Repetitive DNA Mapping in Five Genera of Tree Frogs (Amphibia: Anura) from the Atlantic Forest: New Highlights on Genomic Organization in Hylidae

Bibliographic Details
Main Author: Souza, Késsia Leite
Publication Date: 2024
Other Authors: Melo, Silvana [UNESP], Peixoto, Marco Antônio, Travenzoli, Natália Martins, Feio, Renato Neves, Dergam, Jorge Abdala
Format: Article
Language: eng
Source: Repositório Institucional da UNESP
Download full: http://dx.doi.org/10.1159/000537875
https://hdl.handle.net/11449/302003
Summary: Introduction: The tribes Cophomantini, Scinaxini, and Dendropsophini are anurans that belong to Hylidae, with wide distribution in tropical and subtropical regions around the world. The taxonomy and systematics of this family remain in a state of ongoing revision. Previous cytogenetic analyses of genera Boana, Bokermannohyla, Ololygon, Scinax, and Dendropsophus described some karyotypic characters such as conventional staining, C-banding and NORs, and FISH with specific probes. Methods: This study describes for the first time the karyotypes of four species: Bokermannohyla ibitipoca, Ololygon luizotavioi, Dendropsophus bipunctatus, and Dendropsophus ruschii. Furthermore, wemap CA(15) and CAT(10) microsatellite sites for the aforementioned species and six more species from the same genera for insight into the chromosomal evolution within the subfamily Hyalinae. Results: B. ibitipoca and O. luizotavioi had 2n = 24 and karyotypic formulas 18m + 4sm + 2st and 8m + 12sm + 4st, while D. bipunctatus and D. ruschii showed 2n = 30 and karyotypic formulas 12m + 12sm+ 4st + 2t and 10m + 10sm + 6st + 4t, respectively. The diploid numbers and karyotypic formulas revealed here follow the previously reported trend for Hylidae, except B. ibitipoca has a particularity of eight metacentric chromosomes, more than what is commonly found in species of this genus. The microsatellites probes CA(15) and CAT(10) had markings accumulated in blocks in the centromeric, pericentromeric, and terminal regions that were more specific for some species, as well as markings scattered along the chromosomes. We present a comprehensive review table of current data on cytogenetics of these genera. Conclusion: Our findings showed that the karyotypes of the hylids studied here majority fit the postulated conserved diploid number (2n = 24) and morphological chromosome patterns, while the mapping of the microsatellites enabled us to detect differences between species that share similar chromosomal morphologies.
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spelling Repetitive DNA Mapping in Five Genera of Tree Frogs (Amphibia: Anura) from the Atlantic Forest: New Highlights on Genomic Organization in HylidaeChromosomal evolutionFluorescent in situ hybridizationMicrosatelliteRepetitive DNATandem repeatsIntroduction: The tribes Cophomantini, Scinaxini, and Dendropsophini are anurans that belong to Hylidae, with wide distribution in tropical and subtropical regions around the world. The taxonomy and systematics of this family remain in a state of ongoing revision. Previous cytogenetic analyses of genera Boana, Bokermannohyla, Ololygon, Scinax, and Dendropsophus described some karyotypic characters such as conventional staining, C-banding and NORs, and FISH with specific probes. Methods: This study describes for the first time the karyotypes of four species: Bokermannohyla ibitipoca, Ololygon luizotavioi, Dendropsophus bipunctatus, and Dendropsophus ruschii. Furthermore, wemap CA(15) and CAT(10) microsatellite sites for the aforementioned species and six more species from the same genera for insight into the chromosomal evolution within the subfamily Hyalinae. Results: B. ibitipoca and O. luizotavioi had 2n = 24 and karyotypic formulas 18m + 4sm + 2st and 8m + 12sm + 4st, while D. bipunctatus and D. ruschii showed 2n = 30 and karyotypic formulas 12m + 12sm+ 4st + 2t and 10m + 10sm + 6st + 4t, respectively. The diploid numbers and karyotypic formulas revealed here follow the previously reported trend for Hylidae, except B. ibitipoca has a particularity of eight metacentric chromosomes, more than what is commonly found in species of this genus. The microsatellites probes CA(15) and CAT(10) had markings accumulated in blocks in the centromeric, pericentromeric, and terminal regions that were more specific for some species, as well as markings scattered along the chromosomes. We present a comprehensive review table of current data on cytogenetics of these genera. Conclusion: Our findings showed that the karyotypes of the hylids studied here majority fit the postulated conserved diploid number (2n = 24) and morphological chromosome patterns, while the mapping of the microsatellites enabled us to detect differences between species that share similar chromosomal morphologies.Department of Animal Biology Laboratory of Molecular Systematics (Beagle) Federal University of ViçosaDepartment of Structural and Functional Biology Laboratory of Fish Biology and Genetics Botucatu Institute of Biosciences Paulista State UniversityDepartment of General Biology Biometrics Laboratory Federal University of ViçosaDepartment of Animal Biology Museum of Zoology João Moojen (MZUFV) Federal University of ViçosaDepartment of Structural and Functional Biology Laboratory of Fish Biology and Genetics Botucatu Institute of Biosciences Paulista State UniversityFederal University of ViçosaUniversidade Estadual Paulista (UNESP)Universidade Federal de Viçosa (UFV)Souza, Késsia LeiteMelo, Silvana [UNESP]Peixoto, Marco AntônioTravenzoli, Natália MartinsFeio, Renato NevesDergam, Jorge Abdala2025-04-29T19:13:18Z2024-02-16info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article317-326http://dx.doi.org/10.1159/000537875Cytogenetic and Genome Research, v. 163, n. 5-6, p. 317-326, 2024.1424-859X1424-8581https://hdl.handle.net/11449/30200310.1159/0005378752-s2.0-85192114524Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengCytogenetic and Genome Researchinfo:eu-repo/semantics/openAccess2025-04-30T14:04:20Zoai:repositorio.unesp.br:11449/302003Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462025-04-30T14:04:20Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Repetitive DNA Mapping in Five Genera of Tree Frogs (Amphibia: Anura) from the Atlantic Forest: New Highlights on Genomic Organization in Hylidae
title Repetitive DNA Mapping in Five Genera of Tree Frogs (Amphibia: Anura) from the Atlantic Forest: New Highlights on Genomic Organization in Hylidae
spellingShingle Repetitive DNA Mapping in Five Genera of Tree Frogs (Amphibia: Anura) from the Atlantic Forest: New Highlights on Genomic Organization in Hylidae
Souza, Késsia Leite
Chromosomal evolution
Fluorescent in situ hybridization
Microsatellite
Repetitive DNA
Tandem repeats
title_short Repetitive DNA Mapping in Five Genera of Tree Frogs (Amphibia: Anura) from the Atlantic Forest: New Highlights on Genomic Organization in Hylidae
title_full Repetitive DNA Mapping in Five Genera of Tree Frogs (Amphibia: Anura) from the Atlantic Forest: New Highlights on Genomic Organization in Hylidae
title_fullStr Repetitive DNA Mapping in Five Genera of Tree Frogs (Amphibia: Anura) from the Atlantic Forest: New Highlights on Genomic Organization in Hylidae
title_full_unstemmed Repetitive DNA Mapping in Five Genera of Tree Frogs (Amphibia: Anura) from the Atlantic Forest: New Highlights on Genomic Organization in Hylidae
title_sort Repetitive DNA Mapping in Five Genera of Tree Frogs (Amphibia: Anura) from the Atlantic Forest: New Highlights on Genomic Organization in Hylidae
author Souza, Késsia Leite
author_facet Souza, Késsia Leite
Melo, Silvana [UNESP]
Peixoto, Marco Antônio
Travenzoli, Natália Martins
Feio, Renato Neves
Dergam, Jorge Abdala
author_role author
author2 Melo, Silvana [UNESP]
Peixoto, Marco Antônio
Travenzoli, Natália Martins
Feio, Renato Neves
Dergam, Jorge Abdala
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Federal University of Viçosa
Universidade Estadual Paulista (UNESP)
Universidade Federal de Viçosa (UFV)
dc.contributor.author.fl_str_mv Souza, Késsia Leite
Melo, Silvana [UNESP]
Peixoto, Marco Antônio
Travenzoli, Natália Martins
Feio, Renato Neves
Dergam, Jorge Abdala
dc.subject.por.fl_str_mv Chromosomal evolution
Fluorescent in situ hybridization
Microsatellite
Repetitive DNA
Tandem repeats
topic Chromosomal evolution
Fluorescent in situ hybridization
Microsatellite
Repetitive DNA
Tandem repeats
description Introduction: The tribes Cophomantini, Scinaxini, and Dendropsophini are anurans that belong to Hylidae, with wide distribution in tropical and subtropical regions around the world. The taxonomy and systematics of this family remain in a state of ongoing revision. Previous cytogenetic analyses of genera Boana, Bokermannohyla, Ololygon, Scinax, and Dendropsophus described some karyotypic characters such as conventional staining, C-banding and NORs, and FISH with specific probes. Methods: This study describes for the first time the karyotypes of four species: Bokermannohyla ibitipoca, Ololygon luizotavioi, Dendropsophus bipunctatus, and Dendropsophus ruschii. Furthermore, wemap CA(15) and CAT(10) microsatellite sites for the aforementioned species and six more species from the same genera for insight into the chromosomal evolution within the subfamily Hyalinae. Results: B. ibitipoca and O. luizotavioi had 2n = 24 and karyotypic formulas 18m + 4sm + 2st and 8m + 12sm + 4st, while D. bipunctatus and D. ruschii showed 2n = 30 and karyotypic formulas 12m + 12sm+ 4st + 2t and 10m + 10sm + 6st + 4t, respectively. The diploid numbers and karyotypic formulas revealed here follow the previously reported trend for Hylidae, except B. ibitipoca has a particularity of eight metacentric chromosomes, more than what is commonly found in species of this genus. The microsatellites probes CA(15) and CAT(10) had markings accumulated in blocks in the centromeric, pericentromeric, and terminal regions that were more specific for some species, as well as markings scattered along the chromosomes. We present a comprehensive review table of current data on cytogenetics of these genera. Conclusion: Our findings showed that the karyotypes of the hylids studied here majority fit the postulated conserved diploid number (2n = 24) and morphological chromosome patterns, while the mapping of the microsatellites enabled us to detect differences between species that share similar chromosomal morphologies.
publishDate 2024
dc.date.none.fl_str_mv 2024-02-16
2025-04-29T19:13:18Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1159/000537875
Cytogenetic and Genome Research, v. 163, n. 5-6, p. 317-326, 2024.
1424-859X
1424-8581
https://hdl.handle.net/11449/302003
10.1159/000537875
2-s2.0-85192114524
url http://dx.doi.org/10.1159/000537875
https://hdl.handle.net/11449/302003
identifier_str_mv Cytogenetic and Genome Research, v. 163, n. 5-6, p. 317-326, 2024.
1424-859X
1424-8581
10.1159/000537875
2-s2.0-85192114524
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Cytogenetic and Genome Research
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 317-326
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
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