Genetic diversity in accessions of lima bean (Phaseolus lunatus L.) determined from agro-morphological descriptors and SSR markers for use in breeding programs in Brazil

Bibliographic Details
Main Author: de Jesus Pires C.
Publication Date: 2022
Other Authors: Costa M.F., Zucchi M.I., Ferreira-Gomes R.L., Pinheiro J.B., Viana J.P.G., Assuncao-Filho J.R., de Almeida Lopes A.C., Bajay, Miklos Maximiliano
Format: Article
Language: eng
Source: Repositório Institucional da Udesc
dARK ID: ark:/33523/001300000v8g4
Download full: https://repositorio.udesc.br/handle/UDESC/3086
Summary: © 2021, The Author(s), under exclusive licence to Springer Nature B.V.Lima bean (Phaseolus lunatus L.) have high genetic diversity, especially in Brazil, which has been maintained both on farms and in germplasm banks. Knowledge of the genetic diversity of germplasm in landraces is important for the development of breeding programs. We investigated the genetic diversity of lima bean landraces accessed in the Phaseolus Germplasm Bank of the Federal University of Piauí (PGB-UFPI, Brazil), using agro-morphological and microsatellite markers (SSRs). We analyzed 26 qualitative and 11 quantitative traits, following the Bioversity International descriptors. Furthermore, 15 SSRs were used to determine the genetic polymorphism and genetic differentiation among genotypes. The agro-morphological traits and SSR markers were reliable and effective for determining the genetic diversity of the accessions. Cluster analysis revealed a considerable phenotypic diversity among the accessions for some characters related to agronomic performance, such as the number of pods per plant, number of seeds per pod, and weight of 100 seeds. At the molecular level, ten loci showed polymorphism; the number of alleles per locus varied from two to seven, with mean polymorphism information content of 0.282 per locus. Loci GATS91 and PVat001 were highly informative and are indicated for further studies of lima bean. The accessions constitute an important gene pool for future breeding programs, especially accession UFPI-262. Accessions UFPI-262 and UFPI-252 can be used in crosses, as they are genetically distant and complementary in their characteristics.
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spelling Genetic diversity in accessions of lima bean (Phaseolus lunatus L.) determined from agro-morphological descriptors and SSR markers for use in breeding programs in Brazil© 2021, The Author(s), under exclusive licence to Springer Nature B.V.Lima bean (Phaseolus lunatus L.) have high genetic diversity, especially in Brazil, which has been maintained both on farms and in germplasm banks. Knowledge of the genetic diversity of germplasm in landraces is important for the development of breeding programs. We investigated the genetic diversity of lima bean landraces accessed in the Phaseolus Germplasm Bank of the Federal University of Piauí (PGB-UFPI, Brazil), using agro-morphological and microsatellite markers (SSRs). We analyzed 26 qualitative and 11 quantitative traits, following the Bioversity International descriptors. Furthermore, 15 SSRs were used to determine the genetic polymorphism and genetic differentiation among genotypes. The agro-morphological traits and SSR markers were reliable and effective for determining the genetic diversity of the accessions. Cluster analysis revealed a considerable phenotypic diversity among the accessions for some characters related to agronomic performance, such as the number of pods per plant, number of seeds per pod, and weight of 100 seeds. At the molecular level, ten loci showed polymorphism; the number of alleles per locus varied from two to seven, with mean polymorphism information content of 0.282 per locus. Loci GATS91 and PVat001 were highly informative and are indicated for further studies of lima bean. The accessions constitute an important gene pool for future breeding programs, especially accession UFPI-262. Accessions UFPI-262 and UFPI-252 can be used in crosses, as they are genetically distant and complementary in their characteristics.2024-12-05T22:56:31Z2022info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlep. 973 - 9861573-510910.1007/s10722-021-01272-8https://repositorio.udesc.br/handle/UDESC/3086ark:/33523/001300000v8g4Genetic Resources and Crop Evolution693de Jesus Pires C.Costa M.F.Zucchi M.I.Ferreira-Gomes R.L.Pinheiro J.B.Viana J.P.G.Assuncao-Filho J.R.de Almeida Lopes A.C.Bajay, Miklos Maximilianoengreponame:Repositório Institucional da Udescinstname:Universidade do Estado de Santa Catarina (UDESC)instacron:UDESCinfo:eu-repo/semantics/openAccess2024-12-07T20:40:42Zoai:repositorio.udesc.br:UDESC/3086Biblioteca Digital de Teses e Dissertaçõeshttps://pergamumweb.udesc.br/biblioteca/index.phpPRIhttps://repositorio-api.udesc.br/server/oai/requestri@udesc.bropendoar:63912024-12-07T20:40:42Repositório Institucional da Udesc - Universidade do Estado de Santa Catarina (UDESC)false
dc.title.none.fl_str_mv Genetic diversity in accessions of lima bean (Phaseolus lunatus L.) determined from agro-morphological descriptors and SSR markers for use in breeding programs in Brazil
title Genetic diversity in accessions of lima bean (Phaseolus lunatus L.) determined from agro-morphological descriptors and SSR markers for use in breeding programs in Brazil
spellingShingle Genetic diversity in accessions of lima bean (Phaseolus lunatus L.) determined from agro-morphological descriptors and SSR markers for use in breeding programs in Brazil
de Jesus Pires C.
title_short Genetic diversity in accessions of lima bean (Phaseolus lunatus L.) determined from agro-morphological descriptors and SSR markers for use in breeding programs in Brazil
title_full Genetic diversity in accessions of lima bean (Phaseolus lunatus L.) determined from agro-morphological descriptors and SSR markers for use in breeding programs in Brazil
title_fullStr Genetic diversity in accessions of lima bean (Phaseolus lunatus L.) determined from agro-morphological descriptors and SSR markers for use in breeding programs in Brazil
title_full_unstemmed Genetic diversity in accessions of lima bean (Phaseolus lunatus L.) determined from agro-morphological descriptors and SSR markers for use in breeding programs in Brazil
title_sort Genetic diversity in accessions of lima bean (Phaseolus lunatus L.) determined from agro-morphological descriptors and SSR markers for use in breeding programs in Brazil
author de Jesus Pires C.
author_facet de Jesus Pires C.
Costa M.F.
Zucchi M.I.
Ferreira-Gomes R.L.
Pinheiro J.B.
Viana J.P.G.
Assuncao-Filho J.R.
de Almeida Lopes A.C.
Bajay, Miklos Maximiliano
author_role author
author2 Costa M.F.
Zucchi M.I.
Ferreira-Gomes R.L.
Pinheiro J.B.
Viana J.P.G.
Assuncao-Filho J.R.
de Almeida Lopes A.C.
Bajay, Miklos Maximiliano
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv de Jesus Pires C.
Costa M.F.
Zucchi M.I.
Ferreira-Gomes R.L.
Pinheiro J.B.
Viana J.P.G.
Assuncao-Filho J.R.
de Almeida Lopes A.C.
Bajay, Miklos Maximiliano
description © 2021, The Author(s), under exclusive licence to Springer Nature B.V.Lima bean (Phaseolus lunatus L.) have high genetic diversity, especially in Brazil, which has been maintained both on farms and in germplasm banks. Knowledge of the genetic diversity of germplasm in landraces is important for the development of breeding programs. We investigated the genetic diversity of lima bean landraces accessed in the Phaseolus Germplasm Bank of the Federal University of Piauí (PGB-UFPI, Brazil), using agro-morphological and microsatellite markers (SSRs). We analyzed 26 qualitative and 11 quantitative traits, following the Bioversity International descriptors. Furthermore, 15 SSRs were used to determine the genetic polymorphism and genetic differentiation among genotypes. The agro-morphological traits and SSR markers were reliable and effective for determining the genetic diversity of the accessions. Cluster analysis revealed a considerable phenotypic diversity among the accessions for some characters related to agronomic performance, such as the number of pods per plant, number of seeds per pod, and weight of 100 seeds. At the molecular level, ten loci showed polymorphism; the number of alleles per locus varied from two to seven, with mean polymorphism information content of 0.282 per locus. Loci GATS91 and PVat001 were highly informative and are indicated for further studies of lima bean. The accessions constitute an important gene pool for future breeding programs, especially accession UFPI-262. Accessions UFPI-262 and UFPI-252 can be used in crosses, as they are genetically distant and complementary in their characteristics.
publishDate 2022
dc.date.none.fl_str_mv 2022
2024-12-05T22:56:31Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv 1573-5109
10.1007/s10722-021-01272-8
https://repositorio.udesc.br/handle/UDESC/3086
dc.identifier.dark.fl_str_mv ark:/33523/001300000v8g4
identifier_str_mv 1573-5109
10.1007/s10722-021-01272-8
ark:/33523/001300000v8g4
url https://repositorio.udesc.br/handle/UDESC/3086
dc.language.iso.fl_str_mv eng
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dc.relation.none.fl_str_mv Genetic Resources and Crop Evolution
69
3
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dc.format.none.fl_str_mv p. 973 - 986
dc.source.none.fl_str_mv reponame:Repositório Institucional da Udesc
instname:Universidade do Estado de Santa Catarina (UDESC)
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instname_str Universidade do Estado de Santa Catarina (UDESC)
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institution UDESC
reponame_str Repositório Institucional da Udesc
collection Repositório Institucional da Udesc
repository.name.fl_str_mv Repositório Institucional da Udesc - Universidade do Estado de Santa Catarina (UDESC)
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