Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)
Main Author: | |
---|---|
Publication Date: | 2016 |
Other Authors: | , , , , , , , , , |
Format: | Article |
Language: | eng |
Source: | Repositório Institucional da UNESP |
Download full: | http://dx.doi.org/10.1590/1982-0224-20150084 http://hdl.handle.net/11449/161788 |
Summary: | Trichomycterus is a specious fish genus within Trichomycterinae and displays remarkable karyotype diversity. However, knowledge about their genomic structure and location of repetitive sequence is still limited. In order to better understand the karyotype diversification, we analyzed nine species of Trichomycterus using classical and molecular cytogenetic techniques. Results revealed a conserved diploid chromosome number of 2n=54 chromosomes in all analyzed species, although remarkable differences on the constitutive heterochromatin distribution were observed. In addition, while the 18S rDNA showed a conserved distribution pattern, the 5S rDNA sites showed a quite diverse location considering the analyzed species. Remarkably, both ribosomal genes were co-located in all species, except in T. iheringi, suggesting that co-localization is probably an ancestral condition in Trichomycterus. Finally, three analyzed species showed heterochromatic B chromosomes, reinforcing the intense genomic reorganization occurring in Trichomycterus. Our results showed that chromosomal variations are not restricted to differences in karyotype formula as previously proposed, but also to modifications on the microstructural level of resolution. |
id |
UNSP_af32a4b8b0331d35f5448cbbda26c66b |
---|---|
oai_identifier_str |
oai:repositorio.unesp.br:11449/161788 |
network_acronym_str |
UNSP |
network_name_str |
Repositório Institucional da UNESP |
repository_id_str |
2946 |
spelling |
Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)Karyotype diversityRepetitive DNArDNASupernumerary chromosomesTrichomycterus is a specious fish genus within Trichomycterinae and displays remarkable karyotype diversity. However, knowledge about their genomic structure and location of repetitive sequence is still limited. In order to better understand the karyotype diversification, we analyzed nine species of Trichomycterus using classical and molecular cytogenetic techniques. Results revealed a conserved diploid chromosome number of 2n=54 chromosomes in all analyzed species, although remarkable differences on the constitutive heterochromatin distribution were observed. In addition, while the 18S rDNA showed a conserved distribution pattern, the 5S rDNA sites showed a quite diverse location considering the analyzed species. Remarkably, both ribosomal genes were co-located in all species, except in T. iheringi, suggesting that co-localization is probably an ancestral condition in Trichomycterus. Finally, three analyzed species showed heterochromatic B chromosomes, reinforcing the intense genomic reorganization occurring in Trichomycterus. Our results showed that chromosomal variations are not restricted to differences in karyotype formula as previously proposed, but also to modifications on the microstructural level of resolution.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Univ Estadual Paulista, Inst Biociencias Botucatu, Dept Morfol, Dist Rubiao Jr S-N, BR-18618970 Botucatu, SP, BrazilUniv Estadual Ponta Grossa, Programa Posgrad Biol Evolut, Dept Biol Estrutural Mol & Genet, Av Carlos Cavalcanti 4748, BR-84030900 Ponta Grossa, PR, BrazilUniv Fed Mato Grosso, Inst Biociencias, Av Fernando Correa Costa S-N Coxipo, BR-78068000 Curitiba, Parana, BrazilUniv Fed Sao Carlos, Dept Genet & Evolucao, Rodovia Washington Luis,Km 235, BR-13565905 Sao Carlos, SP, BrazilUniv Estadual Paulista, Inst Biociencias Botucatu, Dept Morfol, Dist Rubiao Jr S-N, BR-18618970 Botucatu, SP, BrazilSoc Brasileira IctiologiaUniversidade Estadual Paulista (Unesp)Universidade Estadual de Ponta Grossa (UEPG)Universidade Federal de Mato Grosso do Sul (UFMS)Universidade Federal de São Carlos (UFSCar)Oliveira, Maria Ligia M. de [UNESP]Utsunomia, Ricardo [UNESP]Pansonato-Alves, Jose Carlos [UNESP]Scacchetti, Priscilla C. [UNESP]Primo, Cleberson C.Vicari, Marcelo R.Artoni, Roberto F.Centofante, LianoMoreira-Filho, OrlandoOliveira, Claudio [UNESP]Foresti, Fausto [UNESP]2018-11-26T16:54:48Z2018-11-26T16:54:48Z2016-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article8application/pdfhttp://dx.doi.org/10.1590/1982-0224-20150084Neotropical Ichthyology. Sao Paulo: Soc Brasileira Ictiologia, v. 14, n. 2, 8 p., 2016.1679-6225http://hdl.handle.net/11449/16178810.1590/1982-0224-20150084S1679-62252016000200211WOS:000380831900006S1679-62252016000200211.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengNeotropical Ichthyology0,559info:eu-repo/semantics/openAccess2024-10-14T19:15:39Zoai:repositorio.unesp.br:11449/161788Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-10-14T19:15:39Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae) |
title |
Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae) |
spellingShingle |
Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae) Oliveira, Maria Ligia M. de [UNESP] Karyotype diversity Repetitive DNA rDNA Supernumerary chromosomes |
title_short |
Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae) |
title_full |
Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae) |
title_fullStr |
Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae) |
title_full_unstemmed |
Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae) |
title_sort |
Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae) |
author |
Oliveira, Maria Ligia M. de [UNESP] |
author_facet |
Oliveira, Maria Ligia M. de [UNESP] Utsunomia, Ricardo [UNESP] Pansonato-Alves, Jose Carlos [UNESP] Scacchetti, Priscilla C. [UNESP] Primo, Cleberson C. Vicari, Marcelo R. Artoni, Roberto F. Centofante, Liano Moreira-Filho, Orlando Oliveira, Claudio [UNESP] Foresti, Fausto [UNESP] |
author_role |
author |
author2 |
Utsunomia, Ricardo [UNESP] Pansonato-Alves, Jose Carlos [UNESP] Scacchetti, Priscilla C. [UNESP] Primo, Cleberson C. Vicari, Marcelo R. Artoni, Roberto F. Centofante, Liano Moreira-Filho, Orlando Oliveira, Claudio [UNESP] Foresti, Fausto [UNESP] |
author2_role |
author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade Estadual de Ponta Grossa (UEPG) Universidade Federal de Mato Grosso do Sul (UFMS) Universidade Federal de São Carlos (UFSCar) |
dc.contributor.author.fl_str_mv |
Oliveira, Maria Ligia M. de [UNESP] Utsunomia, Ricardo [UNESP] Pansonato-Alves, Jose Carlos [UNESP] Scacchetti, Priscilla C. [UNESP] Primo, Cleberson C. Vicari, Marcelo R. Artoni, Roberto F. Centofante, Liano Moreira-Filho, Orlando Oliveira, Claudio [UNESP] Foresti, Fausto [UNESP] |
dc.subject.por.fl_str_mv |
Karyotype diversity Repetitive DNA rDNA Supernumerary chromosomes |
topic |
Karyotype diversity Repetitive DNA rDNA Supernumerary chromosomes |
description |
Trichomycterus is a specious fish genus within Trichomycterinae and displays remarkable karyotype diversity. However, knowledge about their genomic structure and location of repetitive sequence is still limited. In order to better understand the karyotype diversification, we analyzed nine species of Trichomycterus using classical and molecular cytogenetic techniques. Results revealed a conserved diploid chromosome number of 2n=54 chromosomes in all analyzed species, although remarkable differences on the constitutive heterochromatin distribution were observed. In addition, while the 18S rDNA showed a conserved distribution pattern, the 5S rDNA sites showed a quite diverse location considering the analyzed species. Remarkably, both ribosomal genes were co-located in all species, except in T. iheringi, suggesting that co-localization is probably an ancestral condition in Trichomycterus. Finally, three analyzed species showed heterochromatic B chromosomes, reinforcing the intense genomic reorganization occurring in Trichomycterus. Our results showed that chromosomal variations are not restricted to differences in karyotype formula as previously proposed, but also to modifications on the microstructural level of resolution. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-01-01 2018-11-26T16:54:48Z 2018-11-26T16:54:48Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/1982-0224-20150084 Neotropical Ichthyology. Sao Paulo: Soc Brasileira Ictiologia, v. 14, n. 2, 8 p., 2016. 1679-6225 http://hdl.handle.net/11449/161788 10.1590/1982-0224-20150084 S1679-62252016000200211 WOS:000380831900006 S1679-62252016000200211.pdf |
url |
http://dx.doi.org/10.1590/1982-0224-20150084 http://hdl.handle.net/11449/161788 |
identifier_str_mv |
Neotropical Ichthyology. Sao Paulo: Soc Brasileira Ictiologia, v. 14, n. 2, 8 p., 2016. 1679-6225 10.1590/1982-0224-20150084 S1679-62252016000200211 WOS:000380831900006 S1679-62252016000200211.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Neotropical Ichthyology 0,559 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
8 application/pdf |
dc.publisher.none.fl_str_mv |
Soc Brasileira Ictiologia |
publisher.none.fl_str_mv |
Soc Brasileira Ictiologia |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
repositoriounesp@unesp.br |
_version_ |
1834483482256998400 |