Comparison of the serum whole molecular composition with the serum metabolome to acquire the pathophysiological state
Main Author: | |
---|---|
Publication Date: | 2024 |
Other Authors: | , , , , , , , , |
Language: | eng |
Source: | Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
Download full: | http://hdl.handle.net/10400.21/21760 |
Summary: | Omics Sciences serve as an essential tool to advance precision medicine. Since conventional omics sciences rely on laborious, complex and time-consuming analytical processes, this study evaluated whether the serum molecular fingerprint, captured by FTIR spectroscopy, could predict mortality risk in critically ill patients. Both the whole serum and the serum metabolome (i.e., serum after removal of macromolecules) were analyzed. PCA-LDA models demonstrated strong performance in predicting patients’ pathophysiological state. A significantly more accurate model for predicting the patients’ pathophysiological state was achieved using the serum metabolome (94%) compared to the whole serum (81%). This is consistent with metabolomics, which provides a more direct view of the systems’ functionality. These promising results highlight the importance of FTIR spectroscopy analysis of the serum metabolome, offering a rapid, cost-effective, and high-throughput method for assessing patients' pathophysiological state. |
id |
RCAP_8324afd4ca4330775b88a53495d73c4c |
---|---|
oai_identifier_str |
oai:repositorio.ipl.pt:10400.21/21760 |
network_acronym_str |
RCAP |
network_name_str |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
repository_id_str |
https://opendoar.ac.uk/repository/7160 |
spelling |
Comparison of the serum whole molecular composition with the serum metabolome to acquire the pathophysiological stateBiomarkersFTIR spectroscopyMetabolomeIntensive care unitOmics Sciences serve as an essential tool to advance precision medicine. Since conventional omics sciences rely on laborious, complex and time-consuming analytical processes, this study evaluated whether the serum molecular fingerprint, captured by FTIR spectroscopy, could predict mortality risk in critically ill patients. Both the whole serum and the serum metabolome (i.e., serum after removal of macromolecules) were analyzed. PCA-LDA models demonstrated strong performance in predicting patients’ pathophysiological state. A significantly more accurate model for predicting the patients’ pathophysiological state was achieved using the serum metabolome (94%) compared to the whole serum (81%). This is consistent with metabolomics, which provides a more direct view of the systems’ functionality. These promising results highlight the importance of FTIR spectroscopy analysis of the serum metabolome, offering a rapid, cost-effective, and high-throughput method for assessing patients' pathophysiological state.EARETDomingues, NunoTomar, Rajesh SinghMahamud, TosapornRCIPLCorreia, InêsHenrique Fonseca, Tiago AlexandrePataco, JéssicaOliveira, MafaldaCaldeira, VivianaDomingues, N.Von Rekowski, CristianaAraújo, Rúben Alexandre DinisBento, LuísCalado, Cecília2025-04-07T07:18:32Z2024-122024-12-01T00:00:00Zconference paperinfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://hdl.handle.net/10400.21/21760eng978-989-9121-43-010.17758/EARES19info:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2025-04-09T02:16:19Zoai:repositorio.ipl.pt:10400.21/21760Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-29T06:21:25.390773Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse |
dc.title.none.fl_str_mv |
Comparison of the serum whole molecular composition with the serum metabolome to acquire the pathophysiological state |
title |
Comparison of the serum whole molecular composition with the serum metabolome to acquire the pathophysiological state |
spellingShingle |
Comparison of the serum whole molecular composition with the serum metabolome to acquire the pathophysiological state Correia, Inês Biomarkers FTIR spectroscopy Metabolome Intensive care unit |
title_short |
Comparison of the serum whole molecular composition with the serum metabolome to acquire the pathophysiological state |
title_full |
Comparison of the serum whole molecular composition with the serum metabolome to acquire the pathophysiological state |
title_fullStr |
Comparison of the serum whole molecular composition with the serum metabolome to acquire the pathophysiological state |
title_full_unstemmed |
Comparison of the serum whole molecular composition with the serum metabolome to acquire the pathophysiological state |
title_sort |
Comparison of the serum whole molecular composition with the serum metabolome to acquire the pathophysiological state |
author |
Correia, Inês |
author_facet |
Correia, Inês Henrique Fonseca, Tiago Alexandre Pataco, Jéssica Oliveira, Mafalda Caldeira, Viviana Domingues, N. Von Rekowski, Cristiana Araújo, Rúben Alexandre Dinis Bento, Luís Calado, Cecília |
author_role |
author |
author2 |
Henrique Fonseca, Tiago Alexandre Pataco, Jéssica Oliveira, Mafalda Caldeira, Viviana Domingues, N. Von Rekowski, Cristiana Araújo, Rúben Alexandre Dinis Bento, Luís Calado, Cecília |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Domingues, Nuno Tomar, Rajesh Singh Mahamud, Tosaporn RCIPL |
dc.contributor.author.fl_str_mv |
Correia, Inês Henrique Fonseca, Tiago Alexandre Pataco, Jéssica Oliveira, Mafalda Caldeira, Viviana Domingues, N. Von Rekowski, Cristiana Araújo, Rúben Alexandre Dinis Bento, Luís Calado, Cecília |
dc.subject.por.fl_str_mv |
Biomarkers FTIR spectroscopy Metabolome Intensive care unit |
topic |
Biomarkers FTIR spectroscopy Metabolome Intensive care unit |
description |
Omics Sciences serve as an essential tool to advance precision medicine. Since conventional omics sciences rely on laborious, complex and time-consuming analytical processes, this study evaluated whether the serum molecular fingerprint, captured by FTIR spectroscopy, could predict mortality risk in critically ill patients. Both the whole serum and the serum metabolome (i.e., serum after removal of macromolecules) were analyzed. PCA-LDA models demonstrated strong performance in predicting patients’ pathophysiological state. A significantly more accurate model for predicting the patients’ pathophysiological state was achieved using the serum metabolome (94%) compared to the whole serum (81%). This is consistent with metabolomics, which provides a more direct view of the systems’ functionality. These promising results highlight the importance of FTIR spectroscopy analysis of the serum metabolome, offering a rapid, cost-effective, and high-throughput method for assessing patients' pathophysiological state. |
publishDate |
2024 |
dc.date.none.fl_str_mv |
2024-12 2024-12-01T00:00:00Z 2025-04-07T07:18:32Z |
dc.type.driver.fl_str_mv |
conference paper |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.21/21760 |
url |
http://hdl.handle.net/10400.21/21760 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
978-989-9121-43-0 10.17758/EARES19 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
EARET |
publisher.none.fl_str_mv |
EARET |
dc.source.none.fl_str_mv |
reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia instacron:RCAAP |
instname_str |
FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
collection |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
repository.name.fl_str_mv |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia |
repository.mail.fl_str_mv |
info@rcaap.pt |
_version_ |
1833602662328696832 |