basin and in the uplands of the Tibagi River basin. Despite the validation of the morphological species, molecular data to investigate gene flow and species delimitation have not been completed for all species. For this purpose, we compared sequences of COI region associated with barcoding molecular identification, aiming for a species delimitation analysis and generating population data of I. alipionis, I. epakmos, I. duseni, I. cf. duseni, I. saxicola, and I. calvus. The K2P genetic distance, molecular species delimitation analysis, and well-sustained branches in the phylogenetic tree validate I. alipionis, I. epakmos, and I. duseni, and suggest I. cf. duseni as a valid molecular operational taxonomic unit. However, no differences were detected between I. saxicola and I. calvus. The discordance between molecular and morphological species may be due to the recent dispersal of some Isbrueckerichthys representatives at the border between the Ribeira de Iguape and Tibagi basins. The isolation features of the mountainous region of Ribeira de Iguape basin and headwaters captures to uplands are presented to explain the dispersion and the cases of incipient speciation in Isbrueckerichthys lineages. |
publishDate |
2024 |
dc.date.none.fl_str_mv |
2024-01-01 2025-04-29T18:57:32Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/1982-0224-2024-0040 Neotropical Ichthyology, v. 22, n. 3, 2024. 1982-0224 1679-6225 https://hdl.handle.net/11449/301217 10.1590/1982-0224-2024-0040 2-s2.0-85208413075 |
url |
http://dx.doi.org/10.1590/1982-0224-2024-0040 https://hdl.handle.net/11449/301217 |
identifier_str_mv |
Neotropical Ichthyology, v. 22, n. 3, 2024. 1982-0224 1679-6225 10.1590/1982-0224-2024-0040 2-s2.0-85208413075 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Neotropical Ichthyology |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
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UNESP |
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UNESP |
reponame_str |
Repositório Institucional da UNESP |
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Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
repositoriounesp@unesp.br |
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1834482778456981504 |