Multiplicative mixed-effects modelling of dengue incidence: an analysis of the 2019 outbreak in the Dominican Republic
Main Author: | |
---|---|
Publication Date: | 2023 |
Other Authors: | , , , , , |
Format: | Article |
Language: | eng |
Source: | Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
Download full: | http://hdl.handle.net/10773/36547 |
Summary: | Dengue is a vector-borne disease that is endemic to several countries, including the Dominican Republic, which has experienced dengue outbreaks for over four decades. With outbreaks growing in incidence in recent years, it is becoming increasingly important to develop better tools to understand drivers of dengue transmission. Such tools are critical for providing timely information to assist healthcare authorities in preparing human, material, and medical resources for outbreaks. Here, we investigate associations between meteorological variables and dengue transmission in the Dominican Republic in 2019, the year in which the country’s largest outbreak to date ocurred. We apply generalized linear mixed modelling with gamma family and log link to model the weekly dengue incidence rate. Because correlations in lags between climate variables and dengue cases exhibited different behaviour among provinces, a backward-type selection method was executed to find a final model with lags in the explanatory variables. We find that in the best models, meteorological conditions such as temperature and rainfall have an impact with a delay of 2–5 weeks in the development of an outbreak, ensuring breeding conditions for mosquitoes. |
id |
RCAP_c15c759199e8f4843eedafed5af0d19a |
---|---|
oai_identifier_str |
oai:ria.ua.pt:10773/36547 |
network_acronym_str |
RCAP |
network_name_str |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
repository_id_str |
https://opendoar.ac.uk/repository/7160 |
spelling |
Multiplicative mixed-effects modelling of dengue incidence: an analysis of the 2019 outbreak in the Dominican RepublicDengueDominican RepublicClimate variablesLagsGeneralized linear mixed modelsDengue is a vector-borne disease that is endemic to several countries, including the Dominican Republic, which has experienced dengue outbreaks for over four decades. With outbreaks growing in incidence in recent years, it is becoming increasingly important to develop better tools to understand drivers of dengue transmission. Such tools are critical for providing timely information to assist healthcare authorities in preparing human, material, and medical resources for outbreaks. Here, we investigate associations between meteorological variables and dengue transmission in the Dominican Republic in 2019, the year in which the country’s largest outbreak to date ocurred. We apply generalized linear mixed modelling with gamma family and log link to model the weekly dengue incidence rate. Because correlations in lags between climate variables and dengue cases exhibited different behaviour among provinces, a backward-type selection method was executed to find a final model with lags in the explanatory variables. We find that in the best models, meteorological conditions such as temperature and rainfall have an impact with a delay of 2–5 weeks in the development of an outbreak, ensuring breeding conditions for mosquitoes.MDPI2023-03-13T10:04:35Z2023-02-01T00:00:00Z2023-02-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/36547eng10.3390/axioms12020150Freitas, AdelaideRodrigues, Helena SofiaMartins, NatáliaIutis, AdelaRobert, Michael A.Herrera, DemianColomé-Hidalgo, Manuelinfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-05-06T04:43:33Zoai:ria.ua.pt:10773/36547Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T14:18:06.292677Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse |
dc.title.none.fl_str_mv |
Multiplicative mixed-effects modelling of dengue incidence: an analysis of the 2019 outbreak in the Dominican Republic |
title |
Multiplicative mixed-effects modelling of dengue incidence: an analysis of the 2019 outbreak in the Dominican Republic |
spellingShingle |
Multiplicative mixed-effects modelling of dengue incidence: an analysis of the 2019 outbreak in the Dominican Republic Freitas, Adelaide Dengue Dominican Republic Climate variables Lags Generalized linear mixed models |
title_short |
Multiplicative mixed-effects modelling of dengue incidence: an analysis of the 2019 outbreak in the Dominican Republic |
title_full |
Multiplicative mixed-effects modelling of dengue incidence: an analysis of the 2019 outbreak in the Dominican Republic |
title_fullStr |
Multiplicative mixed-effects modelling of dengue incidence: an analysis of the 2019 outbreak in the Dominican Republic |
title_full_unstemmed |
Multiplicative mixed-effects modelling of dengue incidence: an analysis of the 2019 outbreak in the Dominican Republic |
title_sort |
Multiplicative mixed-effects modelling of dengue incidence: an analysis of the 2019 outbreak in the Dominican Republic |
author |
Freitas, Adelaide |
author_facet |
Freitas, Adelaide Rodrigues, Helena Sofia Martins, Natália Iutis, Adela Robert, Michael A. Herrera, Demian Colomé-Hidalgo, Manuel |
author_role |
author |
author2 |
Rodrigues, Helena Sofia Martins, Natália Iutis, Adela Robert, Michael A. Herrera, Demian Colomé-Hidalgo, Manuel |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Freitas, Adelaide Rodrigues, Helena Sofia Martins, Natália Iutis, Adela Robert, Michael A. Herrera, Demian Colomé-Hidalgo, Manuel |
dc.subject.por.fl_str_mv |
Dengue Dominican Republic Climate variables Lags Generalized linear mixed models |
topic |
Dengue Dominican Republic Climate variables Lags Generalized linear mixed models |
description |
Dengue is a vector-borne disease that is endemic to several countries, including the Dominican Republic, which has experienced dengue outbreaks for over four decades. With outbreaks growing in incidence in recent years, it is becoming increasingly important to develop better tools to understand drivers of dengue transmission. Such tools are critical for providing timely information to assist healthcare authorities in preparing human, material, and medical resources for outbreaks. Here, we investigate associations between meteorological variables and dengue transmission in the Dominican Republic in 2019, the year in which the country’s largest outbreak to date ocurred. We apply generalized linear mixed modelling with gamma family and log link to model the weekly dengue incidence rate. Because correlations in lags between climate variables and dengue cases exhibited different behaviour among provinces, a backward-type selection method was executed to find a final model with lags in the explanatory variables. We find that in the best models, meteorological conditions such as temperature and rainfall have an impact with a delay of 2–5 weeks in the development of an outbreak, ensuring breeding conditions for mosquitoes. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-03-13T10:04:35Z 2023-02-01T00:00:00Z 2023-02-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10773/36547 |
url |
http://hdl.handle.net/10773/36547 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.3390/axioms12020150 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
MDPI |
publisher.none.fl_str_mv |
MDPI |
dc.source.none.fl_str_mv |
reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia instacron:RCAAP |
instname_str |
FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
collection |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
repository.name.fl_str_mv |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia |
repository.mail.fl_str_mv |
info@rcaap.pt |
_version_ |
1833594480721133568 |