A mixed computational modelling and experimental approach to the interaction between gold nanoparticles and blood proteins

Bibliographic Details
Main Author: Giza, Marta Serra
Publication Date: 2016
Format: Master thesis
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/10362/23125
Summary: Upon arrival at the bloodstream, injected gold nanoparticles are covered with circulating plasma proteins, creating what is called a plasma corona. Its protein content is determined by the proteins’ affinity constants to the exposed surface of the nanoparticle. This work aims to propose an interaction mechanism between three plasma proteins and CALNN-functionalized nanoparticles via computational simulation and complementary experimental approach. Denaturing polyacrylamide gel electrophoresis determined the protein content of two human plasma samples, and helped in the characterization of the three most abundant blood proteins used in this study. Estimation of their electrostatic potential surfaces, silhouette areas, and diameters allowed the evaluation of the theoretical number of proteins forming a fully-covered nanoparticle. Seventeen transferrin molecules and eighteen albumin molecules with a side-on adsorption orientation were predicted to represent a monolayer adsorbome in a 20 nm gold nanoparticle. The dynamics of albumin adsorption to nanoparticles was studied through incubation-time assays on agarose gel electrophoresis, resulting in a stable protein corona starting from 7 h incubation time. The concentration ratio forming protein corona at the surface of nanoparticles was analysed through agarose gels electrophoretic mobility assays, revealing the formation of a full protein corona when a plateau in bionanoconjugates migration is achieved, resulting in protein coronas of [HSA]:[AuNP-CALNN] of 200:1 and 600:1 for [BPF]:[AuNP-CALNN] concentration ratios. Zeta-potential values were derived by relating agarose percentage with electrophoretic mobility of albumin bionanoconjugates, resulting in lower potential values for bionanoconjugates due to surface charge shielding of nanoparticles. Obtained ζ-potential values ranged from -26.05 up to -20.36 mV, forming colloid stable bionanoconjugates. Hydrodynamic radii of bionanoconjugates of albumin supported the formation of a monolayered and two-layered protein corona with increasing albumin:nanoparticle concentration ratios. Transferrin and fibrinogen showed increasing hydrodynamic radii with increasing protein:nanoparticle concentration ratios; in which fibrinogen bionanoconjugates showed fibrinogen wrapping around the nanoparticle. Electrostatic potential surfaces and protein-ligand docking using nanoparticle’s capping agent CALNN was performed in order to predict possible adsorption sites of human albumin and transferrin.
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spelling A mixed computational modelling and experimental approach to the interaction between gold nanoparticles and blood proteinsGold nanoparticlesProtein coronaPlasma proteinsElectrophoresisDynamic light scatteringBioinformaticsDomínio/Área Científica::Engenharia e Tecnologia::Engenharia QuímicaUpon arrival at the bloodstream, injected gold nanoparticles are covered with circulating plasma proteins, creating what is called a plasma corona. Its protein content is determined by the proteins’ affinity constants to the exposed surface of the nanoparticle. This work aims to propose an interaction mechanism between three plasma proteins and CALNN-functionalized nanoparticles via computational simulation and complementary experimental approach. Denaturing polyacrylamide gel electrophoresis determined the protein content of two human plasma samples, and helped in the characterization of the three most abundant blood proteins used in this study. Estimation of their electrostatic potential surfaces, silhouette areas, and diameters allowed the evaluation of the theoretical number of proteins forming a fully-covered nanoparticle. Seventeen transferrin molecules and eighteen albumin molecules with a side-on adsorption orientation were predicted to represent a monolayer adsorbome in a 20 nm gold nanoparticle. The dynamics of albumin adsorption to nanoparticles was studied through incubation-time assays on agarose gel electrophoresis, resulting in a stable protein corona starting from 7 h incubation time. The concentration ratio forming protein corona at the surface of nanoparticles was analysed through agarose gels electrophoretic mobility assays, revealing the formation of a full protein corona when a plateau in bionanoconjugates migration is achieved, resulting in protein coronas of [HSA]:[AuNP-CALNN] of 200:1 and 600:1 for [BPF]:[AuNP-CALNN] concentration ratios. Zeta-potential values were derived by relating agarose percentage with electrophoretic mobility of albumin bionanoconjugates, resulting in lower potential values for bionanoconjugates due to surface charge shielding of nanoparticles. Obtained ζ-potential values ranged from -26.05 up to -20.36 mV, forming colloid stable bionanoconjugates. Hydrodynamic radii of bionanoconjugates of albumin supported the formation of a monolayered and two-layered protein corona with increasing albumin:nanoparticle concentration ratios. Transferrin and fibrinogen showed increasing hydrodynamic radii with increasing protein:nanoparticle concentration ratios; in which fibrinogen bionanoconjugates showed fibrinogen wrapping around the nanoparticle. Electrostatic potential surfaces and protein-ligand docking using nanoparticle’s capping agent CALNN was performed in order to predict possible adsorption sites of human albumin and transferrin.Tavares, JoséKrippahl, LudwigRUNGiza, Marta Serra2017-09-08T10:47:31Z201620172016-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10362/23125enginfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-05-22T17:27:33Zoai:run.unl.pt:10362/23125Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T16:58:54.858636Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv A mixed computational modelling and experimental approach to the interaction between gold nanoparticles and blood proteins
title A mixed computational modelling and experimental approach to the interaction between gold nanoparticles and blood proteins
spellingShingle A mixed computational modelling and experimental approach to the interaction between gold nanoparticles and blood proteins
Giza, Marta Serra
Gold nanoparticles
Protein corona
Plasma proteins
Electrophoresis
Dynamic light scattering
Bioinformatics
Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química
title_short A mixed computational modelling and experimental approach to the interaction between gold nanoparticles and blood proteins
title_full A mixed computational modelling and experimental approach to the interaction between gold nanoparticles and blood proteins
title_fullStr A mixed computational modelling and experimental approach to the interaction between gold nanoparticles and blood proteins
title_full_unstemmed A mixed computational modelling and experimental approach to the interaction between gold nanoparticles and blood proteins
title_sort A mixed computational modelling and experimental approach to the interaction between gold nanoparticles and blood proteins
author Giza, Marta Serra
author_facet Giza, Marta Serra
author_role author
dc.contributor.none.fl_str_mv Tavares, José
Krippahl, Ludwig
RUN
dc.contributor.author.fl_str_mv Giza, Marta Serra
dc.subject.por.fl_str_mv Gold nanoparticles
Protein corona
Plasma proteins
Electrophoresis
Dynamic light scattering
Bioinformatics
Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química
topic Gold nanoparticles
Protein corona
Plasma proteins
Electrophoresis
Dynamic light scattering
Bioinformatics
Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Química
description Upon arrival at the bloodstream, injected gold nanoparticles are covered with circulating plasma proteins, creating what is called a plasma corona. Its protein content is determined by the proteins’ affinity constants to the exposed surface of the nanoparticle. This work aims to propose an interaction mechanism between three plasma proteins and CALNN-functionalized nanoparticles via computational simulation and complementary experimental approach. Denaturing polyacrylamide gel electrophoresis determined the protein content of two human plasma samples, and helped in the characterization of the three most abundant blood proteins used in this study. Estimation of their electrostatic potential surfaces, silhouette areas, and diameters allowed the evaluation of the theoretical number of proteins forming a fully-covered nanoparticle. Seventeen transferrin molecules and eighteen albumin molecules with a side-on adsorption orientation were predicted to represent a monolayer adsorbome in a 20 nm gold nanoparticle. The dynamics of albumin adsorption to nanoparticles was studied through incubation-time assays on agarose gel electrophoresis, resulting in a stable protein corona starting from 7 h incubation time. The concentration ratio forming protein corona at the surface of nanoparticles was analysed through agarose gels electrophoretic mobility assays, revealing the formation of a full protein corona when a plateau in bionanoconjugates migration is achieved, resulting in protein coronas of [HSA]:[AuNP-CALNN] of 200:1 and 600:1 for [BPF]:[AuNP-CALNN] concentration ratios. Zeta-potential values were derived by relating agarose percentage with electrophoretic mobility of albumin bionanoconjugates, resulting in lower potential values for bionanoconjugates due to surface charge shielding of nanoparticles. Obtained ζ-potential values ranged from -26.05 up to -20.36 mV, forming colloid stable bionanoconjugates. Hydrodynamic radii of bionanoconjugates of albumin supported the formation of a monolayered and two-layered protein corona with increasing albumin:nanoparticle concentration ratios. Transferrin and fibrinogen showed increasing hydrodynamic radii with increasing protein:nanoparticle concentration ratios; in which fibrinogen bionanoconjugates showed fibrinogen wrapping around the nanoparticle. Electrostatic potential surfaces and protein-ligand docking using nanoparticle’s capping agent CALNN was performed in order to predict possible adsorption sites of human albumin and transferrin.
publishDate 2016
dc.date.none.fl_str_mv 2016
2016-01-01T00:00:00Z
2017-09-08T10:47:31Z
2017
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10362/23125
url http://hdl.handle.net/10362/23125
dc.language.iso.fl_str_mv eng
language eng
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dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron:RCAAP
instname_str FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron_str RCAAP
institution RCAAP
reponame_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
collection Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository.name.fl_str_mv Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
repository.mail.fl_str_mv info@rcaap.pt
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