Genetic diversity of campomanesia adamantium and its correlation with land use and land cover
Main Author: | |
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Publication Date: | 2021 |
Other Authors: | , , , , , |
Format: | Article |
Language: | eng |
Source: | Repositório Institucional da Udesc |
dARK ID: | ark:/33523/00130000087fj |
Download full: | https://repositorio.udesc.br/handle/UDESC/4204 |
Summary: | © 2021 by the authors. Licensee MDPI, Basel, Switzerland.(1) Background: Campomanesia adamantium is an endemic species of the Cerrado and this biome has been under threat by its constant degradation. The genetic diversity of C. adamantium was characterized using species-specific microsatellites in two different time periods and correlations of these parameters of genetic diversity with the land use and land cover data. (2) Methods: We used 10 microsatellite loci to analyze C. adamantium from five populations, collected in 2011 and 2017. Maps of land use and land cover of the collection sites in both years were generated and subsequently correlated with genetic diversity. (3) Results: No significant loss of genetic diversity was observed in the analyzed period and a positive inbreeding coefficient was observed in all populations. AMOVA and STRUCTURE showed that there is no population structure between years and populations. Significant Pearson correlations were observed in 2017 between parameters of genetic diversity and land use and land cover, with a positive correlation between expected heterozygosity and secondary vegetation, and a negative correlation between inbreeding coefficient and exposed soil. (4) Conclusions: There was no decline in genetic diversity from 2011 to 2017. The high rates of the inbreeding coefficient could lead, for the species, in the long run, to an inbreeding depression as the Cerrado fragmentation might cause a population bottleneck. |
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Genetic diversity of campomanesia adamantium and its correlation with land use and land cover© 2021 by the authors. Licensee MDPI, Basel, Switzerland.(1) Background: Campomanesia adamantium is an endemic species of the Cerrado and this biome has been under threat by its constant degradation. The genetic diversity of C. adamantium was characterized using species-specific microsatellites in two different time periods and correlations of these parameters of genetic diversity with the land use and land cover data. (2) Methods: We used 10 microsatellite loci to analyze C. adamantium from five populations, collected in 2011 and 2017. Maps of land use and land cover of the collection sites in both years were generated and subsequently correlated with genetic diversity. (3) Results: No significant loss of genetic diversity was observed in the analyzed period and a positive inbreeding coefficient was observed in all populations. AMOVA and STRUCTURE showed that there is no population structure between years and populations. Significant Pearson correlations were observed in 2017 between parameters of genetic diversity and land use and land cover, with a positive correlation between expected heterozygosity and secondary vegetation, and a negative correlation between inbreeding coefficient and exposed soil. (4) Conclusions: There was no decline in genetic diversity from 2011 to 2017. The high rates of the inbreeding coefficient could lead, for the species, in the long run, to an inbreeding depression as the Cerrado fragmentation might cause a population bottleneck.2024-12-06T11:45:13Z2021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1424-281810.3390/d13040160https://repositorio.udesc.br/handle/UDESC/4204ark:/33523/00130000087fjDiversity134Crispim B.D.A.Fernandes J.S.Zucchi M.I.Batista C.E.A.Bajay, Miklos MaximilianoVieira M.D.C.Barufatti A.engreponame:Repositório Institucional da Udescinstname:Universidade do Estado de Santa Catarina (UDESC)instacron:UDESCinfo:eu-repo/semantics/openAccess2024-12-07T20:43:56Zoai:repositorio.udesc.br:UDESC/4204Biblioteca Digital de Teses e Dissertaçõeshttps://pergamumweb.udesc.br/biblioteca/index.phpPRIhttps://repositorio-api.udesc.br/server/oai/requestri@udesc.bropendoar:63912024-12-07T20:43:56Repositório Institucional da Udesc - Universidade do Estado de Santa Catarina (UDESC)false |
dc.title.none.fl_str_mv |
Genetic diversity of campomanesia adamantium and its correlation with land use and land cover |
title |
Genetic diversity of campomanesia adamantium and its correlation with land use and land cover |
spellingShingle |
Genetic diversity of campomanesia adamantium and its correlation with land use and land cover Crispim B.D.A. |
title_short |
Genetic diversity of campomanesia adamantium and its correlation with land use and land cover |
title_full |
Genetic diversity of campomanesia adamantium and its correlation with land use and land cover |
title_fullStr |
Genetic diversity of campomanesia adamantium and its correlation with land use and land cover |
title_full_unstemmed |
Genetic diversity of campomanesia adamantium and its correlation with land use and land cover |
title_sort |
Genetic diversity of campomanesia adamantium and its correlation with land use and land cover |
author |
Crispim B.D.A. |
author_facet |
Crispim B.D.A. Fernandes J.S. Zucchi M.I. Batista C.E.A. Bajay, Miklos Maximiliano Vieira M.D.C. Barufatti A. |
author_role |
author |
author2 |
Fernandes J.S. Zucchi M.I. Batista C.E.A. Bajay, Miklos Maximiliano Vieira M.D.C. Barufatti A. |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Crispim B.D.A. Fernandes J.S. Zucchi M.I. Batista C.E.A. Bajay, Miklos Maximiliano Vieira M.D.C. Barufatti A. |
description |
© 2021 by the authors. Licensee MDPI, Basel, Switzerland.(1) Background: Campomanesia adamantium is an endemic species of the Cerrado and this biome has been under threat by its constant degradation. The genetic diversity of C. adamantium was characterized using species-specific microsatellites in two different time periods and correlations of these parameters of genetic diversity with the land use and land cover data. (2) Methods: We used 10 microsatellite loci to analyze C. adamantium from five populations, collected in 2011 and 2017. Maps of land use and land cover of the collection sites in both years were generated and subsequently correlated with genetic diversity. (3) Results: No significant loss of genetic diversity was observed in the analyzed period and a positive inbreeding coefficient was observed in all populations. AMOVA and STRUCTURE showed that there is no population structure between years and populations. Significant Pearson correlations were observed in 2017 between parameters of genetic diversity and land use and land cover, with a positive correlation between expected heterozygosity and secondary vegetation, and a negative correlation between inbreeding coefficient and exposed soil. (4) Conclusions: There was no decline in genetic diversity from 2011 to 2017. The high rates of the inbreeding coefficient could lead, for the species, in the long run, to an inbreeding depression as the Cerrado fragmentation might cause a population bottleneck. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021 2024-12-06T11:45:13Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
1424-2818 10.3390/d13040160 https://repositorio.udesc.br/handle/UDESC/4204 |
dc.identifier.dark.fl_str_mv |
ark:/33523/00130000087fj |
identifier_str_mv |
1424-2818 10.3390/d13040160 ark:/33523/00130000087fj |
url |
https://repositorio.udesc.br/handle/UDESC/4204 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Diversity 13 4 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da Udesc instname:Universidade do Estado de Santa Catarina (UDESC) instacron:UDESC |
instname_str |
Universidade do Estado de Santa Catarina (UDESC) |
instacron_str |
UDESC |
institution |
UDESC |
reponame_str |
Repositório Institucional da Udesc |
collection |
Repositório Institucional da Udesc |
repository.name.fl_str_mv |
Repositório Institucional da Udesc - Universidade do Estado de Santa Catarina (UDESC) |
repository.mail.fl_str_mv |
ri@udesc.br |
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1842258101479145472 |