Imagej's contribution to left ventricular segmentation in myocardial perfusion imaging

Bibliographic Details
Main Author: Sousa, Carlota Leonardo
Publication Date: 2017
Other Authors: Carolino, Elisabete, Figueiredo, Sérgio, Vieira, Lina
Format: Article
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/10400.21/7746
Summary: Introduction: The Myocardial Perfusion Imaging (MPI) is a non-invasive image test that allows the assessment of perfusion, function, and viability of the Left Ventricle (LV). The quantitative parameters obtained post-reconstruction requires an accurate segmentation of the LV. ImageJ is an open-source software that provides segmentation techniques that may contribute to the segmentation of the LV in the MPI. The purpose of this study was to study the influence of the different segmentation methods provided by ImageJ, in MPI, depending on the administered activity. Material and methods: We carried out an experimental research with 4 MPI studies simulated with 275, 385, 500 and 750 Bq/voxel in the myocardium, whose short-axis (SA) slices were segmented with ImageJ by the threshold default, OTSU, and k-means Plugin Toolkit methods (k=2, k=3). To analyze the most appropriate segmentation method, the signal-to-noise ratio (SNR) for each short-axis (SA) slice was calculated, in accordance with the slices obtained from the software Quantitative Perfusion Single Photon Emission Computed Tomography® (QPS®) and by manual segmentation using ImageJ. To analyze the SNR with ImageJ and QPS® segmentation methods in the same simulated study, and to compare with the same segmentation method in different simulated studies, the Friedman and Kruskal-Wallis tests were applied. Results and discussion: The method k-means with k=3 is the most suitable method for the segmentation of the LV, regardless of the administered activity. Conclusion: This study may contribute to the clinical implementation of open-source based segmentation methods of the LV in MPI, according to the activity in the myocardium.
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spelling Imagej's contribution to left ventricular segmentation in myocardial perfusion imagingNuclear medicineImagejMyocardial perfusion imagingSegmentationSignal-to-noise ratioIntroduction: The Myocardial Perfusion Imaging (MPI) is a non-invasive image test that allows the assessment of perfusion, function, and viability of the Left Ventricle (LV). The quantitative parameters obtained post-reconstruction requires an accurate segmentation of the LV. ImageJ is an open-source software that provides segmentation techniques that may contribute to the segmentation of the LV in the MPI. The purpose of this study was to study the influence of the different segmentation methods provided by ImageJ, in MPI, depending on the administered activity. Material and methods: We carried out an experimental research with 4 MPI studies simulated with 275, 385, 500 and 750 Bq/voxel in the myocardium, whose short-axis (SA) slices were segmented with ImageJ by the threshold default, OTSU, and k-means Plugin Toolkit methods (k=2, k=3). To analyze the most appropriate segmentation method, the signal-to-noise ratio (SNR) for each short-axis (SA) slice was calculated, in accordance with the slices obtained from the software Quantitative Perfusion Single Photon Emission Computed Tomography® (QPS®) and by manual segmentation using ImageJ. To analyze the SNR with ImageJ and QPS® segmentation methods in the same simulated study, and to compare with the same segmentation method in different simulated studies, the Friedman and Kruskal-Wallis tests were applied. Results and discussion: The method k-means with k=3 is the most suitable method for the segmentation of the LV, regardless of the administered activity. Conclusion: This study may contribute to the clinical implementation of open-source based segmentation methods of the LV in MPI, according to the activity in the myocardium.OATRCIPLSousa, Carlota LeonardoCarolino, ElisabeteFigueiredo, SérgioVieira, Lina2017-12-20T15:13:57Z2017-062017-06-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.21/7746eng10.15761/NMBI.1000119info:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2025-02-12T10:14:37Zoai:repositorio.ipl.pt:10400.21/7746Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T20:05:08.961930Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Imagej's contribution to left ventricular segmentation in myocardial perfusion imaging
title Imagej's contribution to left ventricular segmentation in myocardial perfusion imaging
spellingShingle Imagej's contribution to left ventricular segmentation in myocardial perfusion imaging
Sousa, Carlota Leonardo
Nuclear medicine
Imagej
Myocardial perfusion imaging
Segmentation
Signal-to-noise ratio
title_short Imagej's contribution to left ventricular segmentation in myocardial perfusion imaging
title_full Imagej's contribution to left ventricular segmentation in myocardial perfusion imaging
title_fullStr Imagej's contribution to left ventricular segmentation in myocardial perfusion imaging
title_full_unstemmed Imagej's contribution to left ventricular segmentation in myocardial perfusion imaging
title_sort Imagej's contribution to left ventricular segmentation in myocardial perfusion imaging
author Sousa, Carlota Leonardo
author_facet Sousa, Carlota Leonardo
Carolino, Elisabete
Figueiredo, Sérgio
Vieira, Lina
author_role author
author2 Carolino, Elisabete
Figueiredo, Sérgio
Vieira, Lina
author2_role author
author
author
dc.contributor.none.fl_str_mv RCIPL
dc.contributor.author.fl_str_mv Sousa, Carlota Leonardo
Carolino, Elisabete
Figueiredo, Sérgio
Vieira, Lina
dc.subject.por.fl_str_mv Nuclear medicine
Imagej
Myocardial perfusion imaging
Segmentation
Signal-to-noise ratio
topic Nuclear medicine
Imagej
Myocardial perfusion imaging
Segmentation
Signal-to-noise ratio
description Introduction: The Myocardial Perfusion Imaging (MPI) is a non-invasive image test that allows the assessment of perfusion, function, and viability of the Left Ventricle (LV). The quantitative parameters obtained post-reconstruction requires an accurate segmentation of the LV. ImageJ is an open-source software that provides segmentation techniques that may contribute to the segmentation of the LV in the MPI. The purpose of this study was to study the influence of the different segmentation methods provided by ImageJ, in MPI, depending on the administered activity. Material and methods: We carried out an experimental research with 4 MPI studies simulated with 275, 385, 500 and 750 Bq/voxel in the myocardium, whose short-axis (SA) slices were segmented with ImageJ by the threshold default, OTSU, and k-means Plugin Toolkit methods (k=2, k=3). To analyze the most appropriate segmentation method, the signal-to-noise ratio (SNR) for each short-axis (SA) slice was calculated, in accordance with the slices obtained from the software Quantitative Perfusion Single Photon Emission Computed Tomography® (QPS®) and by manual segmentation using ImageJ. To analyze the SNR with ImageJ and QPS® segmentation methods in the same simulated study, and to compare with the same segmentation method in different simulated studies, the Friedman and Kruskal-Wallis tests were applied. Results and discussion: The method k-means with k=3 is the most suitable method for the segmentation of the LV, regardless of the administered activity. Conclusion: This study may contribute to the clinical implementation of open-source based segmentation methods of the LV in MPI, according to the activity in the myocardium.
publishDate 2017
dc.date.none.fl_str_mv 2017-12-20T15:13:57Z
2017-06
2017-06-01T00:00:00Z
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