Fully Automatic 3D-TEE Segmentation for the Planning of Transcatheter Aortic Valve Implantation
Main Author: | |
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Publication Date: | 2017 |
Other Authors: | , , , , , , |
Format: | Article |
Language: | eng |
Source: | Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
Download full: | https://hdl.handle.net/1822/49658 |
Summary: | A novel fully automatic framework for aortic valve (AV) trunk segmentation in three-dimensional (3-D) transesophageal echocardiography (TEE) datasets is proposed. The methodology combines a previously presented semiautomatic segmentation strategy by using shape-based B-spline Explicit Active Surfaces with two novel algorithms to automate the quantification of relevant AV measures. The first combines a fast rotation-invariant 3-D generalized Hough transform with a vessel-like dark tube detector to initialize the segmentation. After segmenting the AV wall, the second algorithm focuses on aligning this surface with the reference ones in order to estimate the short-axis (SAx) planes (at the left ventricular outflow tract, annulus, sinuses of Valsalva, and sinotubular junction) in which to perform the measurements. The framework has been tested in 20 3-D-TEE datasets with both stenotic and nonstenotic AVs. The initialization algorithm presented a median error of around 3 mm for the AV axis endpoints, with an overall feasibility of 90%. In its turn, the SAx detection algorithm showed to be highly reproducible, with indistinguishable results compared with the variability found between the experts' defined planes. Automatically extracted measures at the four levels showed a good agreement with the experts' ones, with limits of agreement similar to the interobserver variability. Moreover, a validation set of 20 additional stenotic AV datasets corroborated the method's applicability and accuracy. The proposed approach mitigates the variability associated with the manual quantification while significantly reducing the required analysis time (12 s versus 5 to 10 min), which shows its appeal for automatic dimensioning of the AV morphology in 3-D-TEE for the planning of transcatheter AV implantation. |
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Fully Automatic 3D-TEE Segmentation for the Planning of Transcatheter Aortic Valve ImplantationAortic valve (AV) segmentationAutomatic initializationFully automatic quantificationTranscatheter aortic valve implantation3-D transesophageal echocardio-graphy (TEE)Ciências Médicas::Biotecnologia MédicaScience & TechnologyA novel fully automatic framework for aortic valve (AV) trunk segmentation in three-dimensional (3-D) transesophageal echocardiography (TEE) datasets is proposed. The methodology combines a previously presented semiautomatic segmentation strategy by using shape-based B-spline Explicit Active Surfaces with two novel algorithms to automate the quantification of relevant AV measures. The first combines a fast rotation-invariant 3-D generalized Hough transform with a vessel-like dark tube detector to initialize the segmentation. After segmenting the AV wall, the second algorithm focuses on aligning this surface with the reference ones in order to estimate the short-axis (SAx) planes (at the left ventricular outflow tract, annulus, sinuses of Valsalva, and sinotubular junction) in which to perform the measurements. The framework has been tested in 20 3-D-TEE datasets with both stenotic and nonstenotic AVs. The initialization algorithm presented a median error of around 3 mm for the AV axis endpoints, with an overall feasibility of 90%. In its turn, the SAx detection algorithm showed to be highly reproducible, with indistinguishable results compared with the variability found between the experts' defined planes. Automatically extracted measures at the four levels showed a good agreement with the experts' ones, with limits of agreement similar to the interobserver variability. Moreover, a validation set of 20 additional stenotic AV datasets corroborated the method's applicability and accuracy. The proposed approach mitigates the variability associated with the manual quantification while significantly reducing the required analysis time (12 s versus 5 to 10 min), which shows its appeal for automatic dimensioning of the AV morphology in 3-D-TEE for the planning of transcatheter AV implantation.This work was supported by the project "ON.2 SR&TD Integrated Program (Norte-07-0124-FEDER-000017)" cofunded by the Programa Operacional Regional do Norte (ON.2- O Novo Norte), Quadro de Referencia Estrategico Nacional, through Fundo Europeu de Desenvolvimento Regional. The work of S. Queiros and P. Morais was supported by the FCT-Fundacao para a Ciencia e a Tecnologia and the European Social Found through the Programa Operacional Capital Humano in the scope of the Ph.D. Grants SFRH/BD/93443/2013 and SFRH/BD/95438/2013, respectively. J. L. Vilaca and J. D'hooge are joint last authors. Asterisk indicates corresponding author.info:eu-repo/semantics/publishedVersionInstitute of Electrical and Electronics Engineers (IEEE)Universidade do MinhoQueirós, Sandro Filipe MonteiroPapachristidis, AlexandrosMorais, Pedro André GonçalvesTheodoropoulos, Konstantinos C.Fonseca, Jaime C.Monaghan, Mark J.Vilaça, João L.D’hooge, Jan2017-08-032017-08-03T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/49658engQueirós, S., Papachristidis, A., Morais, P., Theodoropoulos, K. C., Fonseca, J. C., Monaghan, M. J., ... & D’hooge, J. (2017). Fully Automatic 3-D-TEE Segmentation for the Planning of Transcatheter Aortic Valve Implantation. IEEE Transactions on Biomedical Engineering, 64(8), 1711-17200018-929410.1109/TBME.2016.261740128113205http://ieeexplore.ieee.org/abstract/document/7590022/?reload=trueinfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-05-11T05:48:43Zoai:repositorium.sdum.uminho.pt:1822/49658Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T15:31:07.629399Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse |
dc.title.none.fl_str_mv |
Fully Automatic 3D-TEE Segmentation for the Planning of Transcatheter Aortic Valve Implantation |
title |
Fully Automatic 3D-TEE Segmentation for the Planning of Transcatheter Aortic Valve Implantation |
spellingShingle |
Fully Automatic 3D-TEE Segmentation for the Planning of Transcatheter Aortic Valve Implantation Queirós, Sandro Filipe Monteiro Aortic valve (AV) segmentation Automatic initialization Fully automatic quantification Transcatheter aortic valve implantation 3-D transesophageal echocardio-graphy (TEE) Ciências Médicas::Biotecnologia Médica Science & Technology |
title_short |
Fully Automatic 3D-TEE Segmentation for the Planning of Transcatheter Aortic Valve Implantation |
title_full |
Fully Automatic 3D-TEE Segmentation for the Planning of Transcatheter Aortic Valve Implantation |
title_fullStr |
Fully Automatic 3D-TEE Segmentation for the Planning of Transcatheter Aortic Valve Implantation |
title_full_unstemmed |
Fully Automatic 3D-TEE Segmentation for the Planning of Transcatheter Aortic Valve Implantation |
title_sort |
Fully Automatic 3D-TEE Segmentation for the Planning of Transcatheter Aortic Valve Implantation |
author |
Queirós, Sandro Filipe Monteiro |
author_facet |
Queirós, Sandro Filipe Monteiro Papachristidis, Alexandros Morais, Pedro André Gonçalves Theodoropoulos, Konstantinos C. Fonseca, Jaime C. Monaghan, Mark J. Vilaça, João L. D’hooge, Jan |
author_role |
author |
author2 |
Papachristidis, Alexandros Morais, Pedro André Gonçalves Theodoropoulos, Konstantinos C. Fonseca, Jaime C. Monaghan, Mark J. Vilaça, João L. D’hooge, Jan |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Queirós, Sandro Filipe Monteiro Papachristidis, Alexandros Morais, Pedro André Gonçalves Theodoropoulos, Konstantinos C. Fonseca, Jaime C. Monaghan, Mark J. Vilaça, João L. D’hooge, Jan |
dc.subject.por.fl_str_mv |
Aortic valve (AV) segmentation Automatic initialization Fully automatic quantification Transcatheter aortic valve implantation 3-D transesophageal echocardio-graphy (TEE) Ciências Médicas::Biotecnologia Médica Science & Technology |
topic |
Aortic valve (AV) segmentation Automatic initialization Fully automatic quantification Transcatheter aortic valve implantation 3-D transesophageal echocardio-graphy (TEE) Ciências Médicas::Biotecnologia Médica Science & Technology |
description |
A novel fully automatic framework for aortic valve (AV) trunk segmentation in three-dimensional (3-D) transesophageal echocardiography (TEE) datasets is proposed. The methodology combines a previously presented semiautomatic segmentation strategy by using shape-based B-spline Explicit Active Surfaces with two novel algorithms to automate the quantification of relevant AV measures. The first combines a fast rotation-invariant 3-D generalized Hough transform with a vessel-like dark tube detector to initialize the segmentation. After segmenting the AV wall, the second algorithm focuses on aligning this surface with the reference ones in order to estimate the short-axis (SAx) planes (at the left ventricular outflow tract, annulus, sinuses of Valsalva, and sinotubular junction) in which to perform the measurements. The framework has been tested in 20 3-D-TEE datasets with both stenotic and nonstenotic AVs. The initialization algorithm presented a median error of around 3 mm for the AV axis endpoints, with an overall feasibility of 90%. In its turn, the SAx detection algorithm showed to be highly reproducible, with indistinguishable results compared with the variability found between the experts' defined planes. Automatically extracted measures at the four levels showed a good agreement with the experts' ones, with limits of agreement similar to the interobserver variability. Moreover, a validation set of 20 additional stenotic AV datasets corroborated the method's applicability and accuracy. The proposed approach mitigates the variability associated with the manual quantification while significantly reducing the required analysis time (12 s versus 5 to 10 min), which shows its appeal for automatic dimensioning of the AV morphology in 3-D-TEE for the planning of transcatheter AV implantation. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-08-03 2017-08-03T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://hdl.handle.net/1822/49658 |
url |
https://hdl.handle.net/1822/49658 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Queirós, S., Papachristidis, A., Morais, P., Theodoropoulos, K. C., Fonseca, J. C., Monaghan, M. J., ... & D’hooge, J. (2017). Fully Automatic 3-D-TEE Segmentation for the Planning of Transcatheter Aortic Valve Implantation. IEEE Transactions on Biomedical Engineering, 64(8), 1711-1720 0018-9294 10.1109/TBME.2016.2617401 28113205 http://ieeexplore.ieee.org/abstract/document/7590022/?reload=true |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
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openAccess |
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application/pdf |
dc.publisher.none.fl_str_mv |
Institute of Electrical and Electronics Engineers (IEEE) |
publisher.none.fl_str_mv |
Institute of Electrical and Electronics Engineers (IEEE) |
dc.source.none.fl_str_mv |
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