Transcriptome-based phylogenomic analysis reveals evidence of ancient hybridization events in the Mepraia genus (Hemiptera: Reduviidae: Triatominae)
| Main Author: | |
|---|---|
| Publication Date: | 2023 |
| Other Authors: | , , , , , , , |
| Format: | Article |
| Language: | eng |
| Source: | Repositório Institucional da UNESP |
| Download full: | http://dx.doi.org/10.3389/fevo.2023.1215319 https://hdl.handle.net/11449/301378 |
Summary: | Introduction: The Mepraia genus is composed of three endemic species in Chile, namely Mepraia spinolai, Mepraia gajardoi, and Mepraia parapatrica, all capable of transmitting the causative agent of Chagas disease. Although species divergence within this genus is supported by morphological, molecular, and geological evidence, it has never been validated by genome-wide data. Methods: In this sense, a pioneering phylogenomic study was conducted using transcriptome data of the three species, aiming to infer robust phylogenies and evaluate the impact of interspecific gene flow on the evolution of these insects. Our transcriptomes were used to robustly infer the phylogenetic relationships, employing multi-species coalescent and supermatrix approaches, as well as to investigate the occurrence of introgression. Results and discussion: The inferred phylogenies support the monophyly of the three described taxa and infer divergence times, although gene trees display high levels of discordance. Our results indicate widespread introgression among Mepraia lineages. Thus, our results support that Mepraia diversification occurred in a short period resulting in reticulate phylogenies and low genetic diversity. Additionally, we obtained evidence of introgression suggesting that ancient hybridization has had a major role in the evolution of the three Mepraia species. |
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Transcriptome-based phylogenomic analysis reveals evidence of ancient hybridization events in the Mepraia genus (Hemiptera: Reduviidae: Triatominae)ILSinterspecific gene flowintrogressionmulti-species coalescent approachreticulate phylogeniesIntroduction: The Mepraia genus is composed of three endemic species in Chile, namely Mepraia spinolai, Mepraia gajardoi, and Mepraia parapatrica, all capable of transmitting the causative agent of Chagas disease. Although species divergence within this genus is supported by morphological, molecular, and geological evidence, it has never been validated by genome-wide data. Methods: In this sense, a pioneering phylogenomic study was conducted using transcriptome data of the three species, aiming to infer robust phylogenies and evaluate the impact of interspecific gene flow on the evolution of these insects. Our transcriptomes were used to robustly infer the phylogenetic relationships, employing multi-species coalescent and supermatrix approaches, as well as to investigate the occurrence of introgression. Results and discussion: The inferred phylogenies support the monophyly of the three described taxa and infer divergence times, although gene trees display high levels of discordance. Our results indicate widespread introgression among Mepraia lineages. Thus, our results support that Mepraia diversification occurred in a short period resulting in reticulate phylogenies and low genetic diversity. Additionally, we obtained evidence of introgression suggesting that ancient hybridization has had a major role in the evolution of the three Mepraia species.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Institute of Biology Campinas State University (Unicamp), SPDepartment of Plant and Environmental Protection Services University of Hawaii at ManoaSchool of Pharmaceutical Sciences São Paulo State University (Unesp), SPDepartment of Genetics and Evolution Federal University of São Carlos (UFSCar), SPLaboratory of Entomology in Public Health Department of Epidemiology Faculty of Public Health University of São Paulo, SPInstituto de Entomologia Univ. Metropolitana de Ciencias de la EducaciónPost-Graduation Program in Health and Environment Tiradentes University (UNIT), SESchool of Pharmaceutical Sciences São Paulo State University (Unesp), SPFAPESP: 17/06460-4CAPES: Financing Code 001.Universidade Estadual de Campinas (UNICAMP)University of Hawaii at ManoaUniversidade Estadual Paulista (UNESP)Universidade Federal de São Carlos (UFSCar)Universidade de São Paulo (USP)Univ. Metropolitana de Ciencias de la EducaciónTiradentes University (UNIT)Belintani, TiagoCongrains, Carlos [UNESP]Pinotti, HeloisaChahad-Ehlers, Samirade Brito, Reinaldo A.Oliveira, JaderFrías Lasserre, DanielFontes, Felipe MendesDa Rosa, João Aristeu2025-04-29T18:58:02Z2023-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.3389/fevo.2023.1215319Frontiers in Ecology and Evolution, v. 11.2296-701Xhttps://hdl.handle.net/11449/30137810.3389/fevo.2023.12153192-s2.0-85165883146Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengFrontiers in Ecology and Evolutioninfo:eu-repo/semantics/openAccess2025-05-01T05:22:30Zoai:repositorio.unesp.br:11449/301378Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462025-05-01T05:22:30Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
| dc.title.none.fl_str_mv |
Transcriptome-based phylogenomic analysis reveals evidence of ancient hybridization events in the Mepraia genus (Hemiptera: Reduviidae: Triatominae) |
| title |
Transcriptome-based phylogenomic analysis reveals evidence of ancient hybridization events in the Mepraia genus (Hemiptera: Reduviidae: Triatominae) |
| spellingShingle |
Transcriptome-based phylogenomic analysis reveals evidence of ancient hybridization events in the Mepraia genus (Hemiptera: Reduviidae: Triatominae) Belintani, Tiago ILS interspecific gene flow introgression multi-species coalescent approach reticulate phylogenies |
| title_short |
Transcriptome-based phylogenomic analysis reveals evidence of ancient hybridization events in the Mepraia genus (Hemiptera: Reduviidae: Triatominae) |
| title_full |
Transcriptome-based phylogenomic analysis reveals evidence of ancient hybridization events in the Mepraia genus (Hemiptera: Reduviidae: Triatominae) |
| title_fullStr |
Transcriptome-based phylogenomic analysis reveals evidence of ancient hybridization events in the Mepraia genus (Hemiptera: Reduviidae: Triatominae) |
| title_full_unstemmed |
Transcriptome-based phylogenomic analysis reveals evidence of ancient hybridization events in the Mepraia genus (Hemiptera: Reduviidae: Triatominae) |
| title_sort |
Transcriptome-based phylogenomic analysis reveals evidence of ancient hybridization events in the Mepraia genus (Hemiptera: Reduviidae: Triatominae) |
| author |
Belintani, Tiago |
| author_facet |
Belintani, Tiago Congrains, Carlos [UNESP] Pinotti, Heloisa Chahad-Ehlers, Samira de Brito, Reinaldo A. Oliveira, Jader Frías Lasserre, Daniel Fontes, Felipe Mendes Da Rosa, João Aristeu |
| author_role |
author |
| author2 |
Congrains, Carlos [UNESP] Pinotti, Heloisa Chahad-Ehlers, Samira de Brito, Reinaldo A. Oliveira, Jader Frías Lasserre, Daniel Fontes, Felipe Mendes Da Rosa, João Aristeu |
| author2_role |
author author author author author author author author |
| dc.contributor.none.fl_str_mv |
Universidade Estadual de Campinas (UNICAMP) University of Hawaii at Manoa Universidade Estadual Paulista (UNESP) Universidade Federal de São Carlos (UFSCar) Universidade de São Paulo (USP) Univ. Metropolitana de Ciencias de la Educación Tiradentes University (UNIT) |
| dc.contributor.author.fl_str_mv |
Belintani, Tiago Congrains, Carlos [UNESP] Pinotti, Heloisa Chahad-Ehlers, Samira de Brito, Reinaldo A. Oliveira, Jader Frías Lasserre, Daniel Fontes, Felipe Mendes Da Rosa, João Aristeu |
| dc.subject.por.fl_str_mv |
ILS interspecific gene flow introgression multi-species coalescent approach reticulate phylogenies |
| topic |
ILS interspecific gene flow introgression multi-species coalescent approach reticulate phylogenies |
| description |
Introduction: The Mepraia genus is composed of three endemic species in Chile, namely Mepraia spinolai, Mepraia gajardoi, and Mepraia parapatrica, all capable of transmitting the causative agent of Chagas disease. Although species divergence within this genus is supported by morphological, molecular, and geological evidence, it has never been validated by genome-wide data. Methods: In this sense, a pioneering phylogenomic study was conducted using transcriptome data of the three species, aiming to infer robust phylogenies and evaluate the impact of interspecific gene flow on the evolution of these insects. Our transcriptomes were used to robustly infer the phylogenetic relationships, employing multi-species coalescent and supermatrix approaches, as well as to investigate the occurrence of introgression. Results and discussion: The inferred phylogenies support the monophyly of the three described taxa and infer divergence times, although gene trees display high levels of discordance. Our results indicate widespread introgression among Mepraia lineages. Thus, our results support that Mepraia diversification occurred in a short period resulting in reticulate phylogenies and low genetic diversity. Additionally, we obtained evidence of introgression suggesting that ancient hybridization has had a major role in the evolution of the three Mepraia species. |
| publishDate |
2023 |
| dc.date.none.fl_str_mv |
2023-01-01 2025-04-29T18:58:02Z |
| dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
| format |
article |
| status_str |
publishedVersion |
| dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.3389/fevo.2023.1215319 Frontiers in Ecology and Evolution, v. 11. 2296-701X https://hdl.handle.net/11449/301378 10.3389/fevo.2023.1215319 2-s2.0-85165883146 |
| url |
http://dx.doi.org/10.3389/fevo.2023.1215319 https://hdl.handle.net/11449/301378 |
| identifier_str_mv |
Frontiers in Ecology and Evolution, v. 11. 2296-701X 10.3389/fevo.2023.1215319 2-s2.0-85165883146 |
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eng |
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eng |
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Frontiers in Ecology and Evolution |
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openAccess |
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Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
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