INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS
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Publication Date: | 2016 |
Other Authors: | , |
Format: | Article |
Language: | eng |
Source: | Brazilian Journal of Biometrics |
Download full: | https://biometria.ufla.br/index.php/BBJ/article/view/95 |
Summary: | A traditional approach to model infectious diseases is to use compartment models based on dierential equations, such as the SIR (Susceptible-Infected-Recovered) model. These models explain average behavior, but are inadequate to account for stochastic fluctuations of epidemiological variables. An alternative approach is to use Individual-Based Model (IBM), that represent each individual as a set of features that change dynamically over time. This allows modeling population phenomena as aggregates of individual interactions. This paper presents a general framework to model epidemiological systems using IBM as an alternative to replace or complement epidemiological compartment models. The proposed modeling approach is shown to allow the study of some phenomena which are related to nite-population demographic stochastic fluctuation. In particular, a procedure for the computation of the probability of disease eradication within a time horizon in the case of systems which have mean-field endemic equilibrium is presented as a direct application of the proposed approach. It is shown, how this general framework may be described as an algorithm suitable to model dierent types of compartment models. Numerical simulations illustrate how this approach may provide greater insight about a great variety of epidemiological systems. |
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INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELSA traditional approach to model infectious diseases is to use compartment models based on dierential equations, such as the SIR (Susceptible-Infected-Recovered) model. These models explain average behavior, but are inadequate to account for stochastic fluctuations of epidemiological variables. An alternative approach is to use Individual-Based Model (IBM), that represent each individual as a set of features that change dynamically over time. This allows modeling population phenomena as aggregates of individual interactions. This paper presents a general framework to model epidemiological systems using IBM as an alternative to replace or complement epidemiological compartment models. The proposed modeling approach is shown to allow the study of some phenomena which are related to nite-population demographic stochastic fluctuation. In particular, a procedure for the computation of the probability of disease eradication within a time horizon in the case of systems which have mean-field endemic equilibrium is presented as a direct application of the proposed approach. It is shown, how this general framework may be described as an algorithm suitable to model dierent types of compartment models. Numerical simulations illustrate how this approach may provide greater insight about a great variety of epidemiological systems.Editora UFLA - Universidade Federal de Lavras - UFLA2016-03-30info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionPeer-reviewed Articleapplication/pdfhttps://biometria.ufla.br/index.php/BBJ/article/view/95Brazilian Journal of Biometrics; Vol. 34 No. 1 (2016); 133-162REVISTA BRASILEIRA DE BIOMETRIA; v. 34 n. 1 (2016); 133-1622764-5290reponame:Brazilian Journal of Biometricsinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAenghttps://biometria.ufla.br/index.php/BBJ/article/view/95/34Copyright (c) 2016 Erivelton Geraldo NEPOMUCENO, Ricardo Hiroshi Caldeira TAKAHASHI, Luis Antonio AGUIRREinfo:eu-repo/semantics/openAccessNEPOMUCENO, Erivelton GeraldoTAKAHASHI, Ricardo Hiroshi CaldeiraAGUIRRE, Luis Antonio2016-06-15T14:16:36Zoai:biometria.ufla.br:article/95Revistahttps://biometria.ufla.br/index.php/BBJ/indexPUBhttps://biometria.ufla.br/index.php/BBJ/oaitales.jfernandes@ufla.br || scalon@ufla.br || biometria.des@ufla.br2764-52902764-5290opendoar:2016-06-15T14:16:36Brazilian Journal of Biometrics - Universidade Federal de Lavras (UFLA)false |
dc.title.none.fl_str_mv |
INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS |
title |
INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS |
spellingShingle |
INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS NEPOMUCENO, Erivelton Geraldo |
title_short |
INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS |
title_full |
INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS |
title_fullStr |
INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS |
title_full_unstemmed |
INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS |
title_sort |
INDIVIDUAL-BASED MODEL (IBM): AN ALTERNATIVE FRAMEWORK FOR EPIDEMIOLOGICAL COMPARTMENT MODELS |
author |
NEPOMUCENO, Erivelton Geraldo |
author_facet |
NEPOMUCENO, Erivelton Geraldo TAKAHASHI, Ricardo Hiroshi Caldeira AGUIRRE, Luis Antonio |
author_role |
author |
author2 |
TAKAHASHI, Ricardo Hiroshi Caldeira AGUIRRE, Luis Antonio |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
NEPOMUCENO, Erivelton Geraldo TAKAHASHI, Ricardo Hiroshi Caldeira AGUIRRE, Luis Antonio |
description |
A traditional approach to model infectious diseases is to use compartment models based on dierential equations, such as the SIR (Susceptible-Infected-Recovered) model. These models explain average behavior, but are inadequate to account for stochastic fluctuations of epidemiological variables. An alternative approach is to use Individual-Based Model (IBM), that represent each individual as a set of features that change dynamically over time. This allows modeling population phenomena as aggregates of individual interactions. This paper presents a general framework to model epidemiological systems using IBM as an alternative to replace or complement epidemiological compartment models. The proposed modeling approach is shown to allow the study of some phenomena which are related to nite-population demographic stochastic fluctuation. In particular, a procedure for the computation of the probability of disease eradication within a time horizon in the case of systems which have mean-field endemic equilibrium is presented as a direct application of the proposed approach. It is shown, how this general framework may be described as an algorithm suitable to model dierent types of compartment models. Numerical simulations illustrate how this approach may provide greater insight about a great variety of epidemiological systems. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-03-30 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion Peer-reviewed Article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://biometria.ufla.br/index.php/BBJ/article/view/95 |
url |
https://biometria.ufla.br/index.php/BBJ/article/view/95 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://biometria.ufla.br/index.php/BBJ/article/view/95/34 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Editora UFLA - Universidade Federal de Lavras - UFLA |
publisher.none.fl_str_mv |
Editora UFLA - Universidade Federal de Lavras - UFLA |
dc.source.none.fl_str_mv |
Brazilian Journal of Biometrics; Vol. 34 No. 1 (2016); 133-162 REVISTA BRASILEIRA DE BIOMETRIA; v. 34 n. 1 (2016); 133-162 2764-5290 reponame:Brazilian Journal of Biometrics instname:Universidade Federal de Lavras (UFLA) instacron:UFLA |
instname_str |
Universidade Federal de Lavras (UFLA) |
instacron_str |
UFLA |
institution |
UFLA |
reponame_str |
Brazilian Journal of Biometrics |
collection |
Brazilian Journal of Biometrics |
repository.name.fl_str_mv |
Brazilian Journal of Biometrics - Universidade Federal de Lavras (UFLA) |
repository.mail.fl_str_mv |
tales.jfernandes@ufla.br || scalon@ufla.br || biometria.des@ufla.br |
_version_ |
1839722765761904640 |