H3K9 methylation patterns during somatic embryogenic competence expression in tamarillo (Solanum betaceum Cav.)

Detalhes bibliográficos
Autor(a) principal: Cordeiro, Daniela Correia
Data de Publicação: 2023
Outros Autores: Pérez-Pérez, Yolanda, Canhoto, Jorge, Testillano, Pilar S., Correia, Sandra
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Texto Completo: https://hdl.handle.net/10316/111885
https://doi.org/10.1016/j.scienta.2023.112259
Resumo: The capacity to regenerate is intrinsic to plants and is the basis of natural asexual propagation and artificial cloning. Despite there are different ways of plant regeneration, they all require a change in cell fate and pluripotency reacquisition, in particular somatic embryogenesis. The mechanisms underlying somatic cell reprogramming for embryogenic competence acquisition, expression and maintenance remain not fully understood. These complex processes have been often associated with epigenetic markers, mainly DNA methylation, while little is known about the possible role of histone modifications. In the present study, the dynamics of global levels and distribution patterns of histone H3 methylation at lysine 9 (H3K9), a major repressive histone modification, were analyzed in somatic embryogenesis-induced cell lines with different embryogenic capacities and during somatic embryo initiation, in the woody species Solanum betaceum. Quantification of global H3K9 methylation showed similar levels in the three types of proliferating calli (embryogenic, long-term and non-embryogenic), kept in high sucrose and auxin-containing medium. Microscopic analyzes revealed heterogeneous cell organization and different cell types, particularly evident in embryogenic callus. The H3K9 dimethylation (H3K9me2) immunofluorescence signal was lower in nuclei of cells showing embryogenic-like and proliferating features, while labeling was higher in vacuolated, non-embryogenic cells with higher proliferation rates. By auxin removal, somatic embryo development was promoted in the embryogenic cell line. During the initiation of this process, increasing levels of global H3K9 methylation were found, together with increasing H3K9me2 immunofluorescence signals, especially in cells of the developing embryo. These results suggest that H3K9 methylation is involved in somatic embryo development, a developmental pathway in which this epigenetic mark could play a role in the gene transcription variation that is associated with embryogenic competence expression in S. betaceum. Altogether, these data provide new insights into the role of this epigenetic mark in somatic embryogenesis in trees, where scarce information is available.
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spelling H3K9 methylation patterns during somatic embryogenic competence expression in tamarillo (Solanum betaceum Cav.)Cell reprogrammingEpigeneticsH3K9me2ImmunofluorescenceSomatic embryogenesisTotipotencyWoody speciesThe capacity to regenerate is intrinsic to plants and is the basis of natural asexual propagation and artificial cloning. Despite there are different ways of plant regeneration, they all require a change in cell fate and pluripotency reacquisition, in particular somatic embryogenesis. The mechanisms underlying somatic cell reprogramming for embryogenic competence acquisition, expression and maintenance remain not fully understood. These complex processes have been often associated with epigenetic markers, mainly DNA methylation, while little is known about the possible role of histone modifications. In the present study, the dynamics of global levels and distribution patterns of histone H3 methylation at lysine 9 (H3K9), a major repressive histone modification, were analyzed in somatic embryogenesis-induced cell lines with different embryogenic capacities and during somatic embryo initiation, in the woody species Solanum betaceum. Quantification of global H3K9 methylation showed similar levels in the three types of proliferating calli (embryogenic, long-term and non-embryogenic), kept in high sucrose and auxin-containing medium. Microscopic analyzes revealed heterogeneous cell organization and different cell types, particularly evident in embryogenic callus. The H3K9 dimethylation (H3K9me2) immunofluorescence signal was lower in nuclei of cells showing embryogenic-like and proliferating features, while labeling was higher in vacuolated, non-embryogenic cells with higher proliferation rates. By auxin removal, somatic embryo development was promoted in the embryogenic cell line. During the initiation of this process, increasing levels of global H3K9 methylation were found, together with increasing H3K9me2 immunofluorescence signals, especially in cells of the developing embryo. These results suggest that H3K9 methylation is involved in somatic embryo development, a developmental pathway in which this epigenetic mark could play a role in the gene transcription variation that is associated with embryogenic competence expression in S. betaceum. Altogether, these data provide new insights into the role of this epigenetic mark in somatic embryogenesis in trees, where scarce information is available.This manuscript is based upon work from COST Action COPYTREE CA21157, supported by COST (European Cooperation in Science and Technology). PID2020-113018RB-I00; MCIN/AEI/10.13039/501100011033; TED2021-129633BI00; CPP2021-008750Elsevier2023info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttps://hdl.handle.net/10316/111885https://hdl.handle.net/10316/111885https://doi.org/10.1016/j.scienta.2023.112259eng03044238Cordeiro, Daniela CorreiaPérez-Pérez, YolandaCanhoto, JorgeTestillano, Pilar S.Correia, Sandrainfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-07-19T14:12:53Zoai:estudogeral.uc.pt:10316/111885Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-29T06:04:13.684790Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv H3K9 methylation patterns during somatic embryogenic competence expression in tamarillo (Solanum betaceum Cav.)
title H3K9 methylation patterns during somatic embryogenic competence expression in tamarillo (Solanum betaceum Cav.)
spellingShingle H3K9 methylation patterns during somatic embryogenic competence expression in tamarillo (Solanum betaceum Cav.)
Cordeiro, Daniela Correia
Cell reprogramming
Epigenetics
H3K9me2
Immunofluorescence
Somatic embryogenesis
Totipotency
Woody species
title_short H3K9 methylation patterns during somatic embryogenic competence expression in tamarillo (Solanum betaceum Cav.)
title_full H3K9 methylation patterns during somatic embryogenic competence expression in tamarillo (Solanum betaceum Cav.)
title_fullStr H3K9 methylation patterns during somatic embryogenic competence expression in tamarillo (Solanum betaceum Cav.)
title_full_unstemmed H3K9 methylation patterns during somatic embryogenic competence expression in tamarillo (Solanum betaceum Cav.)
title_sort H3K9 methylation patterns during somatic embryogenic competence expression in tamarillo (Solanum betaceum Cav.)
author Cordeiro, Daniela Correia
author_facet Cordeiro, Daniela Correia
Pérez-Pérez, Yolanda
Canhoto, Jorge
Testillano, Pilar S.
Correia, Sandra
author_role author
author2 Pérez-Pérez, Yolanda
Canhoto, Jorge
Testillano, Pilar S.
Correia, Sandra
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Cordeiro, Daniela Correia
Pérez-Pérez, Yolanda
Canhoto, Jorge
Testillano, Pilar S.
Correia, Sandra
dc.subject.por.fl_str_mv Cell reprogramming
Epigenetics
H3K9me2
Immunofluorescence
Somatic embryogenesis
Totipotency
Woody species
topic Cell reprogramming
Epigenetics
H3K9me2
Immunofluorescence
Somatic embryogenesis
Totipotency
Woody species
description The capacity to regenerate is intrinsic to plants and is the basis of natural asexual propagation and artificial cloning. Despite there are different ways of plant regeneration, they all require a change in cell fate and pluripotency reacquisition, in particular somatic embryogenesis. The mechanisms underlying somatic cell reprogramming for embryogenic competence acquisition, expression and maintenance remain not fully understood. These complex processes have been often associated with epigenetic markers, mainly DNA methylation, while little is known about the possible role of histone modifications. In the present study, the dynamics of global levels and distribution patterns of histone H3 methylation at lysine 9 (H3K9), a major repressive histone modification, were analyzed in somatic embryogenesis-induced cell lines with different embryogenic capacities and during somatic embryo initiation, in the woody species Solanum betaceum. Quantification of global H3K9 methylation showed similar levels in the three types of proliferating calli (embryogenic, long-term and non-embryogenic), kept in high sucrose and auxin-containing medium. Microscopic analyzes revealed heterogeneous cell organization and different cell types, particularly evident in embryogenic callus. The H3K9 dimethylation (H3K9me2) immunofluorescence signal was lower in nuclei of cells showing embryogenic-like and proliferating features, while labeling was higher in vacuolated, non-embryogenic cells with higher proliferation rates. By auxin removal, somatic embryo development was promoted in the embryogenic cell line. During the initiation of this process, increasing levels of global H3K9 methylation were found, together with increasing H3K9me2 immunofluorescence signals, especially in cells of the developing embryo. These results suggest that H3K9 methylation is involved in somatic embryo development, a developmental pathway in which this epigenetic mark could play a role in the gene transcription variation that is associated with embryogenic competence expression in S. betaceum. Altogether, these data provide new insights into the role of this epigenetic mark in somatic embryogenesis in trees, where scarce information is available.
publishDate 2023
dc.date.none.fl_str_mv 2023
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dc.identifier.uri.fl_str_mv https://hdl.handle.net/10316/111885
https://hdl.handle.net/10316/111885
https://doi.org/10.1016/j.scienta.2023.112259
url https://hdl.handle.net/10316/111885
https://doi.org/10.1016/j.scienta.2023.112259
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 03044238
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dc.publisher.none.fl_str_mv Elsevier
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