Layer-selective deep representation to improve esophageal cancer classification
Autor(a) principal: | |
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Data de Publicação: | 2024 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1007/s11517-024-03142-8 https://hdl.handle.net/11449/309738 |
Resumo: | Abstract: Even though artificial intelligence and machine learning have demonstrated remarkable performances in medical image computing, their accountability and transparency level must be improved to transfer this success into clinical practice. The reliability of machine learning decisions must be explained and interpreted, especially for supporting the medical diagnosis. For this task, the deep learning techniques’ black-box nature must somehow be lightened up to clarify its promising results. Hence, we aim to investigate the impact of the ResNet-50 deep convolutional design for Barrett’s esophagus and adenocarcinoma classification. For such a task, and aiming at proposing a two-step learning technique, the output of each convolutional layer that composes the ResNet-50 architecture was trained and classified for further definition of layers that would provide more impact in the architecture. We showed that local information and high-dimensional features are essential to improve the classification for our task. Besides, we observed a significant improvement when the most discriminative layers expressed more impact in the training and classification of ResNet-50 for Barrett’s esophagus and adenocarcinoma classification, demonstrating that both human knowledge and computational processing may influence the correct learning of such a problem. Graphical abstract: (Figure presented.) |
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Layer-selective deep representation to improve esophageal cancer classificationBarrett’s esophagus detectionConvolutional neural networksDeep learningMultistep trainingAbstract: Even though artificial intelligence and machine learning have demonstrated remarkable performances in medical image computing, their accountability and transparency level must be improved to transfer this success into clinical practice. The reliability of machine learning decisions must be explained and interpreted, especially for supporting the medical diagnosis. For this task, the deep learning techniques’ black-box nature must somehow be lightened up to clarify its promising results. Hence, we aim to investigate the impact of the ResNet-50 deep convolutional design for Barrett’s esophagus and adenocarcinoma classification. For such a task, and aiming at proposing a two-step learning technique, the output of each convolutional layer that composes the ResNet-50 architecture was trained and classified for further definition of layers that would provide more impact in the architecture. We showed that local information and high-dimensional features are essential to improve the classification for our task. Besides, we observed a significant improvement when the most discriminative layers expressed more impact in the training and classification of ResNet-50 for Barrett’s esophagus and adenocarcinoma classification, demonstrating that both human knowledge and computational processing may influence the correct learning of such a problem. Graphical abstract: (Figure presented.)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Alexander von Humboldt-StiftungEngineering and Physical Sciences Research CouncilDepartment of Informatics Espírito Santo Federal UniversityCMI Lab School of Engineering and Informatics University of WolverhamptonDepartment of Computing São Paulo State UniversityRegensburg Medical Image Computing (ReMIC) Ostbayerische Technische Hochschule Regensburg (OTH Regensburg)Department of Gastroenterology University Hospital AugsburgDepartment of Computing São Paulo State UniversityFAPESP: 2013/07375-0FAPESP: 2014/12236- 1FAPESP: 2016/19403-6FAPESP: 2017/04847-9FAPESP: 2019/08605-5CNPq: 306166/2014-3CNPq: 307066/2017-7Alexander von Humboldt-Stiftung: BEX 0581-16-0Engineering and Physical Sciences Research Council: EP/T021063/1Espírito Santo Federal UniversityUniversity of WolverhamptonUniversidade Estadual Paulista (UNESP)Ostbayerische Technische Hochschule Regensburg (OTH Regensburg)University Hospital AugsburgSouza, Luis A.Passos, Leandro A.Santana, Marcos Cleison S. [UNESP]Mendel, RobertRauber, DavidEbigbo, AlannaProbst, AndreasMessmann, HelmutPapa, João Paulo [UNESP]Palm, Christoph2025-04-29T20:16:28Z2024-11-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article3355-3372http://dx.doi.org/10.1007/s11517-024-03142-8Medical and Biological Engineering and Computing, v. 62, n. 11, p. 3355-3372, 2024.1741-04440140-0118https://hdl.handle.net/11449/30973810.1007/s11517-024-03142-82-s2.0-85195390128Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMedical and Biological Engineering and Computinginfo:eu-repo/semantics/openAccess2025-04-30T13:33:29Zoai:repositorio.unesp.br:11449/309738Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462025-04-30T13:33:29Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Layer-selective deep representation to improve esophageal cancer classification |
title |
Layer-selective deep representation to improve esophageal cancer classification |
spellingShingle |
Layer-selective deep representation to improve esophageal cancer classification Souza, Luis A. Barrett’s esophagus detection Convolutional neural networks Deep learning Multistep training |
title_short |
Layer-selective deep representation to improve esophageal cancer classification |
title_full |
Layer-selective deep representation to improve esophageal cancer classification |
title_fullStr |
Layer-selective deep representation to improve esophageal cancer classification |
title_full_unstemmed |
Layer-selective deep representation to improve esophageal cancer classification |
title_sort |
Layer-selective deep representation to improve esophageal cancer classification |
author |
Souza, Luis A. |
author_facet |
Souza, Luis A. Passos, Leandro A. Santana, Marcos Cleison S. [UNESP] Mendel, Robert Rauber, David Ebigbo, Alanna Probst, Andreas Messmann, Helmut Papa, João Paulo [UNESP] Palm, Christoph |
author_role |
author |
author2 |
Passos, Leandro A. Santana, Marcos Cleison S. [UNESP] Mendel, Robert Rauber, David Ebigbo, Alanna Probst, Andreas Messmann, Helmut Papa, João Paulo [UNESP] Palm, Christoph |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Espírito Santo Federal University University of Wolverhampton Universidade Estadual Paulista (UNESP) Ostbayerische Technische Hochschule Regensburg (OTH Regensburg) University Hospital Augsburg |
dc.contributor.author.fl_str_mv |
Souza, Luis A. Passos, Leandro A. Santana, Marcos Cleison S. [UNESP] Mendel, Robert Rauber, David Ebigbo, Alanna Probst, Andreas Messmann, Helmut Papa, João Paulo [UNESP] Palm, Christoph |
dc.subject.por.fl_str_mv |
Barrett’s esophagus detection Convolutional neural networks Deep learning Multistep training |
topic |
Barrett’s esophagus detection Convolutional neural networks Deep learning Multistep training |
description |
Abstract: Even though artificial intelligence and machine learning have demonstrated remarkable performances in medical image computing, their accountability and transparency level must be improved to transfer this success into clinical practice. The reliability of machine learning decisions must be explained and interpreted, especially for supporting the medical diagnosis. For this task, the deep learning techniques’ black-box nature must somehow be lightened up to clarify its promising results. Hence, we aim to investigate the impact of the ResNet-50 deep convolutional design for Barrett’s esophagus and adenocarcinoma classification. For such a task, and aiming at proposing a two-step learning technique, the output of each convolutional layer that composes the ResNet-50 architecture was trained and classified for further definition of layers that would provide more impact in the architecture. We showed that local information and high-dimensional features are essential to improve the classification for our task. Besides, we observed a significant improvement when the most discriminative layers expressed more impact in the training and classification of ResNet-50 for Barrett’s esophagus and adenocarcinoma classification, demonstrating that both human knowledge and computational processing may influence the correct learning of such a problem. Graphical abstract: (Figure presented.) |
publishDate |
2024 |
dc.date.none.fl_str_mv |
2024-11-01 2025-04-29T20:16:28Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1007/s11517-024-03142-8 Medical and Biological Engineering and Computing, v. 62, n. 11, p. 3355-3372, 2024. 1741-0444 0140-0118 https://hdl.handle.net/11449/309738 10.1007/s11517-024-03142-8 2-s2.0-85195390128 |
url |
http://dx.doi.org/10.1007/s11517-024-03142-8 https://hdl.handle.net/11449/309738 |
identifier_str_mv |
Medical and Biological Engineering and Computing, v. 62, n. 11, p. 3355-3372, 2024. 1741-0444 0140-0118 10.1007/s11517-024-03142-8 2-s2.0-85195390128 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Medical and Biological Engineering and Computing |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
3355-3372 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
repositoriounesp@unesp.br |
_version_ |
1834482592732151808 |