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Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in Arabidopsis

Detalhes bibliográficos
Autor(a) principal: Pham, Phuong Anh
Data de Publicação: 2015
Outros Autores: Wahl, Vanessa, Tohge, Takayuki, Souza, Laise Rosado de, Zhang, Youjun, Do, Phuc Thi, Olas, Justyna J., Stitt, Mark, Araújo, Wagner L., Fernie, Alisdair R.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: http://dx.doi.org/10.1007/s11103-015-0363-5
http://www.locus.ufv.br/handle/123456789/14553
Resumo: The enzyme poly(ADP-ribose)polymerase (PARP) has a dual function being involved both in the poly(ADP-ribosyl)ation and being a constituent of the NAD+ salvage pathway. To date most studies, both in plant and non-plant systems, have focused on the signaling role of PARP in poly(ADP-ribosyl)ation rather than any role that can be ascribed to its metabolic function. In order to address this question we here used a combination of expression, transcript and protein localization studies of all three PARP isoforms of Arabidopsis alongside physiological analysis of the corresponding mutants. Our analyses indicated that whilst all isoforms of PARP were localized to the nucleus they are also present in non-nuclear locations with parp1 and parp3 also localised in the cytosol, and parp2 also present in the mitochondria. We next isolated and characterized insertional knockout mutants of all three isoforms confirming a complete knockout in the full length transcript levels of the target genes as well as a reduced total leaf NAD hydrolase activity in the two isoforms (PARP1, PARP2) that are highly expressed in leaves. Physiological evaluation of the mutant lines revealed that they displayed distinctive metabolic and root growth characteristics albeit unaltered leaf morphology under optimal growth conditions. We therefore conclude that the PARP isoforms play non-redundant non-nuclear metabolic roles and that their function is highly important in rapidly growing tissues such as the shoot apical meristem, roots and seeds.
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spelling Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in ArabidopsisArabidopsis thalianaCentral carbon metabolismT-DNA mutantsMetabolite profilingNAD(P)(H) metabolismPoly(ADP-ribose)polymeraseRootThe enzyme poly(ADP-ribose)polymerase (PARP) has a dual function being involved both in the poly(ADP-ribosyl)ation and being a constituent of the NAD+ salvage pathway. To date most studies, both in plant and non-plant systems, have focused on the signaling role of PARP in poly(ADP-ribosyl)ation rather than any role that can be ascribed to its metabolic function. In order to address this question we here used a combination of expression, transcript and protein localization studies of all three PARP isoforms of Arabidopsis alongside physiological analysis of the corresponding mutants. Our analyses indicated that whilst all isoforms of PARP were localized to the nucleus they are also present in non-nuclear locations with parp1 and parp3 also localised in the cytosol, and parp2 also present in the mitochondria. We next isolated and characterized insertional knockout mutants of all three isoforms confirming a complete knockout in the full length transcript levels of the target genes as well as a reduced total leaf NAD hydrolase activity in the two isoforms (PARP1, PARP2) that are highly expressed in leaves. Physiological evaluation of the mutant lines revealed that they displayed distinctive metabolic and root growth characteristics albeit unaltered leaf morphology under optimal growth conditions. We therefore conclude that the PARP isoforms play non-redundant non-nuclear metabolic roles and that their function is highly important in rapidly growing tissues such as the shoot apical meristem, roots and seeds.Plant Molecular Biology2017-12-07T11:27:02Z2017-12-07T11:27:02Z2015-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlepdfapplication/pdf0167-4412http://dx.doi.org/10.1007/s11103-015-0363-5http://www.locus.ufv.br/handle/123456789/14553engVolume 89, Issue 4–5, p. 319–338, November 2015Pham, Phuong AnhWahl, VanessaTohge, TakayukiSouza, Laise Rosado deZhang, YoujunDo, Phuc ThiOlas, Justyna J.Stitt, MarkAraújo, Wagner L.Fernie, Alisdair R.info:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFV2024-07-12T08:25:30Zoai:locus.ufv.br:123456789/14553Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452024-07-12T08:25:30LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.none.fl_str_mv Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in Arabidopsis
title Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in Arabidopsis
spellingShingle Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in Arabidopsis
Pham, Phuong Anh
Arabidopsis thaliana
Central carbon metabolism
T-DNA mutants
Metabolite profiling
NAD(P)(H) metabolism
Poly(ADP-ribose)polymerase
Root
title_short Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in Arabidopsis
title_full Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in Arabidopsis
title_fullStr Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in Arabidopsis
title_full_unstemmed Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in Arabidopsis
title_sort Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in Arabidopsis
author Pham, Phuong Anh
author_facet Pham, Phuong Anh
Wahl, Vanessa
Tohge, Takayuki
Souza, Laise Rosado de
Zhang, Youjun
Do, Phuc Thi
Olas, Justyna J.
Stitt, Mark
Araújo, Wagner L.
Fernie, Alisdair R.
author_role author
author2 Wahl, Vanessa
Tohge, Takayuki
Souza, Laise Rosado de
Zhang, Youjun
Do, Phuc Thi
Olas, Justyna J.
Stitt, Mark
Araújo, Wagner L.
Fernie, Alisdair R.
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Pham, Phuong Anh
Wahl, Vanessa
Tohge, Takayuki
Souza, Laise Rosado de
Zhang, Youjun
Do, Phuc Thi
Olas, Justyna J.
Stitt, Mark
Araújo, Wagner L.
Fernie, Alisdair R.
dc.subject.por.fl_str_mv Arabidopsis thaliana
Central carbon metabolism
T-DNA mutants
Metabolite profiling
NAD(P)(H) metabolism
Poly(ADP-ribose)polymerase
Root
topic Arabidopsis thaliana
Central carbon metabolism
T-DNA mutants
Metabolite profiling
NAD(P)(H) metabolism
Poly(ADP-ribose)polymerase
Root
description The enzyme poly(ADP-ribose)polymerase (PARP) has a dual function being involved both in the poly(ADP-ribosyl)ation and being a constituent of the NAD+ salvage pathway. To date most studies, both in plant and non-plant systems, have focused on the signaling role of PARP in poly(ADP-ribosyl)ation rather than any role that can be ascribed to its metabolic function. In order to address this question we here used a combination of expression, transcript and protein localization studies of all three PARP isoforms of Arabidopsis alongside physiological analysis of the corresponding mutants. Our analyses indicated that whilst all isoforms of PARP were localized to the nucleus they are also present in non-nuclear locations with parp1 and parp3 also localised in the cytosol, and parp2 also present in the mitochondria. We next isolated and characterized insertional knockout mutants of all three isoforms confirming a complete knockout in the full length transcript levels of the target genes as well as a reduced total leaf NAD hydrolase activity in the two isoforms (PARP1, PARP2) that are highly expressed in leaves. Physiological evaluation of the mutant lines revealed that they displayed distinctive metabolic and root growth characteristics albeit unaltered leaf morphology under optimal growth conditions. We therefore conclude that the PARP isoforms play non-redundant non-nuclear metabolic roles and that their function is highly important in rapidly growing tissues such as the shoot apical meristem, roots and seeds.
publishDate 2015
dc.date.none.fl_str_mv 2015-10-01
2017-12-07T11:27:02Z
2017-12-07T11:27:02Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv 0167-4412
http://dx.doi.org/10.1007/s11103-015-0363-5
http://www.locus.ufv.br/handle/123456789/14553
identifier_str_mv 0167-4412
url http://dx.doi.org/10.1007/s11103-015-0363-5
http://www.locus.ufv.br/handle/123456789/14553
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Volume 89, Issue 4–5, p. 319–338, November 2015
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv pdf
application/pdf
dc.publisher.none.fl_str_mv Plant Molecular Biology
publisher.none.fl_str_mv Plant Molecular Biology
dc.source.none.fl_str_mv reponame:LOCUS Repositório Institucional da UFV
instname:Universidade Federal de Viçosa (UFV)
instacron:UFV
instname_str Universidade Federal de Viçosa (UFV)
instacron_str UFV
institution UFV
reponame_str LOCUS Repositório Institucional da UFV
collection LOCUS Repositório Institucional da UFV
repository.name.fl_str_mv LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)
repository.mail.fl_str_mv fabiojreis@ufv.br
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