Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology

Bibliographic Details
Main Author: Okino, Cintia H.
Publication Date: 2020
Other Authors: Voss-Rech, Daiane, Jaenisch, Fátima R. F., Trevisol, Iara M., Rebelatto, Raquel, Coldebella, Arlei, Mores, Marcos A. Z., Giglioti, Rodrigo [UNESP], Vaz, Clarissa S. L.
Format: Article
Language: eng
Source: Repositório Institucional da UNESP
Download full: http://dx.doi.org/10.1007/s00284-020-01906-7
http://hdl.handle.net/11449/198498
Summary: Infectious bursal disease (IBD) is an immunosuppressive viral disease of chickens, associated with severe economic losses and major threats to poultry production worldwide. Disease prevention programs rely on unequivocal identification of the pathogen, as well as vaccination programs. This study developed a sensitive, one-step, real-time, quantitative reverse transcription polymerase chain reaction (RT-qPCR) assay using a hydrolysis probe system for infectious bursal disease virus (IBDV, VP1 gene) detection and quantification, which was compared to other routinely used diagnostic methods. The assay successfully detected IBD reference viruses and field isolates. The absence of cross-reactivity was detected with negative samples or with other avian viruses in the analytical specificity test. The detection limit of this assay was 70 RNA copies. RT-qPCR was more sensitive in the detection of serially diluted IBDV isolates compared to virus isolation. For clinical samples, the sensitivity and specificity values of RT-qPCR compared to enzyme-linked immunosorbent assay (ELISA) were 97.5% and 100%, respectively, and compared to histopathology, these values were 100% and 93.94%, respectively. RT-qPCR can provide a simple and reliable assay for IBDV surveillance programs and for evaluation of control strategies.
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spelling Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and HistopathologyInfectious bursal disease (IBD) is an immunosuppressive viral disease of chickens, associated with severe economic losses and major threats to poultry production worldwide. Disease prevention programs rely on unequivocal identification of the pathogen, as well as vaccination programs. This study developed a sensitive, one-step, real-time, quantitative reverse transcription polymerase chain reaction (RT-qPCR) assay using a hydrolysis probe system for infectious bursal disease virus (IBDV, VP1 gene) detection and quantification, which was compared to other routinely used diagnostic methods. The assay successfully detected IBD reference viruses and field isolates. The absence of cross-reactivity was detected with negative samples or with other avian viruses in the analytical specificity test. The detection limit of this assay was 70 RNA copies. RT-qPCR was more sensitive in the detection of serially diluted IBDV isolates compared to virus isolation. For clinical samples, the sensitivity and specificity values of RT-qPCR compared to enzyme-linked immunosorbent assay (ELISA) were 97.5% and 100%, respectively, and compared to histopathology, these values were 100% and 93.94%, respectively. RT-qPCR can provide a simple and reliable assay for IBDV surveillance programs and for evaluation of control strategies.Empresa Brasileira de Pesquisa AgropecuáriaEmbrapa Suínos E Aves, BR 153, Km 110Embrapa Pecuária Sudeste, Rodovia Washington Luiz, Km 234, Fazenda CanchimDepartamento de Zootecnia Universidade Estadual Paulista - UNESPDepartamento de Zootecnia Universidade Estadual Paulista - UNESPEmpresa Brasileira de Pesquisa Agropecuária: 0313100900Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Universidade Estadual Paulista (Unesp)Okino, Cintia H.Voss-Rech, DaianeJaenisch, Fátima R. F.Trevisol, Iara M.Rebelatto, RaquelColdebella, ArleiMores, Marcos A. Z.Giglioti, Rodrigo [UNESP]Vaz, Clarissa S. L.2020-12-12T01:14:28Z2020-12-12T01:14:28Z2020-06-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1043-1050http://dx.doi.org/10.1007/s00284-020-01906-7Current Microbiology, v. 77, n. 6, p. 1043-1050, 2020.1432-09910343-8651http://hdl.handle.net/11449/19849810.1007/s00284-020-01906-72-s2.0-85079179716Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengCurrent Microbiologyinfo:eu-repo/semantics/openAccess2021-10-22T13:12:43Zoai:repositorio.unesp.br:11449/198498Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462021-10-22T13:12:43Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology
title Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology
spellingShingle Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology
Okino, Cintia H.
title_short Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology
title_full Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology
title_fullStr Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology
title_full_unstemmed Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology
title_sort Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology
author Okino, Cintia H.
author_facet Okino, Cintia H.
Voss-Rech, Daiane
Jaenisch, Fátima R. F.
Trevisol, Iara M.
Rebelatto, Raquel
Coldebella, Arlei
Mores, Marcos A. Z.
Giglioti, Rodrigo [UNESP]
Vaz, Clarissa S. L.
author_role author
author2 Voss-Rech, Daiane
Jaenisch, Fátima R. F.
Trevisol, Iara M.
Rebelatto, Raquel
Coldebella, Arlei
Mores, Marcos A. Z.
Giglioti, Rodrigo [UNESP]
Vaz, Clarissa S. L.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Okino, Cintia H.
Voss-Rech, Daiane
Jaenisch, Fátima R. F.
Trevisol, Iara M.
Rebelatto, Raquel
Coldebella, Arlei
Mores, Marcos A. Z.
Giglioti, Rodrigo [UNESP]
Vaz, Clarissa S. L.
description Infectious bursal disease (IBD) is an immunosuppressive viral disease of chickens, associated with severe economic losses and major threats to poultry production worldwide. Disease prevention programs rely on unequivocal identification of the pathogen, as well as vaccination programs. This study developed a sensitive, one-step, real-time, quantitative reverse transcription polymerase chain reaction (RT-qPCR) assay using a hydrolysis probe system for infectious bursal disease virus (IBDV, VP1 gene) detection and quantification, which was compared to other routinely used diagnostic methods. The assay successfully detected IBD reference viruses and field isolates. The absence of cross-reactivity was detected with negative samples or with other avian viruses in the analytical specificity test. The detection limit of this assay was 70 RNA copies. RT-qPCR was more sensitive in the detection of serially diluted IBDV isolates compared to virus isolation. For clinical samples, the sensitivity and specificity values of RT-qPCR compared to enzyme-linked immunosorbent assay (ELISA) were 97.5% and 100%, respectively, and compared to histopathology, these values were 100% and 93.94%, respectively. RT-qPCR can provide a simple and reliable assay for IBDV surveillance programs and for evaluation of control strategies.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-12T01:14:28Z
2020-12-12T01:14:28Z
2020-06-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1007/s00284-020-01906-7
Current Microbiology, v. 77, n. 6, p. 1043-1050, 2020.
1432-0991
0343-8651
http://hdl.handle.net/11449/198498
10.1007/s00284-020-01906-7
2-s2.0-85079179716
url http://dx.doi.org/10.1007/s00284-020-01906-7
http://hdl.handle.net/11449/198498
identifier_str_mv Current Microbiology, v. 77, n. 6, p. 1043-1050, 2020.
1432-0991
0343-8651
10.1007/s00284-020-01906-7
2-s2.0-85079179716
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Current Microbiology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 1043-1050
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
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