A genomic glimpse of B chromosomes in cichlids

Detalhes bibliográficos
Autor(a) principal: Martins, Cesar [UNESP]
Data de Publicação: 2021
Outros Autores: Jehangir, Maryam [UNESP]
Tipo de documento: Outros
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1007/s13258-021-01049-4
http://hdl.handle.net/11449/208385
Resumo: Background: B chromosomes (Bs) are extra karyotype elements in addition to A chromosomes and are found in all major eukaryotic taxa. Among hundreds of investigated species, cichlid fishes have emerged as an interesting group of model and have contributed to unravel the complex biology of B chromosome. Objective: We review the current state of knowledge on B chromosome investigation in cichlid fish and discuss the recent genomic advances over gene and sequences hunting on Bs and their impact on the current concept of B chromosomes. Results: The Bs of cichlids have been under the subject of classical cytogenetics and high scale DNA, RNA and epigenetics analysis and a list of B chromosome genes and functional sequences has been generated. B chromosomes of cichlids are restricted to females in some species and are enriched with genes, relics of genes, transposable elements and sequences transcribing for many significant biological functions. Diverse potentially functional sequences have been described in the B chromosome of cichlids and could influence important biological characteristics as well seems to affect transcription and epigenetic modifications of the whole genome. Conclusion: One of the most enigmatic characteristics of Bs in cichlids is their genic content related to cell cycle and chromosome structure, and their influence over sex rates. The relationship of Bs with cell cycle and sex determination looks like to be connected with the drive of the Bs during cell divisions.
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spelling A genomic glimpse of B chromosomes in cichlidsEvolutionGenesGenomeSupernumerary chromosomesBackground: B chromosomes (Bs) are extra karyotype elements in addition to A chromosomes and are found in all major eukaryotic taxa. Among hundreds of investigated species, cichlid fishes have emerged as an interesting group of model and have contributed to unravel the complex biology of B chromosome. Objective: We review the current state of knowledge on B chromosome investigation in cichlid fish and discuss the recent genomic advances over gene and sequences hunting on Bs and their impact on the current concept of B chromosomes. Results: The Bs of cichlids have been under the subject of classical cytogenetics and high scale DNA, RNA and epigenetics analysis and a list of B chromosome genes and functional sequences has been generated. B chromosomes of cichlids are restricted to females in some species and are enriched with genes, relics of genes, transposable elements and sequences transcribing for many significant biological functions. Diverse potentially functional sequences have been described in the B chromosome of cichlids and could influence important biological characteristics as well seems to affect transcription and epigenetic modifications of the whole genome. Conclusion: One of the most enigmatic characteristics of Bs in cichlids is their genic content related to cell cycle and chromosome structure, and their influence over sex rates. The relationship of Bs with cell cycle and sex determination looks like to be connected with the drive of the Bs during cell divisions.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Department of Structural and Functional Biology Institute of Biosciences at Botucatu São Paulo State University (UNESP)Department of Structural and Functional Biology Institute of Biosciences at Botucatu São Paulo State University (UNESP)FAPESP: 2015/16661-1CNPq: 304111/2020-1Universidade Estadual Paulista (Unesp)Martins, Cesar [UNESP]Jehangir, Maryam [UNESP]2021-06-25T11:11:14Z2021-06-25T11:11:14Z2021-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/other199-208http://dx.doi.org/10.1007/s13258-021-01049-4Genes and Genomics, v. 43, n. 3, p. 199-208, 2021.2092-92931976-9571http://hdl.handle.net/11449/20838510.1007/s13258-021-01049-42-s2.0-8510054047288588006994253520000-0003-3534-974XScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenes and Genomicsinfo:eu-repo/semantics/openAccess2024-10-14T19:21:04Zoai:repositorio.unesp.br:11449/208385Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462025-03-28T14:55:45.770023Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv A genomic glimpse of B chromosomes in cichlids
title A genomic glimpse of B chromosomes in cichlids
spellingShingle A genomic glimpse of B chromosomes in cichlids
Martins, Cesar [UNESP]
Evolution
Genes
Genome
Supernumerary chromosomes
title_short A genomic glimpse of B chromosomes in cichlids
title_full A genomic glimpse of B chromosomes in cichlids
title_fullStr A genomic glimpse of B chromosomes in cichlids
title_full_unstemmed A genomic glimpse of B chromosomes in cichlids
title_sort A genomic glimpse of B chromosomes in cichlids
author Martins, Cesar [UNESP]
author_facet Martins, Cesar [UNESP]
Jehangir, Maryam [UNESP]
author_role author
author2 Jehangir, Maryam [UNESP]
author2_role author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Martins, Cesar [UNESP]
Jehangir, Maryam [UNESP]
dc.subject.por.fl_str_mv Evolution
Genes
Genome
Supernumerary chromosomes
topic Evolution
Genes
Genome
Supernumerary chromosomes
description Background: B chromosomes (Bs) are extra karyotype elements in addition to A chromosomes and are found in all major eukaryotic taxa. Among hundreds of investigated species, cichlid fishes have emerged as an interesting group of model and have contributed to unravel the complex biology of B chromosome. Objective: We review the current state of knowledge on B chromosome investigation in cichlid fish and discuss the recent genomic advances over gene and sequences hunting on Bs and their impact on the current concept of B chromosomes. Results: The Bs of cichlids have been under the subject of classical cytogenetics and high scale DNA, RNA and epigenetics analysis and a list of B chromosome genes and functional sequences has been generated. B chromosomes of cichlids are restricted to females in some species and are enriched with genes, relics of genes, transposable elements and sequences transcribing for many significant biological functions. Diverse potentially functional sequences have been described in the B chromosome of cichlids and could influence important biological characteristics as well seems to affect transcription and epigenetic modifications of the whole genome. Conclusion: One of the most enigmatic characteristics of Bs in cichlids is their genic content related to cell cycle and chromosome structure, and their influence over sex rates. The relationship of Bs with cell cycle and sex determination looks like to be connected with the drive of the Bs during cell divisions.
publishDate 2021
dc.date.none.fl_str_mv 2021-06-25T11:11:14Z
2021-06-25T11:11:14Z
2021-03-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/other
format other
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1007/s13258-021-01049-4
Genes and Genomics, v. 43, n. 3, p. 199-208, 2021.
2092-9293
1976-9571
http://hdl.handle.net/11449/208385
10.1007/s13258-021-01049-4
2-s2.0-85100540472
8858800699425352
0000-0003-3534-974X
url http://dx.doi.org/10.1007/s13258-021-01049-4
http://hdl.handle.net/11449/208385
identifier_str_mv Genes and Genomics, v. 43, n. 3, p. 199-208, 2021.
2092-9293
1976-9571
10.1007/s13258-021-01049-4
2-s2.0-85100540472
8858800699425352
0000-0003-3534-974X
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Genes and Genomics
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 199-208
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
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