EPIGUI: Graphical User Interface for Simulating Epidemics on Networks
Main Author: | |
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Publication Date: | 2023 |
Other Authors: | , , |
Format: | Article |
Language: | eng |
Source: | Repositório Institucional da UNESP |
Download full: | http://dx.doi.org/10.5540/tcam.2022.024.01.00091 http://hdl.handle.net/11449/244895 |
Summary: | This paper presents a graphical interface called EPIGUI, which allows the study of the dynamics of an infectious disease spread using compartmental models in combination with complex networks. This interface aims at considering stochastic factors that govern the evolution of an infection in a network. Moreover, it provides simple tools to create networks of agents and to define the epidemiological parameters of outbreaks. There are six common infectious disease models (SI, SIS, SIR, SIRS, SEIR, and SEIRS) or a user can provide another model, combining compartments. Moreover, in the simulations the user can either include a synthetic network generated according to a network model (random, small-world, scalefree, modular, or hierarchical) or a real network. This approach can help understand the paths followed by outbreaks in a given community and design new strategies to prevent and to control them. |
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EPIGUI: Graphical User Interface for Simulating Epidemics on Networksagent-based modelcomplex networksinfectious diseasescomputational graphical interfaceThis paper presents a graphical interface called EPIGUI, which allows the study of the dynamics of an infectious disease spread using compartmental models in combination with complex networks. This interface aims at considering stochastic factors that govern the evolution of an infection in a network. Moreover, it provides simple tools to create networks of agents and to define the epidemiological parameters of outbreaks. There are six common infectious disease models (SI, SIS, SIR, SIRS, SEIR, and SEIRS) or a user can provide another model, combining compartments. Moreover, in the simulations the user can either include a synthetic network generated according to a network model (random, small-world, scalefree, modular, or hierarchical) or a real network. This approach can help understand the paths followed by outbreaks in a given community and design new strategies to prevent and to control them.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)São Paulo State University, Institute of BiosciencesMaynooth University, Centre for Ocean Energy Research and Department of Electronic EngineeringAGH University of Science and Technology, Faculty of Computer Science, Electronics and TelecommunicationsSão Paulo State University, Institute of BiosciencesCAPES: 1770124FAPESP: 2018/25358-9Sociedade Brasileira de Matemática Aplicada e Computacional - SBMACUniversidade Estadual Paulista (UNESP)Maynooth UniversityAGH University of Science and TechnologyPinto, E. R. [UNESP]Nepomuceno, E. G.Kusak, J.Campanharo, A. S. L. O. [UNESP]2023-07-29T11:14:59Z2023-07-29T11:14:59Z2023-03-27info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article91-120application/pdfhttp://dx.doi.org/10.5540/tcam.2022.024.01.00091Trends in Computational and Applied Mathematics. Sociedade Brasileira de Matemática Aplicada e Computacional - SBMAC, v. 24, n. 1, p. 91-120, 2023.2676-0029http://hdl.handle.net/11449/24489510.5540/tcam.2022.024.01.00091S2676-00292023000100091S2676-00292023000100091.pdfSciELOreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengTrends in Computational and Applied Mathematicsinfo:eu-repo/semantics/openAccess2024-01-19T06:30:42Zoai:repositorio.unesp.br:11449/244895Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-01-19T06:30:42Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
EPIGUI: Graphical User Interface for Simulating Epidemics on Networks |
title |
EPIGUI: Graphical User Interface for Simulating Epidemics on Networks |
spellingShingle |
EPIGUI: Graphical User Interface for Simulating Epidemics on Networks Pinto, E. R. [UNESP] agent-based model complex networks infectious diseases computational graphical interface |
title_short |
EPIGUI: Graphical User Interface for Simulating Epidemics on Networks |
title_full |
EPIGUI: Graphical User Interface for Simulating Epidemics on Networks |
title_fullStr |
EPIGUI: Graphical User Interface for Simulating Epidemics on Networks |
title_full_unstemmed |
EPIGUI: Graphical User Interface for Simulating Epidemics on Networks |
title_sort |
EPIGUI: Graphical User Interface for Simulating Epidemics on Networks |
author |
Pinto, E. R. [UNESP] |
author_facet |
Pinto, E. R. [UNESP] Nepomuceno, E. G. Kusak, J. Campanharo, A. S. L. O. [UNESP] |
author_role |
author |
author2 |
Nepomuceno, E. G. Kusak, J. Campanharo, A. S. L. O. [UNESP] |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (UNESP) Maynooth University AGH University of Science and Technology |
dc.contributor.author.fl_str_mv |
Pinto, E. R. [UNESP] Nepomuceno, E. G. Kusak, J. Campanharo, A. S. L. O. [UNESP] |
dc.subject.por.fl_str_mv |
agent-based model complex networks infectious diseases computational graphical interface |
topic |
agent-based model complex networks infectious diseases computational graphical interface |
description |
This paper presents a graphical interface called EPIGUI, which allows the study of the dynamics of an infectious disease spread using compartmental models in combination with complex networks. This interface aims at considering stochastic factors that govern the evolution of an infection in a network. Moreover, it provides simple tools to create networks of agents and to define the epidemiological parameters of outbreaks. There are six common infectious disease models (SI, SIS, SIR, SIRS, SEIR, and SEIRS) or a user can provide another model, combining compartments. Moreover, in the simulations the user can either include a synthetic network generated according to a network model (random, small-world, scalefree, modular, or hierarchical) or a real network. This approach can help understand the paths followed by outbreaks in a given community and design new strategies to prevent and to control them. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-07-29T11:14:59Z 2023-07-29T11:14:59Z 2023-03-27 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.5540/tcam.2022.024.01.00091 Trends in Computational and Applied Mathematics. Sociedade Brasileira de Matemática Aplicada e Computacional - SBMAC, v. 24, n. 1, p. 91-120, 2023. 2676-0029 http://hdl.handle.net/11449/244895 10.5540/tcam.2022.024.01.00091 S2676-00292023000100091 S2676-00292023000100091.pdf |
url |
http://dx.doi.org/10.5540/tcam.2022.024.01.00091 http://hdl.handle.net/11449/244895 |
identifier_str_mv |
Trends in Computational and Applied Mathematics. Sociedade Brasileira de Matemática Aplicada e Computacional - SBMAC, v. 24, n. 1, p. 91-120, 2023. 2676-0029 10.5540/tcam.2022.024.01.00091 S2676-00292023000100091 S2676-00292023000100091.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Trends in Computational and Applied Mathematics |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
91-120 application/pdf |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Matemática Aplicada e Computacional - SBMAC |
publisher.none.fl_str_mv |
Sociedade Brasileira de Matemática Aplicada e Computacional - SBMAC |
dc.source.none.fl_str_mv |
SciELO reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
repositoriounesp@unesp.br |
_version_ |
1834484772373528576 |