Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene

Detalhes bibliográficos
Autor(a) principal: Chen,Congying
Data de Publicação: 2010
Outros Autores: Sargent,Carole, Quilter,Claire, Yang,Zhuqing, Ren,Jun, Affara,Nabeel, Brenig,Bertram, Huang,Lusheng
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300015
Resumo: Progesterone plays an important role in sow reproduction by stimulating classic genomic pathways via nuclear receptors and non-genomic pathways via membrane receptors such a progesterone receptor membrane component 2 (PGRMC2). In this work, we used radiation hybrid mapping to assign PGRMC2 to pig chromosome 8 and observed that this receptor has two transcripts in pigs. The full-length cDNA of the large transcript is 1858 bp long and contains a 669-bp open reading frame (ORF) encoding a protein of 223 amino acids. The shorter transcript encodes a protein of 170 amino acids. The porcine PGRMC2 gene consists of three exons 446 bp, 156 bp and 1259 bp in length. The promoter sequence is GC-rich and lacks a typical TATA box. Several putative cis-regulatory DNA motifs were identified in the 208-bp upstream genomic region. Five single nucleotide polymorphisms (SNPs) were detected in introns* and the 3' UTR. RT-PCR indicated that the PGRMC2 gene is expressed ubiquitously in all pig tissues examined.
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spelling Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) geneexpression profilemolecular characterizationphysical mappingProgesterone plays an important role in sow reproduction by stimulating classic genomic pathways via nuclear receptors and non-genomic pathways via membrane receptors such a progesterone receptor membrane component 2 (PGRMC2). In this work, we used radiation hybrid mapping to assign PGRMC2 to pig chromosome 8 and observed that this receptor has two transcripts in pigs. The full-length cDNA of the large transcript is 1858 bp long and contains a 669-bp open reading frame (ORF) encoding a protein of 223 amino acids. The shorter transcript encodes a protein of 170 amino acids. The porcine PGRMC2 gene consists of three exons 446 bp, 156 bp and 1259 bp in length. The promoter sequence is GC-rich and lacks a typical TATA box. Several putative cis-regulatory DNA motifs were identified in the 208-bp upstream genomic region. Five single nucleotide polymorphisms (SNPs) were detected in introns* and the 3' UTR. RT-PCR indicated that the PGRMC2 gene is expressed ubiquitously in all pig tissues examined.Sociedade Brasileira de Genética2010-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300015Genetics and Molecular Biology v.33 n.3 2010reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572010005000057info:eu-repo/semantics/openAccessChen,CongyingSargent,CaroleQuilter,ClaireYang,ZhuqingRen,JunAffara,NabeelBrenig,BertramHuang,Lushengeng2010-08-18T00:00:00Zoai:scielo:S1415-47572010000300015Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2010-08-18T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene
title Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene
spellingShingle Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene
Chen,Congying
expression profile
molecular characterization
physical mapping
title_short Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene
title_full Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene
title_fullStr Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene
title_full_unstemmed Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene
title_sort Cloning, mapping and molecular characterization of porcine progesterone receptor membrane component 2 (PGRMC2) gene
author Chen,Congying
author_facet Chen,Congying
Sargent,Carole
Quilter,Claire
Yang,Zhuqing
Ren,Jun
Affara,Nabeel
Brenig,Bertram
Huang,Lusheng
author_role author
author2 Sargent,Carole
Quilter,Claire
Yang,Zhuqing
Ren,Jun
Affara,Nabeel
Brenig,Bertram
Huang,Lusheng
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Chen,Congying
Sargent,Carole
Quilter,Claire
Yang,Zhuqing
Ren,Jun
Affara,Nabeel
Brenig,Bertram
Huang,Lusheng
dc.subject.por.fl_str_mv expression profile
molecular characterization
physical mapping
topic expression profile
molecular characterization
physical mapping
description Progesterone plays an important role in sow reproduction by stimulating classic genomic pathways via nuclear receptors and non-genomic pathways via membrane receptors such a progesterone receptor membrane component 2 (PGRMC2). In this work, we used radiation hybrid mapping to assign PGRMC2 to pig chromosome 8 and observed that this receptor has two transcripts in pigs. The full-length cDNA of the large transcript is 1858 bp long and contains a 669-bp open reading frame (ORF) encoding a protein of 223 amino acids. The shorter transcript encodes a protein of 170 amino acids. The porcine PGRMC2 gene consists of three exons 446 bp, 156 bp and 1259 bp in length. The promoter sequence is GC-rich and lacks a typical TATA box. Several putative cis-regulatory DNA motifs were identified in the 208-bp upstream genomic region. Five single nucleotide polymorphisms (SNPs) were detected in introns* and the 3' UTR. RT-PCR indicated that the PGRMC2 gene is expressed ubiquitously in all pig tissues examined.
publishDate 2010
dc.date.none.fl_str_mv 2010-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300015
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300015
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572010005000057
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.33 n.3 2010
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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