Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR

Detalhes bibliográficos
Autor(a) principal: Damasceno, J�nio S.
Data de Publicação: 2016
Outros Autores: Siccha-Ramirez, Raquel [UNESP], Oliveira, Claudio [UNESP], Mendon�a, Fernando F., Lima, Arthur C., Machado, Leonardo F. [UNESP], Tosta, Vander C., Farro, Ana Paula C., Hostim-Silva, Maur�cio
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/1982-0224-20150128
http://hdl.handle.net/11449/173537
Resumo: The Atlantic goliath grouper, Epinephelus itajara, is a critically endangered species, threatened by illegal fishing and the destruction of its habitats. A number of other closely related grouper species found in the western Atlantic are also fished intensively. While some countries apply rigorous legislation, illegal harvesting followed by the falsification of fish products, which impedes the correct identification of the species, is a common practice, allowing the catch to be marketed as a different grouper species. In this case, molecular techniques represent an important tool for the monitoring and regulation of fishery practices, and are essential for the forensic identification of a number of different species. In the present study, species-specific primers were developed for the Cytochrome Oxidase subunit I gene, which were applied in a multiplex PCR for the simultaneous identification of nine different species of Epinephelidae: Epinephelus itajara, E. quinquefasciatus, E. morio, Hyporthodus flavolimbatus, H. niveatus, Mycteroperca acutirostris, M. bonaci, M. marginata, and M. microlepis. Multiplex PCR is a rapid, reliable and cost-effective procedure for the identification of commercially-valuable endangered fish species, and may represent a valuable tool for the regulation and sustainable management of fishery resources.
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spelling Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCRCOIConservation geneticsEndangered speciesFishery managementForensic geneticsThe Atlantic goliath grouper, Epinephelus itajara, is a critically endangered species, threatened by illegal fishing and the destruction of its habitats. A number of other closely related grouper species found in the western Atlantic are also fished intensively. While some countries apply rigorous legislation, illegal harvesting followed by the falsification of fish products, which impedes the correct identification of the species, is a common practice, allowing the catch to be marketed as a different grouper species. In this case, molecular techniques represent an important tool for the monitoring and regulation of fishery practices, and are essential for the forensic identification of a number of different species. In the present study, species-specific primers were developed for the Cytochrome Oxidase subunit I gene, which were applied in a multiplex PCR for the simultaneous identification of nine different species of Epinephelidae: Epinephelus itajara, E. quinquefasciatus, E. morio, Hyporthodus flavolimbatus, H. niveatus, Mycteroperca acutirostris, M. bonaci, M. marginata, and M. microlepis. Multiplex PCR is a rapid, reliable and cost-effective procedure for the identification of commercially-valuable endangered fish species, and may represent a valuable tool for the regulation and sustainable management of fishery resources.Departamento de Oceanografia e Ecologia Base Oceanogr�fica Universidade Federal do Esp�rito Santo (UFES), Rodovia ES 10 km 16, 565, CoqueiralLaborat�rio de Gen�tica da Conserva��o PUCMINAS-Pontif�cia Universidade Cat�lica de Minas Gerais, Av. Dom Jos� Gaspar 500, Cora��o Eucar�sticoLaborat�rio de Biologia e Gen�tica de Peixes Departamento de Morfologia Instituto de Bioci�ncias de Botucatu Universidade Estadual Paulista (UNESP), Distrito de Rubi�o Junior, s/nLaboratorio Costero de Tumbes Instituto del Mar del Per� (IMARPE), Calle Jos� Olaya S/N, Nueva EsperanzaDepartamento de Ci�ncias do Mar Instituto do Mar Universidade Federal de S�o Paulo (UNIFESP), Av. Alm. Saldanha da Gama, 89, Ponta da PraiaCosta Lima Aquicultura e Pesca, Pra�a Prefeito Jos� Luiz da Costa, 27, CentroDepartamento de Ci�ncias Agr�rias e Biol�gicas Universidade Federal do Esp�rito Santo (UFES), Rodovia BR 101 Norte, Km 60, Litor�neoLaborat�rio de Biologia e Gen�tica de Peixes Departamento de Morfologia Instituto de Bioci�ncias de Botucatu Universidade Estadual Paulista (UNESP), Distrito de Rubi�o Junior, s/nUniversidade Federal do Esp�rito Santo (UFES)PUCMINAS-Pontif�cia Universidade Cat�lica de Minas GeraisUniversidade Estadual Paulista (Unesp)Instituto del Mar del Per� (IMARPE)Universidade Federal de São Paulo (UNIFESP)Costa Lima Aquicultura e PescaDamasceno, J�nio S.Siccha-Ramirez, Raquel [UNESP]Oliveira, Claudio [UNESP]Mendon�a, Fernando F.Lima, Arthur C.Machado, Leonardo F. [UNESP]Tosta, Vander C.Farro, Ana Paula C.Hostim-Silva, Maur�cio2018-12-11T17:06:09Z2018-12-11T17:06:09Z2016-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://dx.doi.org/10.1590/1982-0224-20150128Neotropical Ichthyology, v. 14, n. 3, 2016.1982-02241679-6225http://hdl.handle.net/11449/17353710.1590/1982-0224-20150128S1679-622520160003002032-s2.0-84988934625S1679-62252016000300203.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengNeotropical Ichthyology0,559info:eu-repo/semantics/openAccess2024-10-14T19:14:43Zoai:repositorio.unesp.br:11449/173537Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-10-14T19:14:43Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR
title Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR
spellingShingle Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR
Damasceno, J�nio S.
COI
Conservation genetics
Endangered species
Fishery management
Forensic genetics
title_short Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR
title_full Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR
title_fullStr Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR
title_full_unstemmed Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR
title_sort Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR
author Damasceno, J�nio S.
author_facet Damasceno, J�nio S.
Siccha-Ramirez, Raquel [UNESP]
Oliveira, Claudio [UNESP]
Mendon�a, Fernando F.
Lima, Arthur C.
Machado, Leonardo F. [UNESP]
Tosta, Vander C.
Farro, Ana Paula C.
Hostim-Silva, Maur�cio
author_role author
author2 Siccha-Ramirez, Raquel [UNESP]
Oliveira, Claudio [UNESP]
Mendon�a, Fernando F.
Lima, Arthur C.
Machado, Leonardo F. [UNESP]
Tosta, Vander C.
Farro, Ana Paula C.
Hostim-Silva, Maur�cio
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal do Esp�rito Santo (UFES)
PUCMINAS-Pontif�cia Universidade Cat�lica de Minas Gerais
Universidade Estadual Paulista (Unesp)
Instituto del Mar del Per� (IMARPE)
Universidade Federal de São Paulo (UNIFESP)
Costa Lima Aquicultura e Pesca
dc.contributor.author.fl_str_mv Damasceno, J�nio S.
Siccha-Ramirez, Raquel [UNESP]
Oliveira, Claudio [UNESP]
Mendon�a, Fernando F.
Lima, Arthur C.
Machado, Leonardo F. [UNESP]
Tosta, Vander C.
Farro, Ana Paula C.
Hostim-Silva, Maur�cio
dc.subject.por.fl_str_mv COI
Conservation genetics
Endangered species
Fishery management
Forensic genetics
topic COI
Conservation genetics
Endangered species
Fishery management
Forensic genetics
description The Atlantic goliath grouper, Epinephelus itajara, is a critically endangered species, threatened by illegal fishing and the destruction of its habitats. A number of other closely related grouper species found in the western Atlantic are also fished intensively. While some countries apply rigorous legislation, illegal harvesting followed by the falsification of fish products, which impedes the correct identification of the species, is a common practice, allowing the catch to be marketed as a different grouper species. In this case, molecular techniques represent an important tool for the monitoring and regulation of fishery practices, and are essential for the forensic identification of a number of different species. In the present study, species-specific primers were developed for the Cytochrome Oxidase subunit I gene, which were applied in a multiplex PCR for the simultaneous identification of nine different species of Epinephelidae: Epinephelus itajara, E. quinquefasciatus, E. morio, Hyporthodus flavolimbatus, H. niveatus, Mycteroperca acutirostris, M. bonaci, M. marginata, and M. microlepis. Multiplex PCR is a rapid, reliable and cost-effective procedure for the identification of commercially-valuable endangered fish species, and may represent a valuable tool for the regulation and sustainable management of fishery resources.
publishDate 2016
dc.date.none.fl_str_mv 2016-01-01
2018-12-11T17:06:09Z
2018-12-11T17:06:09Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/1982-0224-20150128
Neotropical Ichthyology, v. 14, n. 3, 2016.
1982-0224
1679-6225
http://hdl.handle.net/11449/173537
10.1590/1982-0224-20150128
S1679-62252016000300203
2-s2.0-84988934625
S1679-62252016000300203.pdf
url http://dx.doi.org/10.1590/1982-0224-20150128
http://hdl.handle.net/11449/173537
identifier_str_mv Neotropical Ichthyology, v. 14, n. 3, 2016.
1982-0224
1679-6225
10.1590/1982-0224-20150128
S1679-62252016000300203
2-s2.0-84988934625
S1679-62252016000300203.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Neotropical Ichthyology
0,559
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
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instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
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