Concatenator: sequence data matrices handling made easy

Bibliographic Details
Main Author: Pina-Martins, Francisco
Publication Date: 2008
Other Authors: Paulo, Octávio S.
Format: Article
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/10451/43993
Summary: Concatenator is a simple and user-friendly software that implements two very useful functions for phylogenetics data analysis. It concatenates NEXUS files of several fragments in a single NEXUS file ready to be used in phylogenetics software, such as paup and mrbayes and it converts FASTA sequence data files to NEXUS and vice-versa. Additionally, concatenated files can be prepared for partition tests in paup. It is freely available in http://cobig2.fc.ul.pt.
id RCAP_c119d75f768ccd1db3b6fbb99148719e
oai_identifier_str oai:repositorio.ulisboa.pt:10451/43993
network_acronym_str RCAP
network_name_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository_id_str https://opendoar.ac.uk/repository/7160
spelling Concatenator: sequence data matrices handling made easySequence dataconcatenationNexusFASTAsoftwareperlConcatenator is a simple and user-friendly software that implements two very useful functions for phylogenetics data analysis. It concatenates NEXUS files of several fragments in a single NEXUS file ready to be used in phylogenetics software, such as paup and mrbayes and it converts FASTA sequence data files to NEXUS and vice-versa. Additionally, concatenated files can be prepared for partition tests in paup. It is freely available in http://cobig2.fc.ul.pt.John Wiley & Sons, Inc.Repositório da Universidade de LisboaPina-Martins, FranciscoPaulo, Octávio S.2020-07-14T11:26:08Z20082008-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10451/43993engPina-Martins, F., & Paulo, O. S. (2008). Concatenator: Sequence data matrices handling made easy. Molecular Ecology Resources, 8(6), 1254–1255. doi: 10.1111/j.1755-0998.2008.02164.x10.1111/j.1755-0998.2008.02164.xinfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2025-03-17T14:21:53Zoai:repositorio.ulisboa.pt:10451/43993Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-29T03:09:40.813217Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Concatenator: sequence data matrices handling made easy
title Concatenator: sequence data matrices handling made easy
spellingShingle Concatenator: sequence data matrices handling made easy
Pina-Martins, Francisco
Sequence data
concatenation
Nexus
FASTA
software
perl
title_short Concatenator: sequence data matrices handling made easy
title_full Concatenator: sequence data matrices handling made easy
title_fullStr Concatenator: sequence data matrices handling made easy
title_full_unstemmed Concatenator: sequence data matrices handling made easy
title_sort Concatenator: sequence data matrices handling made easy
author Pina-Martins, Francisco
author_facet Pina-Martins, Francisco
Paulo, Octávio S.
author_role author
author2 Paulo, Octávio S.
author2_role author
dc.contributor.none.fl_str_mv Repositório da Universidade de Lisboa
dc.contributor.author.fl_str_mv Pina-Martins, Francisco
Paulo, Octávio S.
dc.subject.por.fl_str_mv Sequence data
concatenation
Nexus
FASTA
software
perl
topic Sequence data
concatenation
Nexus
FASTA
software
perl
description Concatenator is a simple and user-friendly software that implements two very useful functions for phylogenetics data analysis. It concatenates NEXUS files of several fragments in a single NEXUS file ready to be used in phylogenetics software, such as paup and mrbayes and it converts FASTA sequence data files to NEXUS and vice-versa. Additionally, concatenated files can be prepared for partition tests in paup. It is freely available in http://cobig2.fc.ul.pt.
publishDate 2008
dc.date.none.fl_str_mv 2008
2008-01-01T00:00:00Z
2020-07-14T11:26:08Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10451/43993
url http://hdl.handle.net/10451/43993
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Pina-Martins, F., & Paulo, O. S. (2008). Concatenator: Sequence data matrices handling made easy. Molecular Ecology Resources, 8(6), 1254–1255. doi: 10.1111/j.1755-0998.2008.02164.x
10.1111/j.1755-0998.2008.02164.x
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv John Wiley & Sons, Inc.
publisher.none.fl_str_mv John Wiley & Sons, Inc.
dc.source.none.fl_str_mv reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron:RCAAP
instname_str FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron_str RCAAP
institution RCAAP
reponame_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
collection Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository.name.fl_str_mv Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
repository.mail.fl_str_mv info@rcaap.pt
_version_ 1833601615941074944

Similar Items