Machine Learning-based Prediction Model for Treatment of Acromegaly with First-generation Somatostatin Receptor Ligands

Detalhes bibliográficos
Autor(a) principal: Wildemberg, Luiz Eduardo
Data de Publicação: 2021
Outros Autores: Da Silva Camacho, Aline Helen, Miranda, Renan Lyra, Elias, Paula C. L, De Castro Musolino, Nina R, Nazato, Debora, Jallad, Raquel, Huayllas, Martha K. P, Mota, Jose Italo S, Almeida, Tobias, Portes, Evandro, Ribeiro-Oliveira, Antonio, Vilar, Lucio, Boguszewski, Cesar Luiz, Winter Tavares, Ana Beatriz, Nunes-Nogueira, Vania S [UNESP], Mazzuco, Tânia Longo, Rech, Carolina Garcia Soares Leães, Marques, Nelma Veronica, Chimelli, Leila, Czepielewski, Mauro, Bronstein, Marcello D, Abucham, Julio, De Castro, Margaret, Kasuki, Leandro, Gadelha, Mônica
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1210/clinem/dgab125
http://hdl.handle.net/11449/229017
Resumo: Context: Artificial intelligence (AI), in particular machine learning (ML), may be used to deeply analyze biomarkers of response to first-generation somatostatin receptor ligands (fg-SRLs) in the treatment of acromegaly. Objective: To develop a prediction model of therapeutic response of acromegaly to fg-SRL. Methods: Patients with acromegaly not cured by primary surgical treatment and who had adjuvant therapy with fg-SRL for at least 6 months after surgery were included. Patients were considered controlled if they presented growth hormone (GH) <1.0 ng/mL and normal age-adjusted insulin-like growth factor (IGF)-I levels. Six AI models were evaluated: logistic regression, k-nearest neighbor classifier, support vector machine, gradient-boosted classifier, random forest, and multilayer perceptron. The features included in the analysis were age at diagnosis, sex, GH, and IGF-I levels at diagnosis and at pretreatment, somatostatin receptor subtype 2 and 5 (SST2 and SST5) protein expression and cytokeratin granulation pattern (GP). Results: A total of 153 patients were analyzed. Controlled patients were older (P=.002), had lower GH at diagnosis (P=.01), had lower pretreatment GH and IGF-I (P<.001), and more frequently harbored tumors that were densely granulated (P=.014) or highly expressed SST2 (P<.001). The model that performed best was the support vector machine with the features SST2, SST5, GP, sex, age, and pretreatment GH and IGF-I levels. It had an accuracy of 86.3%, positive predictive value of 83.3% and negative predictive value of 87.5%. Conclusion: We developed a ML-based prediction model with high accuracy that has the potential to improve medical management of acromegaly, optimize biochemical control, decrease long-term morbidities and mortality, and reduce health services costs.
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spelling Machine Learning-based Prediction Model for Treatment of Acromegaly with First-generation Somatostatin Receptor Ligandsacromegalybiomarkermachine learningprecision medicineprediction modelsomatostatin receptorsomatostatin receptor ligandsContext: Artificial intelligence (AI), in particular machine learning (ML), may be used to deeply analyze biomarkers of response to first-generation somatostatin receptor ligands (fg-SRLs) in the treatment of acromegaly. Objective: To develop a prediction model of therapeutic response of acromegaly to fg-SRL. Methods: Patients with acromegaly not cured by primary surgical treatment and who had adjuvant therapy with fg-SRL for at least 6 months after surgery were included. Patients were considered controlled if they presented growth hormone (GH) <1.0 ng/mL and normal age-adjusted insulin-like growth factor (IGF)-I levels. Six AI models were evaluated: logistic regression, k-nearest neighbor classifier, support vector machine, gradient-boosted classifier, random forest, and multilayer perceptron. The features included in the analysis were age at diagnosis, sex, GH, and IGF-I levels at diagnosis and at pretreatment, somatostatin receptor subtype 2 and 5 (SST2 and SST5) protein expression and cytokeratin granulation pattern (GP). Results: A total of 153 patients were analyzed. Controlled patients were older (P=.002), had lower GH at diagnosis (P=.01), had lower pretreatment GH and IGF-I (P<.001), and more frequently harbored tumors that were densely granulated (P=.014) or highly expressed SST2 (P<.001). The model that performed best was the support vector machine with the features SST2, SST5, GP, sex, age, and pretreatment GH and IGF-I levels. It had an accuracy of 86.3%, positive predictive value of 83.3% and negative predictive value of 87.5%. Conclusion: We developed a ML-based prediction model with high accuracy that has the potential to improve medical management of acromegaly, optimize biochemical control, decrease long-term morbidities and mortality, and reduce health services costs.Endocrine Unit and Neuroendocrinology Research Center Med. Sch. and Hospital Universitario Clementino Fraga Filho - Universidade Federal Do Rio de Janeiro, RJNeuroendocrine Unit - Instituto Estadual Do Cérebro Paulo Niemeyer Secretaria Estadual de Saúde, RJNeuropathology and Molecular Genetics Laboratory Instituto Estadual Do Cérebro Paulo Niemeyer Secretaria Estadual de Saúde, RJDivision of Endocrinology - Department of Internal Medicine Ribeirao Preto Medical School - University of Sao Paulo, SPNeuroendocrine Unit Division of Functional Neurosurgery Hospital das Clinicas Faculdade de Medicina Universidade de São Paulo, SPNeuroendocrine U. - Div. of Endocrinol. and Metab. - Esc. Paulista de Med. - Univ. Fed. de Sao Paulo, SPNeuroendocrine Unit Division of Endocrinology and Metabolism Hospital das Clínicas University of São Paulo Medical School, SPCellular and Molecular Endocrinology Laboratory/LIM25 Discipline of Endocrinology Hospital das Clinicas HCFMUSP Faculty of Medicine University of Sao Paulo, SPNeuroendocrinology and Neurosurgery Unit Hospital Brigadeiro, SPEndocrinology and Metabolism Unit Hospital Geral de Fortaleza Secretaria Estadual de Saúde, CEDivision of Endocrinology Hospital de Clinicas de Porto Alegre (UFRGS), RS,AlegreInstitute of Medical Assistance to the State Public HospitalFaculdade de Medicina Universidade Federal de Minas Gerais, MGNeuroendocrine Unit Division of Endocrinology and Metabolism Hospital das Clínicas Federal University of Pernambuco Medical School, PEEndocrine Division (SEMPR) Department of Internal Medicine Universidade Federal Do Parana, PREndocrine Unit - Department of Internal Medicine Faculty of Medical Sciences Universidade Do Estado Do Rio de JaneiroDepartment of Internal Medicine São Paulo State University/UNESP Medical School, SPDivision of Endocrinology of Medical Clinical Department Universidade Estadual de Londrina (UEL), PRSanta Casa de Porto Alegre, RSDepartment of Internal Medicine São Paulo State University/UNESP Medical School, SPUniversidade Federal do Rio de Janeiro (UFRJ)Secretaria Estadual de SaúdeUniversidade de São Paulo (USP)Universidade Federal de São Paulo (UNIFESP)Neuroendocrinology and Neurosurgery Unit Hospital BrigadeiroHospital de Clinicas de Porto Alegre (UFRGS)Institute of Medical Assistance to the State Public HospitalUniversidade Federal de Minas Gerais (UFMG)Universidade Federal de Pernambuco (UFPE)Universidade Federal Do ParanaUniversidade do Estado do Rio de Janeiro (UERJ)Universidade Estadual Paulista (UNESP)Universidade Estadual de Londrina (UEL)Santa Casa de Porto AlegreWildemberg, Luiz EduardoDa Silva Camacho, Aline HelenMiranda, Renan LyraElias, Paula C. LDe Castro Musolino, Nina RNazato, DeboraJallad, RaquelHuayllas, Martha K. PMota, Jose Italo SAlmeida, TobiasPortes, EvandroRibeiro-Oliveira, AntonioVilar, LucioBoguszewski, Cesar LuizWinter Tavares, Ana BeatrizNunes-Nogueira, Vania S [UNESP]Mazzuco, Tânia LongoRech, Carolina Garcia Soares LeãesMarques, Nelma VeronicaChimelli, LeilaCzepielewski, MauroBronstein, Marcello DAbucham, JulioDe Castro, MargaretKasuki, LeandroGadelha, Mônica2022-04-29T08:29:59Z2022-04-29T08:29:59Z2021-07-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article2047-2056http://dx.doi.org/10.1210/clinem/dgab125Journal of Clinical Endocrinology and Metabolism, v. 106, n. 7, p. 2047-2056, 2021.1945-71970021-972Xhttp://hdl.handle.net/11449/22901710.1210/clinem/dgab1252-s2.0-85108385985Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Clinical Endocrinology and Metabolisminfo:eu-repo/semantics/openAccess2024-08-14T17:36:31Zoai:repositorio.unesp.br:11449/229017Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-08-14T17:36:31Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Machine Learning-based Prediction Model for Treatment of Acromegaly with First-generation Somatostatin Receptor Ligands
title Machine Learning-based Prediction Model for Treatment of Acromegaly with First-generation Somatostatin Receptor Ligands
spellingShingle Machine Learning-based Prediction Model for Treatment of Acromegaly with First-generation Somatostatin Receptor Ligands
Wildemberg, Luiz Eduardo
acromegaly
biomarker
machine learning
precision medicine
prediction model
somatostatin receptor
somatostatin receptor ligands
title_short Machine Learning-based Prediction Model for Treatment of Acromegaly with First-generation Somatostatin Receptor Ligands
title_full Machine Learning-based Prediction Model for Treatment of Acromegaly with First-generation Somatostatin Receptor Ligands
title_fullStr Machine Learning-based Prediction Model for Treatment of Acromegaly with First-generation Somatostatin Receptor Ligands
title_full_unstemmed Machine Learning-based Prediction Model for Treatment of Acromegaly with First-generation Somatostatin Receptor Ligands
title_sort Machine Learning-based Prediction Model for Treatment of Acromegaly with First-generation Somatostatin Receptor Ligands
author Wildemberg, Luiz Eduardo
author_facet Wildemberg, Luiz Eduardo
Da Silva Camacho, Aline Helen
Miranda, Renan Lyra
Elias, Paula C. L
De Castro Musolino, Nina R
Nazato, Debora
Jallad, Raquel
Huayllas, Martha K. P
Mota, Jose Italo S
Almeida, Tobias
Portes, Evandro
Ribeiro-Oliveira, Antonio
Vilar, Lucio
Boguszewski, Cesar Luiz
Winter Tavares, Ana Beatriz
Nunes-Nogueira, Vania S [UNESP]
Mazzuco, Tânia Longo
Rech, Carolina Garcia Soares Leães
Marques, Nelma Veronica
Chimelli, Leila
Czepielewski, Mauro
Bronstein, Marcello D
Abucham, Julio
De Castro, Margaret
Kasuki, Leandro
Gadelha, Mônica
author_role author
author2 Da Silva Camacho, Aline Helen
Miranda, Renan Lyra
Elias, Paula C. L
De Castro Musolino, Nina R
Nazato, Debora
Jallad, Raquel
Huayllas, Martha K. P
Mota, Jose Italo S
Almeida, Tobias
Portes, Evandro
Ribeiro-Oliveira, Antonio
Vilar, Lucio
Boguszewski, Cesar Luiz
Winter Tavares, Ana Beatriz
Nunes-Nogueira, Vania S [UNESP]
Mazzuco, Tânia Longo
Rech, Carolina Garcia Soares Leães
Marques, Nelma Veronica
Chimelli, Leila
Czepielewski, Mauro
Bronstein, Marcello D
Abucham, Julio
De Castro, Margaret
Kasuki, Leandro
Gadelha, Mônica
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal do Rio de Janeiro (UFRJ)
Secretaria Estadual de Saúde
Universidade de São Paulo (USP)
Universidade Federal de São Paulo (UNIFESP)
Neuroendocrinology and Neurosurgery Unit Hospital Brigadeiro
Hospital de Clinicas de Porto Alegre (UFRGS)
Institute of Medical Assistance to the State Public Hospital
Universidade Federal de Minas Gerais (UFMG)
Universidade Federal de Pernambuco (UFPE)
Universidade Federal Do Parana
Universidade do Estado do Rio de Janeiro (UERJ)
Universidade Estadual Paulista (UNESP)
Universidade Estadual de Londrina (UEL)
Santa Casa de Porto Alegre
dc.contributor.author.fl_str_mv Wildemberg, Luiz Eduardo
Da Silva Camacho, Aline Helen
Miranda, Renan Lyra
Elias, Paula C. L
De Castro Musolino, Nina R
Nazato, Debora
Jallad, Raquel
Huayllas, Martha K. P
Mota, Jose Italo S
Almeida, Tobias
Portes, Evandro
Ribeiro-Oliveira, Antonio
Vilar, Lucio
Boguszewski, Cesar Luiz
Winter Tavares, Ana Beatriz
Nunes-Nogueira, Vania S [UNESP]
Mazzuco, Tânia Longo
Rech, Carolina Garcia Soares Leães
Marques, Nelma Veronica
Chimelli, Leila
Czepielewski, Mauro
Bronstein, Marcello D
Abucham, Julio
De Castro, Margaret
Kasuki, Leandro
Gadelha, Mônica
dc.subject.por.fl_str_mv acromegaly
biomarker
machine learning
precision medicine
prediction model
somatostatin receptor
somatostatin receptor ligands
topic acromegaly
biomarker
machine learning
precision medicine
prediction model
somatostatin receptor
somatostatin receptor ligands
description Context: Artificial intelligence (AI), in particular machine learning (ML), may be used to deeply analyze biomarkers of response to first-generation somatostatin receptor ligands (fg-SRLs) in the treatment of acromegaly. Objective: To develop a prediction model of therapeutic response of acromegaly to fg-SRL. Methods: Patients with acromegaly not cured by primary surgical treatment and who had adjuvant therapy with fg-SRL for at least 6 months after surgery were included. Patients were considered controlled if they presented growth hormone (GH) <1.0 ng/mL and normal age-adjusted insulin-like growth factor (IGF)-I levels. Six AI models were evaluated: logistic regression, k-nearest neighbor classifier, support vector machine, gradient-boosted classifier, random forest, and multilayer perceptron. The features included in the analysis were age at diagnosis, sex, GH, and IGF-I levels at diagnosis and at pretreatment, somatostatin receptor subtype 2 and 5 (SST2 and SST5) protein expression and cytokeratin granulation pattern (GP). Results: A total of 153 patients were analyzed. Controlled patients were older (P=.002), had lower GH at diagnosis (P=.01), had lower pretreatment GH and IGF-I (P<.001), and more frequently harbored tumors that were densely granulated (P=.014) or highly expressed SST2 (P<.001). The model that performed best was the support vector machine with the features SST2, SST5, GP, sex, age, and pretreatment GH and IGF-I levels. It had an accuracy of 86.3%, positive predictive value of 83.3% and negative predictive value of 87.5%. Conclusion: We developed a ML-based prediction model with high accuracy that has the potential to improve medical management of acromegaly, optimize biochemical control, decrease long-term morbidities and mortality, and reduce health services costs.
publishDate 2021
dc.date.none.fl_str_mv 2021-07-01
2022-04-29T08:29:59Z
2022-04-29T08:29:59Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1210/clinem/dgab125
Journal of Clinical Endocrinology and Metabolism, v. 106, n. 7, p. 2047-2056, 2021.
1945-7197
0021-972X
http://hdl.handle.net/11449/229017
10.1210/clinem/dgab125
2-s2.0-85108385985
url http://dx.doi.org/10.1210/clinem/dgab125
http://hdl.handle.net/11449/229017
identifier_str_mv Journal of Clinical Endocrinology and Metabolism, v. 106, n. 7, p. 2047-2056, 2021.
1945-7197
0021-972X
10.1210/clinem/dgab125
2-s2.0-85108385985
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Clinical Endocrinology and Metabolism
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 2047-2056
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
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