Genetic diversity of campomanesia adamantium and its correlation with land use and land cover

Bibliographic Details
Main Author: Crispim B.D.A.
Publication Date: 2021
Other Authors: Fernandes J.S., Zucchi M.I., Batista C.E.A., Bajay, Miklos Maximiliano, Vieira M.D.C., Barufatti A.
Format: Article
Language: eng
Source: Repositório Institucional da Udesc
dARK ID: ark:/33523/00130000087fj
Download full: https://repositorio.udesc.br/handle/UDESC/4204
Summary: © 2021 by the authors. Licensee MDPI, Basel, Switzerland.(1) Background: Campomanesia adamantium is an endemic species of the Cerrado and this biome has been under threat by its constant degradation. The genetic diversity of C. adamantium was characterized using species-specific microsatellites in two different time periods and correlations of these parameters of genetic diversity with the land use and land cover data. (2) Methods: We used 10 microsatellite loci to analyze C. adamantium from five populations, collected in 2011 and 2017. Maps of land use and land cover of the collection sites in both years were generated and subsequently correlated with genetic diversity. (3) Results: No significant loss of genetic diversity was observed in the analyzed period and a positive inbreeding coefficient was observed in all populations. AMOVA and STRUCTURE showed that there is no population structure between years and populations. Significant Pearson correlations were observed in 2017 between parameters of genetic diversity and land use and land cover, with a positive correlation between expected heterozygosity and secondary vegetation, and a negative correlation between inbreeding coefficient and exposed soil. (4) Conclusions: There was no decline in genetic diversity from 2011 to 2017. The high rates of the inbreeding coefficient could lead, for the species, in the long run, to an inbreeding depression as the Cerrado fragmentation might cause a population bottleneck.
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spelling Genetic diversity of campomanesia adamantium and its correlation with land use and land cover© 2021 by the authors. Licensee MDPI, Basel, Switzerland.(1) Background: Campomanesia adamantium is an endemic species of the Cerrado and this biome has been under threat by its constant degradation. The genetic diversity of C. adamantium was characterized using species-specific microsatellites in two different time periods and correlations of these parameters of genetic diversity with the land use and land cover data. (2) Methods: We used 10 microsatellite loci to analyze C. adamantium from five populations, collected in 2011 and 2017. Maps of land use and land cover of the collection sites in both years were generated and subsequently correlated with genetic diversity. (3) Results: No significant loss of genetic diversity was observed in the analyzed period and a positive inbreeding coefficient was observed in all populations. AMOVA and STRUCTURE showed that there is no population structure between years and populations. Significant Pearson correlations were observed in 2017 between parameters of genetic diversity and land use and land cover, with a positive correlation between expected heterozygosity and secondary vegetation, and a negative correlation between inbreeding coefficient and exposed soil. (4) Conclusions: There was no decline in genetic diversity from 2011 to 2017. The high rates of the inbreeding coefficient could lead, for the species, in the long run, to an inbreeding depression as the Cerrado fragmentation might cause a population bottleneck.2024-12-06T11:45:13Z2021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1424-281810.3390/d13040160https://repositorio.udesc.br/handle/UDESC/4204ark:/33523/00130000087fjDiversity134Crispim B.D.A.Fernandes J.S.Zucchi M.I.Batista C.E.A.Bajay, Miklos MaximilianoVieira M.D.C.Barufatti A.engreponame:Repositório Institucional da Udescinstname:Universidade do Estado de Santa Catarina (UDESC)instacron:UDESCinfo:eu-repo/semantics/openAccess2024-12-07T20:43:56Zoai:repositorio.udesc.br:UDESC/4204Biblioteca Digital de Teses e Dissertaçõeshttps://pergamumweb.udesc.br/biblioteca/index.phpPRIhttps://repositorio-api.udesc.br/server/oai/requestri@udesc.bropendoar:63912024-12-07T20:43:56Repositório Institucional da Udesc - Universidade do Estado de Santa Catarina (UDESC)false
dc.title.none.fl_str_mv Genetic diversity of campomanesia adamantium and its correlation with land use and land cover
title Genetic diversity of campomanesia adamantium and its correlation with land use and land cover
spellingShingle Genetic diversity of campomanesia adamantium and its correlation with land use and land cover
Crispim B.D.A.
title_short Genetic diversity of campomanesia adamantium and its correlation with land use and land cover
title_full Genetic diversity of campomanesia adamantium and its correlation with land use and land cover
title_fullStr Genetic diversity of campomanesia adamantium and its correlation with land use and land cover
title_full_unstemmed Genetic diversity of campomanesia adamantium and its correlation with land use and land cover
title_sort Genetic diversity of campomanesia adamantium and its correlation with land use and land cover
author Crispim B.D.A.
author_facet Crispim B.D.A.
Fernandes J.S.
Zucchi M.I.
Batista C.E.A.
Bajay, Miklos Maximiliano
Vieira M.D.C.
Barufatti A.
author_role author
author2 Fernandes J.S.
Zucchi M.I.
Batista C.E.A.
Bajay, Miklos Maximiliano
Vieira M.D.C.
Barufatti A.
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Crispim B.D.A.
Fernandes J.S.
Zucchi M.I.
Batista C.E.A.
Bajay, Miklos Maximiliano
Vieira M.D.C.
Barufatti A.
description © 2021 by the authors. Licensee MDPI, Basel, Switzerland.(1) Background: Campomanesia adamantium is an endemic species of the Cerrado and this biome has been under threat by its constant degradation. The genetic diversity of C. adamantium was characterized using species-specific microsatellites in two different time periods and correlations of these parameters of genetic diversity with the land use and land cover data. (2) Methods: We used 10 microsatellite loci to analyze C. adamantium from five populations, collected in 2011 and 2017. Maps of land use and land cover of the collection sites in both years were generated and subsequently correlated with genetic diversity. (3) Results: No significant loss of genetic diversity was observed in the analyzed period and a positive inbreeding coefficient was observed in all populations. AMOVA and STRUCTURE showed that there is no population structure between years and populations. Significant Pearson correlations were observed in 2017 between parameters of genetic diversity and land use and land cover, with a positive correlation between expected heterozygosity and secondary vegetation, and a negative correlation between inbreeding coefficient and exposed soil. (4) Conclusions: There was no decline in genetic diversity from 2011 to 2017. The high rates of the inbreeding coefficient could lead, for the species, in the long run, to an inbreeding depression as the Cerrado fragmentation might cause a population bottleneck.
publishDate 2021
dc.date.none.fl_str_mv 2021
2024-12-06T11:45:13Z
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dc.identifier.uri.fl_str_mv 1424-2818
10.3390/d13040160
https://repositorio.udesc.br/handle/UDESC/4204
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identifier_str_mv 1424-2818
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dc.language.iso.fl_str_mv eng
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dc.relation.none.fl_str_mv Diversity
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instname:Universidade do Estado de Santa Catarina (UDESC)
instacron:UDESC
instname_str Universidade do Estado de Santa Catarina (UDESC)
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reponame_str Repositório Institucional da Udesc
collection Repositório Institucional da Udesc
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