Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1590/1982-0224-20150128 http://hdl.handle.net/11449/173537 |
Resumo: | The Atlantic goliath grouper, Epinephelus itajara, is a critically endangered species, threatened by illegal fishing and the destruction of its habitats. A number of other closely related grouper species found in the western Atlantic are also fished intensively. While some countries apply rigorous legislation, illegal harvesting followed by the falsification of fish products, which impedes the correct identification of the species, is a common practice, allowing the catch to be marketed as a different grouper species. In this case, molecular techniques represent an important tool for the monitoring and regulation of fishery practices, and are essential for the forensic identification of a number of different species. In the present study, species-specific primers were developed for the Cytochrome Oxidase subunit I gene, which were applied in a multiplex PCR for the simultaneous identification of nine different species of Epinephelidae: Epinephelus itajara, E. quinquefasciatus, E. morio, Hyporthodus flavolimbatus, H. niveatus, Mycteroperca acutirostris, M. bonaci, M. marginata, and M. microlepis. Multiplex PCR is a rapid, reliable and cost-effective procedure for the identification of commercially-valuable endangered fish species, and may represent a valuable tool for the regulation and sustainable management of fishery resources. |
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Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCRCOIConservation geneticsEndangered speciesFishery managementForensic geneticsThe Atlantic goliath grouper, Epinephelus itajara, is a critically endangered species, threatened by illegal fishing and the destruction of its habitats. A number of other closely related grouper species found in the western Atlantic are also fished intensively. While some countries apply rigorous legislation, illegal harvesting followed by the falsification of fish products, which impedes the correct identification of the species, is a common practice, allowing the catch to be marketed as a different grouper species. In this case, molecular techniques represent an important tool for the monitoring and regulation of fishery practices, and are essential for the forensic identification of a number of different species. In the present study, species-specific primers were developed for the Cytochrome Oxidase subunit I gene, which were applied in a multiplex PCR for the simultaneous identification of nine different species of Epinephelidae: Epinephelus itajara, E. quinquefasciatus, E. morio, Hyporthodus flavolimbatus, H. niveatus, Mycteroperca acutirostris, M. bonaci, M. marginata, and M. microlepis. Multiplex PCR is a rapid, reliable and cost-effective procedure for the identification of commercially-valuable endangered fish species, and may represent a valuable tool for the regulation and sustainable management of fishery resources.Departamento de Oceanografia e Ecologia Base Oceanogr�fica Universidade Federal do Esp�rito Santo (UFES), Rodovia ES 10 km 16, 565, CoqueiralLaborat�rio de Gen�tica da Conserva��o PUCMINAS-Pontif�cia Universidade Cat�lica de Minas Gerais, Av. Dom Jos� Gaspar 500, Cora��o Eucar�sticoLaborat�rio de Biologia e Gen�tica de Peixes Departamento de Morfologia Instituto de Bioci�ncias de Botucatu Universidade Estadual Paulista (UNESP), Distrito de Rubi�o Junior, s/nLaboratorio Costero de Tumbes Instituto del Mar del Per� (IMARPE), Calle Jos� Olaya S/N, Nueva EsperanzaDepartamento de Ci�ncias do Mar Instituto do Mar Universidade Federal de S�o Paulo (UNIFESP), Av. Alm. Saldanha da Gama, 89, Ponta da PraiaCosta Lima Aquicultura e Pesca, Pra�a Prefeito Jos� Luiz da Costa, 27, CentroDepartamento de Ci�ncias Agr�rias e Biol�gicas Universidade Federal do Esp�rito Santo (UFES), Rodovia BR 101 Norte, Km 60, Litor�neoLaborat�rio de Biologia e Gen�tica de Peixes Departamento de Morfologia Instituto de Bioci�ncias de Botucatu Universidade Estadual Paulista (UNESP), Distrito de Rubi�o Junior, s/nUniversidade Federal do Esp�rito Santo (UFES)PUCMINAS-Pontif�cia Universidade Cat�lica de Minas GeraisUniversidade Estadual Paulista (Unesp)Instituto del Mar del Per� (IMARPE)Universidade Federal de São Paulo (UNIFESP)Costa Lima Aquicultura e PescaDamasceno, J�nio S.Siccha-Ramirez, Raquel [UNESP]Oliveira, Claudio [UNESP]Mendon�a, Fernando F.Lima, Arthur C.Machado, Leonardo F. [UNESP]Tosta, Vander C.Farro, Ana Paula C.Hostim-Silva, Maur�cio2018-12-11T17:06:09Z2018-12-11T17:06:09Z2016-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://dx.doi.org/10.1590/1982-0224-20150128Neotropical Ichthyology, v. 14, n. 3, 2016.1982-02241679-6225http://hdl.handle.net/11449/17353710.1590/1982-0224-20150128S1679-622520160003002032-s2.0-84988934625S1679-62252016000300203.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengNeotropical Ichthyology0,559info:eu-repo/semantics/openAccess2024-10-14T19:14:43Zoai:repositorio.unesp.br:11449/173537Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-10-14T19:14:43Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR |
title |
Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR |
spellingShingle |
Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR Damasceno, J�nio S. COI Conservation genetics Endangered species Fishery management Forensic genetics |
title_short |
Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR |
title_full |
Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR |
title_fullStr |
Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR |
title_full_unstemmed |
Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR |
title_sort |
Molecular identification of Atlantic goliath grouper epinephelus itajara (Lichtenstein, 1822) (Perciformes: Epinephelidae) and related commercial species applying multiplex PCR |
author |
Damasceno, J�nio S. |
author_facet |
Damasceno, J�nio S. Siccha-Ramirez, Raquel [UNESP] Oliveira, Claudio [UNESP] Mendon�a, Fernando F. Lima, Arthur C. Machado, Leonardo F. [UNESP] Tosta, Vander C. Farro, Ana Paula C. Hostim-Silva, Maur�cio |
author_role |
author |
author2 |
Siccha-Ramirez, Raquel [UNESP] Oliveira, Claudio [UNESP] Mendon�a, Fernando F. Lima, Arthur C. Machado, Leonardo F. [UNESP] Tosta, Vander C. Farro, Ana Paula C. Hostim-Silva, Maur�cio |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal do Esp�rito Santo (UFES) PUCMINAS-Pontif�cia Universidade Cat�lica de Minas Gerais Universidade Estadual Paulista (Unesp) Instituto del Mar del Per� (IMARPE) Universidade Federal de São Paulo (UNIFESP) Costa Lima Aquicultura e Pesca |
dc.contributor.author.fl_str_mv |
Damasceno, J�nio S. Siccha-Ramirez, Raquel [UNESP] Oliveira, Claudio [UNESP] Mendon�a, Fernando F. Lima, Arthur C. Machado, Leonardo F. [UNESP] Tosta, Vander C. Farro, Ana Paula C. Hostim-Silva, Maur�cio |
dc.subject.por.fl_str_mv |
COI Conservation genetics Endangered species Fishery management Forensic genetics |
topic |
COI Conservation genetics Endangered species Fishery management Forensic genetics |
description |
The Atlantic goliath grouper, Epinephelus itajara, is a critically endangered species, threatened by illegal fishing and the destruction of its habitats. A number of other closely related grouper species found in the western Atlantic are also fished intensively. While some countries apply rigorous legislation, illegal harvesting followed by the falsification of fish products, which impedes the correct identification of the species, is a common practice, allowing the catch to be marketed as a different grouper species. In this case, molecular techniques represent an important tool for the monitoring and regulation of fishery practices, and are essential for the forensic identification of a number of different species. In the present study, species-specific primers were developed for the Cytochrome Oxidase subunit I gene, which were applied in a multiplex PCR for the simultaneous identification of nine different species of Epinephelidae: Epinephelus itajara, E. quinquefasciatus, E. morio, Hyporthodus flavolimbatus, H. niveatus, Mycteroperca acutirostris, M. bonaci, M. marginata, and M. microlepis. Multiplex PCR is a rapid, reliable and cost-effective procedure for the identification of commercially-valuable endangered fish species, and may represent a valuable tool for the regulation and sustainable management of fishery resources. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-01-01 2018-12-11T17:06:09Z 2018-12-11T17:06:09Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/1982-0224-20150128 Neotropical Ichthyology, v. 14, n. 3, 2016. 1982-0224 1679-6225 http://hdl.handle.net/11449/173537 10.1590/1982-0224-20150128 S1679-62252016000300203 2-s2.0-84988934625 S1679-62252016000300203.pdf |
url |
http://dx.doi.org/10.1590/1982-0224-20150128 http://hdl.handle.net/11449/173537 |
identifier_str_mv |
Neotropical Ichthyology, v. 14, n. 3, 2016. 1982-0224 1679-6225 10.1590/1982-0224-20150128 S1679-62252016000300203 2-s2.0-84988934625 S1679-62252016000300203.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Neotropical Ichthyology 0,559 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
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UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
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Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
repositoriounesp@unesp.br |
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1834483115732500480 |