Estimation of capture probabilities using generalized estimating equations and mixed effects approaches
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Outros Autores: | |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
Texto Completo: | http://hdl.handle.net/10174/13755 |
Resumo: | Modeling individual heterogeneity in capture probabilities has been one of the most challenging tasks in capture-recapture studies. Heterogeneity in capture probabilities can be modeled as a function of individual covariates, but correlation structure among capture occasions should be taking into account. A proposed generalized estimating equations (GEE) and generalized linear mixed modeling (GLMM) approaches can be used to estimate capture probabilities and population size for capture-recapture closed population models. An example is used for an illustrative application and for comparison with currently used methodology. A simulation study is also conducted to show the performance of the estimation procedures. Our simulation results show that the proposed quasi-likelihood based on GEE approach provides lower SE than partial likelihood based on either generalized linear models (GLM) or GLMM approaches for estimating population size in a closed capture-recapture experiment. Estimator performance is good if a large proportion of individuals are captured. For cases where only a small proportion of individuals are captured, the estimates become unstable, but the GEE approach outperforms the other methods. |
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Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
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https://opendoar.ac.uk/repository/7160 |
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Estimation of capture probabilities using generalized estimating equations and mixed effects approachesClosed populationGeneralized linear mixed modelsGeneralized linear modelsHeterogeneityPopulation size estimationModeling individual heterogeneity in capture probabilities has been one of the most challenging tasks in capture-recapture studies. Heterogeneity in capture probabilities can be modeled as a function of individual covariates, but correlation structure among capture occasions should be taking into account. A proposed generalized estimating equations (GEE) and generalized linear mixed modeling (GLMM) approaches can be used to estimate capture probabilities and population size for capture-recapture closed population models. An example is used for an illustrative application and for comparison with currently used methodology. A simulation study is also conducted to show the performance of the estimation procedures. Our simulation results show that the proposed quasi-likelihood based on GEE approach provides lower SE than partial likelihood based on either generalized linear models (GLM) or GLMM approaches for estimating population size in a closed capture-recapture experiment. Estimator performance is good if a large proportion of individuals are captured. For cases where only a small proportion of individuals are captured, the estimates become unstable, but the GEE approach outperforms the other methods.John Wiley and Sons Ltd2015-03-30T10:45:55Z2015-03-302014-04-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10174/13755http://hdl.handle.net/10174/13755engAkanda, M.A.S.; Alpizar-Jara, R (2014). Estimation of capture probabilities using generalized estimating equations and mixed effects approaches. Ecology and Evolution, Volume: 4 Issue: 7 Pages: 1158-1165. DOI: 10.1002/ece3.1000http://onlinelibrary.wiley.com/doi/10.1002/ece3.1000/pdfndalpizar@uevora.pt336Akanda, Md. Abdus SalamAlpizar-Jara, Russellinfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-01-03T18:59:41Zoai:dspace.uevora.pt:10174/13755Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T12:05:42.940245Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse |
dc.title.none.fl_str_mv |
Estimation of capture probabilities using generalized estimating equations and mixed effects approaches |
title |
Estimation of capture probabilities using generalized estimating equations and mixed effects approaches |
spellingShingle |
Estimation of capture probabilities using generalized estimating equations and mixed effects approaches Akanda, Md. Abdus Salam Closed population Generalized linear mixed models Generalized linear models Heterogeneity Population size estimation |
title_short |
Estimation of capture probabilities using generalized estimating equations and mixed effects approaches |
title_full |
Estimation of capture probabilities using generalized estimating equations and mixed effects approaches |
title_fullStr |
Estimation of capture probabilities using generalized estimating equations and mixed effects approaches |
title_full_unstemmed |
Estimation of capture probabilities using generalized estimating equations and mixed effects approaches |
title_sort |
Estimation of capture probabilities using generalized estimating equations and mixed effects approaches |
author |
Akanda, Md. Abdus Salam |
author_facet |
Akanda, Md. Abdus Salam Alpizar-Jara, Russell |
author_role |
author |
author2 |
Alpizar-Jara, Russell |
author2_role |
author |
dc.contributor.author.fl_str_mv |
Akanda, Md. Abdus Salam Alpizar-Jara, Russell |
dc.subject.por.fl_str_mv |
Closed population Generalized linear mixed models Generalized linear models Heterogeneity Population size estimation |
topic |
Closed population Generalized linear mixed models Generalized linear models Heterogeneity Population size estimation |
description |
Modeling individual heterogeneity in capture probabilities has been one of the most challenging tasks in capture-recapture studies. Heterogeneity in capture probabilities can be modeled as a function of individual covariates, but correlation structure among capture occasions should be taking into account. A proposed generalized estimating equations (GEE) and generalized linear mixed modeling (GLMM) approaches can be used to estimate capture probabilities and population size for capture-recapture closed population models. An example is used for an illustrative application and for comparison with currently used methodology. A simulation study is also conducted to show the performance of the estimation procedures. Our simulation results show that the proposed quasi-likelihood based on GEE approach provides lower SE than partial likelihood based on either generalized linear models (GLM) or GLMM approaches for estimating population size in a closed capture-recapture experiment. Estimator performance is good if a large proportion of individuals are captured. For cases where only a small proportion of individuals are captured, the estimates become unstable, but the GEE approach outperforms the other methods. |
publishDate |
2014 |
dc.date.none.fl_str_mv |
2014-04-01T00:00:00Z 2015-03-30T10:45:55Z 2015-03-30 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10174/13755 http://hdl.handle.net/10174/13755 |
url |
http://hdl.handle.net/10174/13755 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Akanda, M.A.S.; Alpizar-Jara, R (2014). Estimation of capture probabilities using generalized estimating equations and mixed effects approaches. Ecology and Evolution, Volume: 4 Issue: 7 Pages: 1158-1165. DOI: 10.1002/ece3.1000 http://onlinelibrary.wiley.com/doi/10.1002/ece3.1000/pdf nd alpizar@uevora.pt 336 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
John Wiley and Sons Ltd |
publisher.none.fl_str_mv |
John Wiley and Sons Ltd |
dc.source.none.fl_str_mv |
reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia instacron:RCAAP |
instname_str |
FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
collection |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
repository.name.fl_str_mv |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia |
repository.mail.fl_str_mv |
info@rcaap.pt |
_version_ |
1833592507470970880 |