Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)

Bibliographic Details
Main Author: Oliveira, Maria Ligia M. de [UNESP]
Publication Date: 2016
Other Authors: Utsunomia, Ricardo [UNESP], Pansonato-Alves, Jose Carlos [UNESP], Scacchetti, Priscilla C. [UNESP], Primo, Cleberson C., Vicari, Marcelo R., Artoni, Roberto F., Centofante, Liano, Moreira-Filho, Orlando, Oliveira, Claudio [UNESP], Foresti, Fausto [UNESP]
Format: Article
Language: eng
Source: Repositório Institucional da UNESP
Download full: http://dx.doi.org/10.1590/1982-0224-20150084
http://hdl.handle.net/11449/161788
Summary: Trichomycterus is a specious fish genus within Trichomycterinae and displays remarkable karyotype diversity. However, knowledge about their genomic structure and location of repetitive sequence is still limited. In order to better understand the karyotype diversification, we analyzed nine species of Trichomycterus using classical and molecular cytogenetic techniques. Results revealed a conserved diploid chromosome number of 2n=54 chromosomes in all analyzed species, although remarkable differences on the constitutive heterochromatin distribution were observed. In addition, while the 18S rDNA showed a conserved distribution pattern, the 5S rDNA sites showed a quite diverse location considering the analyzed species. Remarkably, both ribosomal genes were co-located in all species, except in T. iheringi, suggesting that co-localization is probably an ancestral condition in Trichomycterus. Finally, three analyzed species showed heterochromatic B chromosomes, reinforcing the intense genomic reorganization occurring in Trichomycterus. Our results showed that chromosomal variations are not restricted to differences in karyotype formula as previously proposed, but also to modifications on the microstructural level of resolution.
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spelling Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)Karyotype diversityRepetitive DNArDNASupernumerary chromosomesTrichomycterus is a specious fish genus within Trichomycterinae and displays remarkable karyotype diversity. However, knowledge about their genomic structure and location of repetitive sequence is still limited. In order to better understand the karyotype diversification, we analyzed nine species of Trichomycterus using classical and molecular cytogenetic techniques. Results revealed a conserved diploid chromosome number of 2n=54 chromosomes in all analyzed species, although remarkable differences on the constitutive heterochromatin distribution were observed. In addition, while the 18S rDNA showed a conserved distribution pattern, the 5S rDNA sites showed a quite diverse location considering the analyzed species. Remarkably, both ribosomal genes were co-located in all species, except in T. iheringi, suggesting that co-localization is probably an ancestral condition in Trichomycterus. Finally, three analyzed species showed heterochromatic B chromosomes, reinforcing the intense genomic reorganization occurring in Trichomycterus. Our results showed that chromosomal variations are not restricted to differences in karyotype formula as previously proposed, but also to modifications on the microstructural level of resolution.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Univ Estadual Paulista, Inst Biociencias Botucatu, Dept Morfol, Dist Rubiao Jr S-N, BR-18618970 Botucatu, SP, BrazilUniv Estadual Ponta Grossa, Programa Posgrad Biol Evolut, Dept Biol Estrutural Mol & Genet, Av Carlos Cavalcanti 4748, BR-84030900 Ponta Grossa, PR, BrazilUniv Fed Mato Grosso, Inst Biociencias, Av Fernando Correa Costa S-N Coxipo, BR-78068000 Curitiba, Parana, BrazilUniv Fed Sao Carlos, Dept Genet & Evolucao, Rodovia Washington Luis,Km 235, BR-13565905 Sao Carlos, SP, BrazilUniv Estadual Paulista, Inst Biociencias Botucatu, Dept Morfol, Dist Rubiao Jr S-N, BR-18618970 Botucatu, SP, BrazilSoc Brasileira IctiologiaUniversidade Estadual Paulista (Unesp)Universidade Estadual de Ponta Grossa (UEPG)Universidade Federal de Mato Grosso do Sul (UFMS)Universidade Federal de São Carlos (UFSCar)Oliveira, Maria Ligia M. de [UNESP]Utsunomia, Ricardo [UNESP]Pansonato-Alves, Jose Carlos [UNESP]Scacchetti, Priscilla C. [UNESP]Primo, Cleberson C.Vicari, Marcelo R.Artoni, Roberto F.Centofante, LianoMoreira-Filho, OrlandoOliveira, Claudio [UNESP]Foresti, Fausto [UNESP]2018-11-26T16:54:48Z2018-11-26T16:54:48Z2016-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article8application/pdfhttp://dx.doi.org/10.1590/1982-0224-20150084Neotropical Ichthyology. Sao Paulo: Soc Brasileira Ictiologia, v. 14, n. 2, 8 p., 2016.1679-6225http://hdl.handle.net/11449/16178810.1590/1982-0224-20150084S1679-62252016000200211WOS:000380831900006S1679-62252016000200211.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengNeotropical Ichthyology0,559info:eu-repo/semantics/openAccess2024-10-14T19:15:39Zoai:repositorio.unesp.br:11449/161788Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-10-14T19:15:39Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)
title Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)
spellingShingle Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)
Oliveira, Maria Ligia M. de [UNESP]
Karyotype diversity
Repetitive DNA
rDNA
Supernumerary chromosomes
title_short Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)
title_full Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)
title_fullStr Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)
title_full_unstemmed Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)
title_sort Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)
author Oliveira, Maria Ligia M. de [UNESP]
author_facet Oliveira, Maria Ligia M. de [UNESP]
Utsunomia, Ricardo [UNESP]
Pansonato-Alves, Jose Carlos [UNESP]
Scacchetti, Priscilla C. [UNESP]
Primo, Cleberson C.
Vicari, Marcelo R.
Artoni, Roberto F.
Centofante, Liano
Moreira-Filho, Orlando
Oliveira, Claudio [UNESP]
Foresti, Fausto [UNESP]
author_role author
author2 Utsunomia, Ricardo [UNESP]
Pansonato-Alves, Jose Carlos [UNESP]
Scacchetti, Priscilla C. [UNESP]
Primo, Cleberson C.
Vicari, Marcelo R.
Artoni, Roberto F.
Centofante, Liano
Moreira-Filho, Orlando
Oliveira, Claudio [UNESP]
Foresti, Fausto [UNESP]
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade Estadual de Ponta Grossa (UEPG)
Universidade Federal de Mato Grosso do Sul (UFMS)
Universidade Federal de São Carlos (UFSCar)
dc.contributor.author.fl_str_mv Oliveira, Maria Ligia M. de [UNESP]
Utsunomia, Ricardo [UNESP]
Pansonato-Alves, Jose Carlos [UNESP]
Scacchetti, Priscilla C. [UNESP]
Primo, Cleberson C.
Vicari, Marcelo R.
Artoni, Roberto F.
Centofante, Liano
Moreira-Filho, Orlando
Oliveira, Claudio [UNESP]
Foresti, Fausto [UNESP]
dc.subject.por.fl_str_mv Karyotype diversity
Repetitive DNA
rDNA
Supernumerary chromosomes
topic Karyotype diversity
Repetitive DNA
rDNA
Supernumerary chromosomes
description Trichomycterus is a specious fish genus within Trichomycterinae and displays remarkable karyotype diversity. However, knowledge about their genomic structure and location of repetitive sequence is still limited. In order to better understand the karyotype diversification, we analyzed nine species of Trichomycterus using classical and molecular cytogenetic techniques. Results revealed a conserved diploid chromosome number of 2n=54 chromosomes in all analyzed species, although remarkable differences on the constitutive heterochromatin distribution were observed. In addition, while the 18S rDNA showed a conserved distribution pattern, the 5S rDNA sites showed a quite diverse location considering the analyzed species. Remarkably, both ribosomal genes were co-located in all species, except in T. iheringi, suggesting that co-localization is probably an ancestral condition in Trichomycterus. Finally, three analyzed species showed heterochromatic B chromosomes, reinforcing the intense genomic reorganization occurring in Trichomycterus. Our results showed that chromosomal variations are not restricted to differences in karyotype formula as previously proposed, but also to modifications on the microstructural level of resolution.
publishDate 2016
dc.date.none.fl_str_mv 2016-01-01
2018-11-26T16:54:48Z
2018-11-26T16:54:48Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/1982-0224-20150084
Neotropical Ichthyology. Sao Paulo: Soc Brasileira Ictiologia, v. 14, n. 2, 8 p., 2016.
1679-6225
http://hdl.handle.net/11449/161788
10.1590/1982-0224-20150084
S1679-62252016000200211
WOS:000380831900006
S1679-62252016000200211.pdf
url http://dx.doi.org/10.1590/1982-0224-20150084
http://hdl.handle.net/11449/161788
identifier_str_mv Neotropical Ichthyology. Sao Paulo: Soc Brasileira Ictiologia, v. 14, n. 2, 8 p., 2016.
1679-6225
10.1590/1982-0224-20150084
S1679-62252016000200211
WOS:000380831900006
S1679-62252016000200211.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Neotropical Ichthyology
0,559
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eu_rights_str_mv openAccess
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application/pdf
dc.publisher.none.fl_str_mv Soc Brasileira Ictiologia
publisher.none.fl_str_mv Soc Brasileira Ictiologia
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
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