Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology
Main Author: | |
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Publication Date: | 2020 |
Other Authors: | , , , , , , , |
Format: | Article |
Language: | eng |
Source: | Repositório Institucional da UNESP |
Download full: | http://dx.doi.org/10.1007/s00284-020-01906-7 http://hdl.handle.net/11449/198498 |
Summary: | Infectious bursal disease (IBD) is an immunosuppressive viral disease of chickens, associated with severe economic losses and major threats to poultry production worldwide. Disease prevention programs rely on unequivocal identification of the pathogen, as well as vaccination programs. This study developed a sensitive, one-step, real-time, quantitative reverse transcription polymerase chain reaction (RT-qPCR) assay using a hydrolysis probe system for infectious bursal disease virus (IBDV, VP1 gene) detection and quantification, which was compared to other routinely used diagnostic methods. The assay successfully detected IBD reference viruses and field isolates. The absence of cross-reactivity was detected with negative samples or with other avian viruses in the analytical specificity test. The detection limit of this assay was 70 RNA copies. RT-qPCR was more sensitive in the detection of serially diluted IBDV isolates compared to virus isolation. For clinical samples, the sensitivity and specificity values of RT-qPCR compared to enzyme-linked immunosorbent assay (ELISA) were 97.5% and 100%, respectively, and compared to histopathology, these values were 100% and 93.94%, respectively. RT-qPCR can provide a simple and reliable assay for IBDV surveillance programs and for evaluation of control strategies. |
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Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and HistopathologyInfectious bursal disease (IBD) is an immunosuppressive viral disease of chickens, associated with severe economic losses and major threats to poultry production worldwide. Disease prevention programs rely on unequivocal identification of the pathogen, as well as vaccination programs. This study developed a sensitive, one-step, real-time, quantitative reverse transcription polymerase chain reaction (RT-qPCR) assay using a hydrolysis probe system for infectious bursal disease virus (IBDV, VP1 gene) detection and quantification, which was compared to other routinely used diagnostic methods. The assay successfully detected IBD reference viruses and field isolates. The absence of cross-reactivity was detected with negative samples or with other avian viruses in the analytical specificity test. The detection limit of this assay was 70 RNA copies. RT-qPCR was more sensitive in the detection of serially diluted IBDV isolates compared to virus isolation. For clinical samples, the sensitivity and specificity values of RT-qPCR compared to enzyme-linked immunosorbent assay (ELISA) were 97.5% and 100%, respectively, and compared to histopathology, these values were 100% and 93.94%, respectively. RT-qPCR can provide a simple and reliable assay for IBDV surveillance programs and for evaluation of control strategies.Empresa Brasileira de Pesquisa AgropecuáriaEmbrapa Suínos E Aves, BR 153, Km 110Embrapa Pecuária Sudeste, Rodovia Washington Luiz, Km 234, Fazenda CanchimDepartamento de Zootecnia Universidade Estadual Paulista - UNESPDepartamento de Zootecnia Universidade Estadual Paulista - UNESPEmpresa Brasileira de Pesquisa Agropecuária: 0313100900Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Universidade Estadual Paulista (Unesp)Okino, Cintia H.Voss-Rech, DaianeJaenisch, Fátima R. F.Trevisol, Iara M.Rebelatto, RaquelColdebella, ArleiMores, Marcos A. Z.Giglioti, Rodrigo [UNESP]Vaz, Clarissa S. L.2020-12-12T01:14:28Z2020-12-12T01:14:28Z2020-06-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1043-1050http://dx.doi.org/10.1007/s00284-020-01906-7Current Microbiology, v. 77, n. 6, p. 1043-1050, 2020.1432-09910343-8651http://hdl.handle.net/11449/19849810.1007/s00284-020-01906-72-s2.0-85079179716Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengCurrent Microbiologyinfo:eu-repo/semantics/openAccess2021-10-22T13:12:43Zoai:repositorio.unesp.br:11449/198498Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462021-10-22T13:12:43Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology |
title |
Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology |
spellingShingle |
Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology Okino, Cintia H. |
title_short |
Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology |
title_full |
Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology |
title_fullStr |
Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology |
title_full_unstemmed |
Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology |
title_sort |
Detecting Infectious Bursal Disease Using a VP1 Gene-Based RT-qPCR Assay Compared to Standard Methods of Virus Isolation, ELISA, and Histopathology |
author |
Okino, Cintia H. |
author_facet |
Okino, Cintia H. Voss-Rech, Daiane Jaenisch, Fátima R. F. Trevisol, Iara M. Rebelatto, Raquel Coldebella, Arlei Mores, Marcos A. Z. Giglioti, Rodrigo [UNESP] Vaz, Clarissa S. L. |
author_role |
author |
author2 |
Voss-Rech, Daiane Jaenisch, Fátima R. F. Trevisol, Iara M. Rebelatto, Raquel Coldebella, Arlei Mores, Marcos A. Z. Giglioti, Rodrigo [UNESP] Vaz, Clarissa S. L. |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA) Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Okino, Cintia H. Voss-Rech, Daiane Jaenisch, Fátima R. F. Trevisol, Iara M. Rebelatto, Raquel Coldebella, Arlei Mores, Marcos A. Z. Giglioti, Rodrigo [UNESP] Vaz, Clarissa S. L. |
description |
Infectious bursal disease (IBD) is an immunosuppressive viral disease of chickens, associated with severe economic losses and major threats to poultry production worldwide. Disease prevention programs rely on unequivocal identification of the pathogen, as well as vaccination programs. This study developed a sensitive, one-step, real-time, quantitative reverse transcription polymerase chain reaction (RT-qPCR) assay using a hydrolysis probe system for infectious bursal disease virus (IBDV, VP1 gene) detection and quantification, which was compared to other routinely used diagnostic methods. The assay successfully detected IBD reference viruses and field isolates. The absence of cross-reactivity was detected with negative samples or with other avian viruses in the analytical specificity test. The detection limit of this assay was 70 RNA copies. RT-qPCR was more sensitive in the detection of serially diluted IBDV isolates compared to virus isolation. For clinical samples, the sensitivity and specificity values of RT-qPCR compared to enzyme-linked immunosorbent assay (ELISA) were 97.5% and 100%, respectively, and compared to histopathology, these values were 100% and 93.94%, respectively. RT-qPCR can provide a simple and reliable assay for IBDV surveillance programs and for evaluation of control strategies. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-12-12T01:14:28Z 2020-12-12T01:14:28Z 2020-06-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1007/s00284-020-01906-7 Current Microbiology, v. 77, n. 6, p. 1043-1050, 2020. 1432-0991 0343-8651 http://hdl.handle.net/11449/198498 10.1007/s00284-020-01906-7 2-s2.0-85079179716 |
url |
http://dx.doi.org/10.1007/s00284-020-01906-7 http://hdl.handle.net/11449/198498 |
identifier_str_mv |
Current Microbiology, v. 77, n. 6, p. 1043-1050, 2020. 1432-0991 0343-8651 10.1007/s00284-020-01906-7 2-s2.0-85079179716 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Current Microbiology |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
1043-1050 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
repositoriounesp@unesp.br |
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1834483595085873152 |