A de novo paradigm for male infertility
| Autor(a) principal: | |
|---|---|
| Data de Publicação: | 2022 |
| Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
| Tipo de documento: | Artigo |
| Idioma: | eng |
| Título da fonte: | Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
| Texto Completo: | http://hdl.handle.net/10400.18/8497 |
Resumo: | De novo mutations are known to play a prominent role in sporadic disorders with reduced fitness. We hypothesize that de novo mutations play an important role in severe male infertility and explain a portion of the genetic causes of this understudied disorder. To test this hypothesis, we utilize trio-based exome sequencing in a cohort of 185 infertile males and their unaffected parents. Following a systematic analysis, 29 of 145 rare (MAF < 0.1%) protein-altering de novo mutations are classified as possibly causative of the male infertility phenotype. We observed a significant enrichment of loss-of-function de novo mutations in loss-of-function-intolerant genes (p-value = 1.00 × 10−5) in infertile men compared to controls. Additionally, we detected a significant increase in predicted pathogenic de novo missense mutations affecting missense-intolerant genes (p-value = 5.01 × 10−4) in contrast to predicted benign de novo mutations. One gene we identify, RBM5, is an essential regulator of male germ cell pre-mRNA splicing and has been previously implicated in male infertility in mice. In a follow-up study, 6 rare pathogenic missense mutations affecting this gene are observed in a cohort of 2,506 infertile patients, whilst we find no such mutations in a cohort of 5,784 fertile men (p-value = 0.03). Our results provide evidence for the role of de novo mutations in severe male infertility and point to new candidate genes affecting fertility. |
| id |
RCAP_f130dcddb7e78b5767c9ee297dba540b |
|---|---|
| oai_identifier_str |
oai:repositorio.insa.pt:10400.18/8497 |
| network_acronym_str |
RCAP |
| network_name_str |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
| repository_id_str |
https://opendoar.ac.uk/repository/7160 |
| spelling |
A de novo paradigm for male infertilityMale InfertilityInfertile ManSpermatogenesisGenética HumanaDoenças GenéticasDe novo mutations are known to play a prominent role in sporadic disorders with reduced fitness. We hypothesize that de novo mutations play an important role in severe male infertility and explain a portion of the genetic causes of this understudied disorder. To test this hypothesis, we utilize trio-based exome sequencing in a cohort of 185 infertile males and their unaffected parents. Following a systematic analysis, 29 of 145 rare (MAF < 0.1%) protein-altering de novo mutations are classified as possibly causative of the male infertility phenotype. We observed a significant enrichment of loss-of-function de novo mutations in loss-of-function-intolerant genes (p-value = 1.00 × 10−5) in infertile men compared to controls. Additionally, we detected a significant increase in predicted pathogenic de novo missense mutations affecting missense-intolerant genes (p-value = 5.01 × 10−4) in contrast to predicted benign de novo mutations. One gene we identify, RBM5, is an essential regulator of male germ cell pre-mRNA splicing and has been previously implicated in male infertility in mice. In a follow-up study, 6 rare pathogenic missense mutations affecting this gene are observed in a cohort of 2,506 infertile patients, whilst we find no such mutations in a cohort of 5,784 fertile men (p-value = 0.03). Our results provide evidence for the role of de novo mutations in severe male infertility and point to new candidate genes affecting fertility.Nature ResearchRepositório Científico do Instituto Nacional de SaúdeOud, M.S.Smits, R.M.Smith, H.E.Mastrorosa, F.K.Holt, G.S.Houston, B.J.de Vries, P.F.Alobaidi, B.K.S.Batty, L.E.Ismail, H.Greenwood, J.Sheth, H.Mikulasova, A.Astuti, G.D.N.Gilissen, C.McEleny, K.Turner, H.Coxhead, J.Cockell, S.Braat, D.D.M.Fleischer, K.D’Hauwers, K.W.M.Schaafsma, E.Conrad, Donald F.Nagirnaja, LiinaAston, Kenneth I.Carrell, Douglas T.Hotaling, James M.Jenkins, Timothy G.McLachlan, RobO’Bryan, Moira K.Schlegel, Peter N.Eisenberg, Michael L.Sandlow, Jay I.Jungheim, Emily S.Omurtag, Kenan R.Lopes, Alexandra M.Seixas, SusanaCarvalho, FilipaFernandes, SusanaBarros, AlbertoGonçalves, JoãoCaetano, IrisPinto, GraçaCorreia, SóniaLaan, MarisPunab, MargusMeyts, Ewa Rajpert-DeJørgensen, NielsAlmstrup, KristianKrausz, Csilla G.Jarvi, Keith A.Nagirnaja, L.Conrad, D.F.Friedrich, C.Kliesch, S.Aston, K.I.Riera-Escamilla, A.Krausz, C.Gonzaga-Jauregui, C.Santibanez-Koref, M.Elliott, D. J.Vissers, L.E.L.M.Tüttelmann, F.O’Bryan, M.K.Ramos, L.Xavier, M.J.van der Heijden, G.W.Veltman, J.A.2023-02-02T14:37:21Z2022-01-102022-01-10T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/8497eng2041-172310.1038/s41467-021-27132-8info:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2025-02-26T14:16:16Zoai:repositorio.insa.pt:10400.18/8497Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T21:30:24.427957Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse |
| dc.title.none.fl_str_mv |
A de novo paradigm for male infertility |
| title |
A de novo paradigm for male infertility |
| spellingShingle |
A de novo paradigm for male infertility Oud, M.S. Male Infertility Infertile Man Spermatogenesis Genética Humana Doenças Genéticas |
| title_short |
A de novo paradigm for male infertility |
| title_full |
A de novo paradigm for male infertility |
| title_fullStr |
A de novo paradigm for male infertility |
| title_full_unstemmed |
A de novo paradigm for male infertility |
| title_sort |
A de novo paradigm for male infertility |
| author |
Oud, M.S. |
| author_facet |
Oud, M.S. Smits, R.M. Smith, H.E. Mastrorosa, F.K. Holt, G.S. Houston, B.J. de Vries, P.F. Alobaidi, B.K.S. Batty, L.E. Ismail, H. Greenwood, J. Sheth, H. Mikulasova, A. Astuti, G.D.N. Gilissen, C. McEleny, K. Turner, H. Coxhead, J. Cockell, S. Braat, D.D.M. Fleischer, K. D’Hauwers, K.W.M. Schaafsma, E. Conrad, Donald F. Nagirnaja, Liina Aston, Kenneth I. Carrell, Douglas T. Hotaling, James M. Jenkins, Timothy G. McLachlan, Rob O’Bryan, Moira K. Schlegel, Peter N. Eisenberg, Michael L. Sandlow, Jay I. Jungheim, Emily S. Omurtag, Kenan R. Lopes, Alexandra M. Seixas, Susana Carvalho, Filipa Fernandes, Susana Barros, Alberto Gonçalves, João Caetano, Iris Pinto, Graça Correia, Sónia Laan, Maris Punab, Margus Meyts, Ewa Rajpert-De Jørgensen, Niels Almstrup, Kristian Krausz, Csilla G. Jarvi, Keith A. Nagirnaja, L. Conrad, D.F. Friedrich, C. Kliesch, S. Aston, K.I. Riera-Escamilla, A. Krausz, C. Gonzaga-Jauregui, C. Santibanez-Koref, M. Elliott, D. J. Vissers, L.E.L.M. Tüttelmann, F. O’Bryan, M.K. Ramos, L. Xavier, M.J. van der Heijden, G.W. Veltman, J.A. |
| author_role |
author |
| author2 |
Smits, R.M. Smith, H.E. Mastrorosa, F.K. Holt, G.S. Houston, B.J. de Vries, P.F. Alobaidi, B.K.S. Batty, L.E. Ismail, H. Greenwood, J. Sheth, H. Mikulasova, A. Astuti, G.D.N. Gilissen, C. McEleny, K. Turner, H. Coxhead, J. Cockell, S. Braat, D.D.M. Fleischer, K. D’Hauwers, K.W.M. Schaafsma, E. Conrad, Donald F. Nagirnaja, Liina Aston, Kenneth I. Carrell, Douglas T. Hotaling, James M. Jenkins, Timothy G. McLachlan, Rob O’Bryan, Moira K. Schlegel, Peter N. Eisenberg, Michael L. Sandlow, Jay I. Jungheim, Emily S. Omurtag, Kenan R. Lopes, Alexandra M. Seixas, Susana Carvalho, Filipa Fernandes, Susana Barros, Alberto Gonçalves, João Caetano, Iris Pinto, Graça Correia, Sónia Laan, Maris Punab, Margus Meyts, Ewa Rajpert-De Jørgensen, Niels Almstrup, Kristian Krausz, Csilla G. Jarvi, Keith A. Nagirnaja, L. Conrad, D.F. Friedrich, C. Kliesch, S. Aston, K.I. Riera-Escamilla, A. Krausz, C. Gonzaga-Jauregui, C. Santibanez-Koref, M. Elliott, D. J. Vissers, L.E.L.M. Tüttelmann, F. O’Bryan, M.K. Ramos, L. Xavier, M.J. van der Heijden, G.W. Veltman, J.A. |
| author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
| dc.contributor.none.fl_str_mv |
Repositório Científico do Instituto Nacional de Saúde |
| dc.contributor.author.fl_str_mv |
Oud, M.S. Smits, R.M. Smith, H.E. Mastrorosa, F.K. Holt, G.S. Houston, B.J. de Vries, P.F. Alobaidi, B.K.S. Batty, L.E. Ismail, H. Greenwood, J. Sheth, H. Mikulasova, A. Astuti, G.D.N. Gilissen, C. McEleny, K. Turner, H. Coxhead, J. Cockell, S. Braat, D.D.M. Fleischer, K. D’Hauwers, K.W.M. Schaafsma, E. Conrad, Donald F. Nagirnaja, Liina Aston, Kenneth I. Carrell, Douglas T. Hotaling, James M. Jenkins, Timothy G. McLachlan, Rob O’Bryan, Moira K. Schlegel, Peter N. Eisenberg, Michael L. Sandlow, Jay I. Jungheim, Emily S. Omurtag, Kenan R. Lopes, Alexandra M. Seixas, Susana Carvalho, Filipa Fernandes, Susana Barros, Alberto Gonçalves, João Caetano, Iris Pinto, Graça Correia, Sónia Laan, Maris Punab, Margus Meyts, Ewa Rajpert-De Jørgensen, Niels Almstrup, Kristian Krausz, Csilla G. Jarvi, Keith A. Nagirnaja, L. Conrad, D.F. Friedrich, C. Kliesch, S. Aston, K.I. Riera-Escamilla, A. Krausz, C. Gonzaga-Jauregui, C. Santibanez-Koref, M. Elliott, D. J. Vissers, L.E.L.M. Tüttelmann, F. O’Bryan, M.K. Ramos, L. Xavier, M.J. van der Heijden, G.W. Veltman, J.A. |
| dc.subject.por.fl_str_mv |
Male Infertility Infertile Man Spermatogenesis Genética Humana Doenças Genéticas |
| topic |
Male Infertility Infertile Man Spermatogenesis Genética Humana Doenças Genéticas |
| description |
De novo mutations are known to play a prominent role in sporadic disorders with reduced fitness. We hypothesize that de novo mutations play an important role in severe male infertility and explain a portion of the genetic causes of this understudied disorder. To test this hypothesis, we utilize trio-based exome sequencing in a cohort of 185 infertile males and their unaffected parents. Following a systematic analysis, 29 of 145 rare (MAF < 0.1%) protein-altering de novo mutations are classified as possibly causative of the male infertility phenotype. We observed a significant enrichment of loss-of-function de novo mutations in loss-of-function-intolerant genes (p-value = 1.00 × 10−5) in infertile men compared to controls. Additionally, we detected a significant increase in predicted pathogenic de novo missense mutations affecting missense-intolerant genes (p-value = 5.01 × 10−4) in contrast to predicted benign de novo mutations. One gene we identify, RBM5, is an essential regulator of male germ cell pre-mRNA splicing and has been previously implicated in male infertility in mice. In a follow-up study, 6 rare pathogenic missense mutations affecting this gene are observed in a cohort of 2,506 infertile patients, whilst we find no such mutations in a cohort of 5,784 fertile men (p-value = 0.03). Our results provide evidence for the role of de novo mutations in severe male infertility and point to new candidate genes affecting fertility. |
| publishDate |
2022 |
| dc.date.none.fl_str_mv |
2022-01-10 2022-01-10T00:00:00Z 2023-02-02T14:37:21Z |
| dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
| format |
article |
| status_str |
publishedVersion |
| dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.18/8497 |
| url |
http://hdl.handle.net/10400.18/8497 |
| dc.language.iso.fl_str_mv |
eng |
| language |
eng |
| dc.relation.none.fl_str_mv |
2041-1723 10.1038/s41467-021-27132-8 |
| dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
| eu_rights_str_mv |
openAccess |
| dc.format.none.fl_str_mv |
application/pdf |
| dc.publisher.none.fl_str_mv |
Nature Research |
| publisher.none.fl_str_mv |
Nature Research |
| dc.source.none.fl_str_mv |
reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia instacron:RCAAP |
| instname_str |
FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia |
| instacron_str |
RCAAP |
| institution |
RCAAP |
| reponame_str |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
| collection |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
| repository.name.fl_str_mv |
Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia |
| repository.mail.fl_str_mv |
info@rcaap.pt |
| _version_ |
1833599305419587584 |