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Early mortality prediction in intensive care unit patients based on serum metabolomic

Bibliographic Details
Main Author: Araújo, Rúben
Publication Date: 2024
Other Authors: Ramalhete, Luís, Von Rekowski, Cristiana, Fonseca, Tiago AH, Bento, Luís, Calado, Cecília
Format: Article
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/10400.21/18120
Summary: Predicting mortality in intensive care units (ICUs) is essential for timely interventions and efficient resource use, especially during pandemics like COVID-19, where high mortality persisted even after the state of emergency ended. Current mortality prediction methods remain limited, especially for critically ill ICU patients, due to their dynamic metabolic changes and heterogeneous pathophysiological processes. This study evaluated how the serum metabolomic fingerprint, acquired through Fourier-Transform Infrared (FTIR) spectroscopy, could support mortality prediction models in COVID-19 ICU patients. A preliminary univariate analysis of serum FTIR spectra revealed significant spectral differences between 21 discharged and 23 deceased patients; however, the most significant spectral bands did not yield high-performing predictive models. By applying a Fast Correlation-Based Filter (FCBF) for feature selection of the spectra, a set of spectral bands spanning a broader range of molecular functional groups was identified, which enabled Naïve Bayes models with AUCs of 0.79, 0.97, and 0.98 for the first 48 h of ICU admission, seven days prior, and the day of the outcome, respectively, which are, in turn, defined as either death or discharge from the ICU. These findings suggest FTIR spectroscopy as a rapid, economical, and minimally invasive diagnostic tool, but further validation is needed in larger, more diverse cohorts.
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spelling Early mortality prediction in intensive care unit patients based on serum metabolomicICU mortality predictionserum biomarkersFTIR spectroscopyomicsPredicting mortality in intensive care units (ICUs) is essential for timely interventions and efficient resource use, especially during pandemics like COVID-19, where high mortality persisted even after the state of emergency ended. Current mortality prediction methods remain limited, especially for critically ill ICU patients, due to their dynamic metabolic changes and heterogeneous pathophysiological processes. This study evaluated how the serum metabolomic fingerprint, acquired through Fourier-Transform Infrared (FTIR) spectroscopy, could support mortality prediction models in COVID-19 ICU patients. A preliminary univariate analysis of serum FTIR spectra revealed significant spectral differences between 21 discharged and 23 deceased patients; however, the most significant spectral bands did not yield high-performing predictive models. By applying a Fast Correlation-Based Filter (FCBF) for feature selection of the spectra, a set of spectral bands spanning a broader range of molecular functional groups was identified, which enabled Naïve Bayes models with AUCs of 0.79, 0.97, and 0.98 for the first 48 h of ICU admission, seven days prior, and the day of the outcome, respectively, which are, in turn, defined as either death or discharge from the ICU. These findings suggest FTIR spectroscopy as a rapid, economical, and minimally invasive diagnostic tool, but further validation is needed in larger, more diverse cohorts.MDPIRCIPLAraújo, RúbenRamalhete, LuísVon Rekowski, CristianaFonseca, Tiago AHBento, LuísCalado, Cecília2025-01-07T08:15:50Z2024-12-192024-12-19T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.21/18120eng1661-659610.3390/ijms252413609info:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2025-02-12T10:04:20Zoai:repositorio.ipl.pt:10400.21/18120Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T20:04:06.233588Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Early mortality prediction in intensive care unit patients based on serum metabolomic
title Early mortality prediction in intensive care unit patients based on serum metabolomic
spellingShingle Early mortality prediction in intensive care unit patients based on serum metabolomic
Araújo, Rúben
ICU mortality prediction
serum biomarkers
FTIR spectroscopy
omics
title_short Early mortality prediction in intensive care unit patients based on serum metabolomic
title_full Early mortality prediction in intensive care unit patients based on serum metabolomic
title_fullStr Early mortality prediction in intensive care unit patients based on serum metabolomic
title_full_unstemmed Early mortality prediction in intensive care unit patients based on serum metabolomic
title_sort Early mortality prediction in intensive care unit patients based on serum metabolomic
author Araújo, Rúben
author_facet Araújo, Rúben
Ramalhete, Luís
Von Rekowski, Cristiana
Fonseca, Tiago AH
Bento, Luís
Calado, Cecília
author_role author
author2 Ramalhete, Luís
Von Rekowski, Cristiana
Fonseca, Tiago AH
Bento, Luís
Calado, Cecília
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv RCIPL
dc.contributor.author.fl_str_mv Araújo, Rúben
Ramalhete, Luís
Von Rekowski, Cristiana
Fonseca, Tiago AH
Bento, Luís
Calado, Cecília
dc.subject.por.fl_str_mv ICU mortality prediction
serum biomarkers
FTIR spectroscopy
omics
topic ICU mortality prediction
serum biomarkers
FTIR spectroscopy
omics
description Predicting mortality in intensive care units (ICUs) is essential for timely interventions and efficient resource use, especially during pandemics like COVID-19, where high mortality persisted even after the state of emergency ended. Current mortality prediction methods remain limited, especially for critically ill ICU patients, due to their dynamic metabolic changes and heterogeneous pathophysiological processes. This study evaluated how the serum metabolomic fingerprint, acquired through Fourier-Transform Infrared (FTIR) spectroscopy, could support mortality prediction models in COVID-19 ICU patients. A preliminary univariate analysis of serum FTIR spectra revealed significant spectral differences between 21 discharged and 23 deceased patients; however, the most significant spectral bands did not yield high-performing predictive models. By applying a Fast Correlation-Based Filter (FCBF) for feature selection of the spectra, a set of spectral bands spanning a broader range of molecular functional groups was identified, which enabled Naïve Bayes models with AUCs of 0.79, 0.97, and 0.98 for the first 48 h of ICU admission, seven days prior, and the day of the outcome, respectively, which are, in turn, defined as either death or discharge from the ICU. These findings suggest FTIR spectroscopy as a rapid, economical, and minimally invasive diagnostic tool, but further validation is needed in larger, more diverse cohorts.
publishDate 2024
dc.date.none.fl_str_mv 2024-12-19
2024-12-19T00:00:00Z
2025-01-07T08:15:50Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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format article
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.21/18120
url http://hdl.handle.net/10400.21/18120
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1661-6596
10.3390/ijms252413609
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