Realistic deformable 3D numeric phantom for transcutaneous ultrasound

Bibliographic Details
Main Author: Cardoso,Fernando Mitsuyama
Publication Date: 2017
Other Authors: Moraes,Matheus Cardoso, Furuie,Sergio Shiguemi
Format: Article
Language: eng
Source: Research on Biomedical Engineering (Online)
Download full: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2446-47402017000100001
Summary: Abstract Introduction Numerical phantoms are important tools to design, calibrate and evaluate several methods in various image-processing applications, such as echocardiography and mammography. We present a framework for creating ultrasound numerical deformable phantoms based on Finite Element Method (FEM), Linear Isomorphism and Field II. The proposed method considers that the scatterers map is a property of the tissue; therefore, the scatterers should move according to the tissue strain. Methods First, a volume representing the target tissue is loaded. Second, parameter values, such as Young’s Modulus, scatterers density, attenuation and scattering amplitudes are inserted for each different regions of the phantom. Then, other parameters related to the ultrasound equipment, such as ultrasound frequency and number of transducer elements, are also defined in order to perform the ultrasound acquisition using Field II. Third, the size and position of the transducer and the pressures that are applied against the tissue are defined. Subsequently, FEM is executed and deformation is computed. Next, 3D linear isomorphism is performed to displace the scatterers according to the deformation. Finally, Field II is carried out to generate the non-deformed and deformed ultrasound data. Results The framework is evaluated by comparing strain values obtained the numerical simulation and from the physical phantom from CIRS. The mean difference between both phantoms is lesser than 10%. Conclusion The acoustic and deformation outcomes are similar to those obtained using a physical phantom. This framework led to a tool, which is available online and free of charges for educational and research purposes.
id SBEB-1_3c4e1443d90bd63c07eddefaf6614a2f
oai_identifier_str oai:scielo:S2446-47402017000100001
network_acronym_str SBEB-1
network_name_str Research on Biomedical Engineering (Online)
repository_id_str
spelling Realistic deformable 3D numeric phantom for transcutaneous ultrasoundUltrasound imagesSimulationNumerical phantomsElasticityLinear isomorphismAbstract Introduction Numerical phantoms are important tools to design, calibrate and evaluate several methods in various image-processing applications, such as echocardiography and mammography. We present a framework for creating ultrasound numerical deformable phantoms based on Finite Element Method (FEM), Linear Isomorphism and Field II. The proposed method considers that the scatterers map is a property of the tissue; therefore, the scatterers should move according to the tissue strain. Methods First, a volume representing the target tissue is loaded. Second, parameter values, such as Young’s Modulus, scatterers density, attenuation and scattering amplitudes are inserted for each different regions of the phantom. Then, other parameters related to the ultrasound equipment, such as ultrasound frequency and number of transducer elements, are also defined in order to perform the ultrasound acquisition using Field II. Third, the size and position of the transducer and the pressures that are applied against the tissue are defined. Subsequently, FEM is executed and deformation is computed. Next, 3D linear isomorphism is performed to displace the scatterers according to the deformation. Finally, Field II is carried out to generate the non-deformed and deformed ultrasound data. Results The framework is evaluated by comparing strain values obtained the numerical simulation and from the physical phantom from CIRS. The mean difference between both phantoms is lesser than 10%. Conclusion The acoustic and deformation outcomes are similar to those obtained using a physical phantom. This framework led to a tool, which is available online and free of charges for educational and research purposes.Sociedade Brasileira de Engenharia Biomédica2017-03-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S2446-47402017000100001Research on Biomedical Engineering v.33 n.1 2017reponame:Research on Biomedical Engineering (Online)instname:Sociedade Brasileira de Engenharia Biomédica (SBEB)instacron:SBEB10.1590/2446-4740.05616info:eu-repo/semantics/openAccessCardoso,Fernando MitsuyamaMoraes,Matheus CardosoFuruie,Sergio Shiguemieng2017-07-04T00:00:00Zoai:scielo:S2446-47402017000100001Revistahttp://www.rbejournal.org/https://old.scielo.br/oai/scielo-oai.php||rbe@rbejournal.org2446-47402446-4732opendoar:2017-07-04T00:00Research on Biomedical Engineering (Online) - Sociedade Brasileira de Engenharia Biomédica (SBEB)false
dc.title.none.fl_str_mv Realistic deformable 3D numeric phantom for transcutaneous ultrasound
title Realistic deformable 3D numeric phantom for transcutaneous ultrasound
spellingShingle Realistic deformable 3D numeric phantom for transcutaneous ultrasound
Cardoso,Fernando Mitsuyama
Ultrasound images
Simulation
Numerical phantoms
Elasticity
Linear isomorphism
title_short Realistic deformable 3D numeric phantom for transcutaneous ultrasound
title_full Realistic deformable 3D numeric phantom for transcutaneous ultrasound
title_fullStr Realistic deformable 3D numeric phantom for transcutaneous ultrasound
title_full_unstemmed Realistic deformable 3D numeric phantom for transcutaneous ultrasound
title_sort Realistic deformable 3D numeric phantom for transcutaneous ultrasound
author Cardoso,Fernando Mitsuyama
author_facet Cardoso,Fernando Mitsuyama
Moraes,Matheus Cardoso
Furuie,Sergio Shiguemi
author_role author
author2 Moraes,Matheus Cardoso
Furuie,Sergio Shiguemi
author2_role author
author
dc.contributor.author.fl_str_mv Cardoso,Fernando Mitsuyama
Moraes,Matheus Cardoso
Furuie,Sergio Shiguemi
dc.subject.por.fl_str_mv Ultrasound images
Simulation
Numerical phantoms
Elasticity
Linear isomorphism
topic Ultrasound images
Simulation
Numerical phantoms
Elasticity
Linear isomorphism
description Abstract Introduction Numerical phantoms are important tools to design, calibrate and evaluate several methods in various image-processing applications, such as echocardiography and mammography. We present a framework for creating ultrasound numerical deformable phantoms based on Finite Element Method (FEM), Linear Isomorphism and Field II. The proposed method considers that the scatterers map is a property of the tissue; therefore, the scatterers should move according to the tissue strain. Methods First, a volume representing the target tissue is loaded. Second, parameter values, such as Young’s Modulus, scatterers density, attenuation and scattering amplitudes are inserted for each different regions of the phantom. Then, other parameters related to the ultrasound equipment, such as ultrasound frequency and number of transducer elements, are also defined in order to perform the ultrasound acquisition using Field II. Third, the size and position of the transducer and the pressures that are applied against the tissue are defined. Subsequently, FEM is executed and deformation is computed. Next, 3D linear isomorphism is performed to displace the scatterers according to the deformation. Finally, Field II is carried out to generate the non-deformed and deformed ultrasound data. Results The framework is evaluated by comparing strain values obtained the numerical simulation and from the physical phantom from CIRS. The mean difference between both phantoms is lesser than 10%. Conclusion The acoustic and deformation outcomes are similar to those obtained using a physical phantom. This framework led to a tool, which is available online and free of charges for educational and research purposes.
publishDate 2017
dc.date.none.fl_str_mv 2017-03-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2446-47402017000100001
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2446-47402017000100001
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/2446-4740.05616
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Engenharia Biomédica
publisher.none.fl_str_mv Sociedade Brasileira de Engenharia Biomédica
dc.source.none.fl_str_mv Research on Biomedical Engineering v.33 n.1 2017
reponame:Research on Biomedical Engineering (Online)
instname:Sociedade Brasileira de Engenharia Biomédica (SBEB)
instacron:SBEB
instname_str Sociedade Brasileira de Engenharia Biomédica (SBEB)
instacron_str SBEB
institution SBEB
reponame_str Research on Biomedical Engineering (Online)
collection Research on Biomedical Engineering (Online)
repository.name.fl_str_mv Research on Biomedical Engineering (Online) - Sociedade Brasileira de Engenharia Biomédica (SBEB)
repository.mail.fl_str_mv ||rbe@rbejournal.org
_version_ 1752126288729997312