Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene
| Autor(a) principal: | |
|---|---|
| Data de Publicação: | 2010 |
| Outros Autores: | , , , , , , |
| Tipo de documento: | Artigo |
| Idioma: | eng |
| Título da fonte: | Genetics and Molecular Biology |
| Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300015 |
Resumo: | Progesterone plays an important role in sow reproduction by stimulating classic genomic pathways via nuclear receptors and non-genomic pathways via membrane receptors such a progesterone receptor membrane component 2 (PGRMC2). In this work, we used radiation hybrid mapping to assign PGRMC2 to pig chromosome 8 and observed that this receptor has two transcripts in pigs. The full-length cDNA of the large transcript is 1858 bp long and contains a 669-bp open reading frame (ORF) encoding a protein of 223 amino acids. The shorter transcript encodes a protein of 170 amino acids. The porcine PGRMC2 gene consists of three exons 446 bp, 156 bp and 1259 bp in length. The promoter sequence is GC-rich and lacks a typical TATA box. Several putative cis-regulatory DNA motifs were identified in the 208-bp upstream genomic region. Five single nucleotide polymorphisms (SNPs) were detected in introns* and the 3' UTR. RT-PCR indicated that the PGRMC2 gene is expressed ubiquitously in all pig tissues examined. |
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Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) geneexpression profilemolecular characterizationphysical mappingProgesterone plays an important role in sow reproduction by stimulating classic genomic pathways via nuclear receptors and non-genomic pathways via membrane receptors such a progesterone receptor membrane component 2 (PGRMC2). In this work, we used radiation hybrid mapping to assign PGRMC2 to pig chromosome 8 and observed that this receptor has two transcripts in pigs. The full-length cDNA of the large transcript is 1858 bp long and contains a 669-bp open reading frame (ORF) encoding a protein of 223 amino acids. The shorter transcript encodes a protein of 170 amino acids. The porcine PGRMC2 gene consists of three exons 446 bp, 156 bp and 1259 bp in length. The promoter sequence is GC-rich and lacks a typical TATA box. Several putative cis-regulatory DNA motifs were identified in the 208-bp upstream genomic region. Five single nucleotide polymorphisms (SNPs) were detected in introns* and the 3' UTR. RT-PCR indicated that the PGRMC2 gene is expressed ubiquitously in all pig tissues examined.Sociedade Brasileira de Genética2010-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300015Genetics and Molecular Biology v.33 n.3 2010reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572010005000057info:eu-repo/semantics/openAccessChen,CongyingSargent,CaroleQuilter,ClaireYang,ZhuqingRen,JunAffara,NabeelBrenig,BertramHuang,Lushengeng2010-08-18T00:00:00Zoai:scielo:S1415-47572010000300015Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2010-08-18T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false |
| dc.title.none.fl_str_mv |
Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene |
| title |
Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene |
| spellingShingle |
Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene Chen,Congying expression profile molecular characterization physical mapping |
| title_short |
Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene |
| title_full |
Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene |
| title_fullStr |
Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene |
| title_full_unstemmed |
Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene |
| title_sort |
Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene |
| author |
Chen,Congying |
| author_facet |
Chen,Congying Sargent,Carole Quilter,Claire Yang,Zhuqing Ren,Jun Affara,Nabeel Brenig,Bertram Huang,Lusheng |
| author_role |
author |
| author2 |
Sargent,Carole Quilter,Claire Yang,Zhuqing Ren,Jun Affara,Nabeel Brenig,Bertram Huang,Lusheng |
| author2_role |
author author author author author author author |
| dc.contributor.author.fl_str_mv |
Chen,Congying Sargent,Carole Quilter,Claire Yang,Zhuqing Ren,Jun Affara,Nabeel Brenig,Bertram Huang,Lusheng |
| dc.subject.por.fl_str_mv |
expression profile molecular characterization physical mapping |
| topic |
expression profile molecular characterization physical mapping |
| description |
Progesterone plays an important role in sow reproduction by stimulating classic genomic pathways via nuclear receptors and non-genomic pathways via membrane receptors such a progesterone receptor membrane component 2 (PGRMC2). In this work, we used radiation hybrid mapping to assign PGRMC2 to pig chromosome 8 and observed that this receptor has two transcripts in pigs. The full-length cDNA of the large transcript is 1858 bp long and contains a 669-bp open reading frame (ORF) encoding a protein of 223 amino acids. The shorter transcript encodes a protein of 170 amino acids. The porcine PGRMC2 gene consists of three exons 446 bp, 156 bp and 1259 bp in length. The promoter sequence is GC-rich and lacks a typical TATA box. Several putative cis-regulatory DNA motifs were identified in the 208-bp upstream genomic region. Five single nucleotide polymorphisms (SNPs) were detected in introns* and the 3' UTR. RT-PCR indicated that the PGRMC2 gene is expressed ubiquitously in all pig tissues examined. |
| publishDate |
2010 |
| dc.date.none.fl_str_mv |
2010-01-01 |
| dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
| dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| format |
article |
| status_str |
publishedVersion |
| dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300015 |
| url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300015 |
| dc.language.iso.fl_str_mv |
eng |
| language |
eng |
| dc.relation.none.fl_str_mv |
10.1590/S1415-47572010005000057 |
| dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
| eu_rights_str_mv |
openAccess |
| dc.format.none.fl_str_mv |
text/html |
| dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
| publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
| dc.source.none.fl_str_mv |
Genetics and Molecular Biology v.33 n.3 2010 reponame:Genetics and Molecular Biology instname:Sociedade Brasileira de Genética (SBG) instacron:SBG |
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Sociedade Brasileira de Genética (SBG) |
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SBG |
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SBG |
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Genetics and Molecular Biology |
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Genetics and Molecular Biology |
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Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG) |
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||editor@gmb.org.br |
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1752122383278276608 |