INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS

Bibliographic Details
Main Author: NEPOMUCENO, Erivelton Geraldo
Publication Date: 2016
Other Authors: TAKAHASHI, Ricardo Hiroshi Caldeira, AGUIRRE, Luis Antonio
Format: Article
Language: eng
Source: Brazilian Journal of Biometrics
Download full: https://biometria.ufla.br/index.php/BBJ/article/view/95
Summary: A traditional approach to model infectious diseases is to use compartment models based on dierential equations, such as the SIR (Susceptible-Infected-Recovered) model. These models explain average behavior, but are inadequate to account for stochastic fluctuations of epidemiological variables. An alternative approach is to use Individual-Based Model (IBM), that represent each individual as a set of features that change dynamically over time. This allows modeling population phenomena as aggregates of individual interactions. This paper presents a general framework to model epidemiological systems using IBM as an alternative to replace or complement epidemiological compartment models. The proposed modeling approach is shown to allow the study of some phenomena which are related to nite-population demographic stochastic fluctuation. In particular, a procedure for the computation of the probability of disease eradication within a time horizon in the case of systems which have mean-field endemic equilibrium is presented as a direct application of the proposed approach. It is shown, how this general framework may be described as an algorithm suitable to model dierent types of compartment  models. Numerical simulations illustrate how this approach may provide greater insight about a great variety of epidemiological systems.
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spelling INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELSA traditional approach to model infectious diseases is to use compartment models based on dierential equations, such as the SIR (Susceptible-Infected-Recovered) model. These models explain average behavior, but are inadequate to account for stochastic fluctuations of epidemiological variables. An alternative approach is to use Individual-Based Model (IBM), that represent each individual as a set of features that change dynamically over time. This allows modeling population phenomena as aggregates of individual interactions. This paper presents a general framework to model epidemiological systems using IBM as an alternative to replace or complement epidemiological compartment models. The proposed modeling approach is shown to allow the study of some phenomena which are related to nite-population demographic stochastic fluctuation. In particular, a procedure for the computation of the probability of disease eradication within a time horizon in the case of systems which have mean-field endemic equilibrium is presented as a direct application of the proposed approach. It is shown, how this general framework may be described as an algorithm suitable to model dierent types of compartment  models. Numerical simulations illustrate how this approach may provide greater insight about a great variety of epidemiological systems.Editora UFLA - Universidade Federal de Lavras - UFLA2016-03-30info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionPeer-reviewed Articleapplication/pdfhttps://biometria.ufla.br/index.php/BBJ/article/view/95Brazilian Journal of Biometrics; Vol. 34 No. 1 (2016); 133-162REVISTA BRASILEIRA DE BIOMETRIA; v. 34 n. 1 (2016); 133-1622764-5290reponame:Brazilian Journal of Biometricsinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAenghttps://biometria.ufla.br/index.php/BBJ/article/view/95/34Copyright (c) 2016 Erivelton Geraldo NEPOMUCENO, Ricardo Hiroshi Caldeira TAKAHASHI, Luis Antonio AGUIRREinfo:eu-repo/semantics/openAccessNEPOMUCENO, Erivelton GeraldoTAKAHASHI, Ricardo Hiroshi CaldeiraAGUIRRE, Luis Antonio2016-06-15T14:16:36Zoai:biometria.ufla.br:article/95Revistahttps://biometria.ufla.br/index.php/BBJ/indexPUBhttps://biometria.ufla.br/index.php/BBJ/oaitales.jfernandes@ufla.br || scalon@ufla.br || biometria.des@ufla.br2764-52902764-5290opendoar:2016-06-15T14:16:36Brazilian Journal of Biometrics - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS
title INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS
spellingShingle INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS
NEPOMUCENO, Erivelton Geraldo
title_short INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS
title_full INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS
title_fullStr INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS
title_full_unstemmed INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS
title_sort INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS
author NEPOMUCENO, Erivelton Geraldo
author_facet NEPOMUCENO, Erivelton Geraldo
TAKAHASHI, Ricardo Hiroshi Caldeira
AGUIRRE, Luis Antonio
author_role author
author2 TAKAHASHI, Ricardo Hiroshi Caldeira
AGUIRRE, Luis Antonio
author2_role author
author
dc.contributor.author.fl_str_mv NEPOMUCENO, Erivelton Geraldo
TAKAHASHI, Ricardo Hiroshi Caldeira
AGUIRRE, Luis Antonio
description A traditional approach to model infectious diseases is to use compartment models based on dierential equations, such as the SIR (Susceptible-Infected-Recovered) model. These models explain average behavior, but are inadequate to account for stochastic fluctuations of epidemiological variables. An alternative approach is to use Individual-Based Model (IBM), that represent each individual as a set of features that change dynamically over time. This allows modeling population phenomena as aggregates of individual interactions. This paper presents a general framework to model epidemiological systems using IBM as an alternative to replace or complement epidemiological compartment models. The proposed modeling approach is shown to allow the study of some phenomena which are related to nite-population demographic stochastic fluctuation. In particular, a procedure for the computation of the probability of disease eradication within a time horizon in the case of systems which have mean-field endemic equilibrium is presented as a direct application of the proposed approach. It is shown, how this general framework may be described as an algorithm suitable to model dierent types of compartment  models. Numerical simulations illustrate how this approach may provide greater insight about a great variety of epidemiological systems.
publishDate 2016
dc.date.none.fl_str_mv 2016-03-30
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
Peer-reviewed Article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://biometria.ufla.br/index.php/BBJ/article/view/95
url https://biometria.ufla.br/index.php/BBJ/article/view/95
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://biometria.ufla.br/index.php/BBJ/article/view/95/34
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Editora UFLA - Universidade Federal de Lavras - UFLA
publisher.none.fl_str_mv Editora UFLA - Universidade Federal de Lavras - UFLA
dc.source.none.fl_str_mv Brazilian Journal of Biometrics; Vol. 34 No. 1 (2016); 133-162
REVISTA BRASILEIRA DE BIOMETRIA; v. 34 n. 1 (2016); 133-162
2764-5290
reponame:Brazilian Journal of Biometrics
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Brazilian Journal of Biometrics
collection Brazilian Journal of Biometrics
repository.name.fl_str_mv Brazilian Journal of Biometrics - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv tales.jfernandes@ufla.br || scalon@ufla.br || biometria.des@ufla.br
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