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BIRC3 alterations in chronic and B-cell acute lymphocytic leukemia patients

Detalhes bibliográficos
Autor(a) principal: Alhourani, Eyad
Data de Publicação: 2016
Outros Autores: Othman, Moneeb A. K., Melo, Joana Barbosa, Carreira, Isabel M., Grygalewicz, Beata, Vujić, Dragana, Zecević, Zeljko, Joksić, Gordana, Glaser, Anita, Pohle, Beate, Schlie, Cordula, Hauke, Sven, Liehr, Thomas
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Texto Completo: https://hdl.handle.net/10316/108731
https://doi.org/10.3892/ol.2016.4388
Resumo: Deletions within chromosome 11q22-23, are considered among the most common chromosomal aberrations in chronic lymphocytic leukemia (CLL), and are associated with a poor outcome. In addition to the ataxia telangiectasia mutated (ATM) gene, the baculoviral IAP repeat-containing 3 (BIRC3) gene is also located in the region. BIRC3 encodes a negative regulator of the non-canonical nuclear factor κ-light-chain-enhancer of activated B cells (NF-κB) protein. Disruption of BIRC3 is known to be restricted to CLL fludarabine-refractory patients. The aim of the present study was to determine the frequency of copy number changes of BIRC3 and to assess its association with two known predictors of negative CLL outcome, ATM and tumor protein 53 (TP53) gene deletions. To evaluate the specificity of BIRC3 alterations to CLL, BIRC3 copy numbers were assessed in 117 CLL patients in addition to 45 B-cell acute lymphocytic leukemia (B-ALL) patients. A commercially available multiplex ligation dependent probe amplification kit, which includes four probes for the detection of TP53 and four probes for ATM gene region, was applied. Interphase-directed fluorescence in situ hybridization was used to apply commercially available probes for BIRC3, ATM and TP53. High resolution array-comparative genomic hybridization was conducted in selected cases. Genetic abnormalities of BIRC3 were detected in 23/117 (~20%) of CLL and 2/45 (~4%) of B-ALL cases. Overall, 20 patients with CLL and 1 with B-ALL possessed a BIRC3 deletion, whilst 3 patients with CLL and 1 with B-ALL harbored a BIRC3 duplication. All patients with an ATM deletion also carried a BIRC3 deletion. Only 2 CLL cases possessed deletions in BIRC3, ATM and TP53 simultaneously. Evidently, the deletion or duplication of BIRC3 may be observed rarely in B-ALL patients. BIRC3 duplication may occur in CLL patients, for which the prognosis requires additional studies in the future. The likelihood that TP53 deletions occur simultaneously with BIRC3 and/or ATM aberrations is low. However, as ATM deletions may, but not always, associate with BIRC3 deletions, each region should be considered in the future diagnostics of CLL in order to aid treatment decisions, notably whether to treat with or without fludarabine.
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spelling BIRC3 alterations in chronic and B-cell acute lymphocytic leukemia patientschronic lymphocytic leukemiaB‑cell acute lymphocytic leukemiabaculoviral IAP repeat‑containing 3 genecopy number alterationsdeletionduplicationhyperdiploidyDeletions within chromosome 11q22-23, are considered among the most common chromosomal aberrations in chronic lymphocytic leukemia (CLL), and are associated with a poor outcome. In addition to the ataxia telangiectasia mutated (ATM) gene, the baculoviral IAP repeat-containing 3 (BIRC3) gene is also located in the region. BIRC3 encodes a negative regulator of the non-canonical nuclear factor κ-light-chain-enhancer of activated B cells (NF-κB) protein. Disruption of BIRC3 is known to be restricted to CLL fludarabine-refractory patients. The aim of the present study was to determine the frequency of copy number changes of BIRC3 and to assess its association with two known predictors of negative CLL outcome, ATM and tumor protein 53 (TP53) gene deletions. To evaluate the specificity of BIRC3 alterations to CLL, BIRC3 copy numbers were assessed in 117 CLL patients in addition to 45 B-cell acute lymphocytic leukemia (B-ALL) patients. A commercially available multiplex ligation dependent probe amplification kit, which includes four probes for the detection of TP53 and four probes for ATM gene region, was applied. Interphase-directed fluorescence in situ hybridization was used to apply commercially available probes for BIRC3, ATM and TP53. High resolution array-comparative genomic hybridization was conducted in selected cases. Genetic abnormalities of BIRC3 were detected in 23/117 (~20%) of CLL and 2/45 (~4%) of B-ALL cases. Overall, 20 patients with CLL and 1 with B-ALL possessed a BIRC3 deletion, whilst 3 patients with CLL and 1 with B-ALL harbored a BIRC3 duplication. All patients with an ATM deletion also carried a BIRC3 deletion. Only 2 CLL cases possessed deletions in BIRC3, ATM and TP53 simultaneously. Evidently, the deletion or duplication of BIRC3 may be observed rarely in B-ALL patients. BIRC3 duplication may occur in CLL patients, for which the prognosis requires additional studies in the future. The likelihood that TP53 deletions occur simultaneously with BIRC3 and/or ATM aberrations is low. However, as ATM deletions may, but not always, associate with BIRC3 deletions, each region should be considered in the future diagnostics of CLL in order to aid treatment decisions, notably whether to treat with or without fludarabine.Spandidos Publications2016-05info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttps://hdl.handle.net/10316/108731https://hdl.handle.net/10316/108731https://doi.org/10.3892/ol.2016.4388eng1792-1074Alhourani, EyadOthman, Moneeb A. K.Melo, Joana BarbosaCarreira, Isabel M.Grygalewicz, BeataVujić, DraganaZecević, ZeljkoJoksić, GordanaGlaser, AnitaPohle, BeateSchlie, CordulaHauke, SvenLiehr, Thomasinfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2023-09-11T10:16:33Zoai:estudogeral.uc.pt:10316/108731Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-29T06:00:05.861586Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv BIRC3 alterations in chronic and B-cell acute lymphocytic leukemia patients
title BIRC3 alterations in chronic and B-cell acute lymphocytic leukemia patients
spellingShingle BIRC3 alterations in chronic and B-cell acute lymphocytic leukemia patients
Alhourani, Eyad
chronic lymphocytic leukemia
B‑cell acute lymphocytic leukemia
baculoviral IAP repeat‑containing 3 gene
copy number alterations
deletion
duplication
hyperdiploidy
title_short BIRC3 alterations in chronic and B-cell acute lymphocytic leukemia patients
title_full BIRC3 alterations in chronic and B-cell acute lymphocytic leukemia patients
title_fullStr BIRC3 alterations in chronic and B-cell acute lymphocytic leukemia patients
title_full_unstemmed BIRC3 alterations in chronic and B-cell acute lymphocytic leukemia patients
title_sort BIRC3 alterations in chronic and B-cell acute lymphocytic leukemia patients
author Alhourani, Eyad
author_facet Alhourani, Eyad
Othman, Moneeb A. K.
Melo, Joana Barbosa
Carreira, Isabel M.
Grygalewicz, Beata
Vujić, Dragana
Zecević, Zeljko
Joksić, Gordana
Glaser, Anita
Pohle, Beate
Schlie, Cordula
Hauke, Sven
Liehr, Thomas
author_role author
author2 Othman, Moneeb A. K.
Melo, Joana Barbosa
Carreira, Isabel M.
Grygalewicz, Beata
Vujić, Dragana
Zecević, Zeljko
Joksić, Gordana
Glaser, Anita
Pohle, Beate
Schlie, Cordula
Hauke, Sven
Liehr, Thomas
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Alhourani, Eyad
Othman, Moneeb A. K.
Melo, Joana Barbosa
Carreira, Isabel M.
Grygalewicz, Beata
Vujić, Dragana
Zecević, Zeljko
Joksić, Gordana
Glaser, Anita
Pohle, Beate
Schlie, Cordula
Hauke, Sven
Liehr, Thomas
dc.subject.por.fl_str_mv chronic lymphocytic leukemia
B‑cell acute lymphocytic leukemia
baculoviral IAP repeat‑containing 3 gene
copy number alterations
deletion
duplication
hyperdiploidy
topic chronic lymphocytic leukemia
B‑cell acute lymphocytic leukemia
baculoviral IAP repeat‑containing 3 gene
copy number alterations
deletion
duplication
hyperdiploidy
description Deletions within chromosome 11q22-23, are considered among the most common chromosomal aberrations in chronic lymphocytic leukemia (CLL), and are associated with a poor outcome. In addition to the ataxia telangiectasia mutated (ATM) gene, the baculoviral IAP repeat-containing 3 (BIRC3) gene is also located in the region. BIRC3 encodes a negative regulator of the non-canonical nuclear factor κ-light-chain-enhancer of activated B cells (NF-κB) protein. Disruption of BIRC3 is known to be restricted to CLL fludarabine-refractory patients. The aim of the present study was to determine the frequency of copy number changes of BIRC3 and to assess its association with two known predictors of negative CLL outcome, ATM and tumor protein 53 (TP53) gene deletions. To evaluate the specificity of BIRC3 alterations to CLL, BIRC3 copy numbers were assessed in 117 CLL patients in addition to 45 B-cell acute lymphocytic leukemia (B-ALL) patients. A commercially available multiplex ligation dependent probe amplification kit, which includes four probes for the detection of TP53 and four probes for ATM gene region, was applied. Interphase-directed fluorescence in situ hybridization was used to apply commercially available probes for BIRC3, ATM and TP53. High resolution array-comparative genomic hybridization was conducted in selected cases. Genetic abnormalities of BIRC3 were detected in 23/117 (~20%) of CLL and 2/45 (~4%) of B-ALL cases. Overall, 20 patients with CLL and 1 with B-ALL possessed a BIRC3 deletion, whilst 3 patients with CLL and 1 with B-ALL harbored a BIRC3 duplication. All patients with an ATM deletion also carried a BIRC3 deletion. Only 2 CLL cases possessed deletions in BIRC3, ATM and TP53 simultaneously. Evidently, the deletion or duplication of BIRC3 may be observed rarely in B-ALL patients. BIRC3 duplication may occur in CLL patients, for which the prognosis requires additional studies in the future. The likelihood that TP53 deletions occur simultaneously with BIRC3 and/or ATM aberrations is low. However, as ATM deletions may, but not always, associate with BIRC3 deletions, each region should be considered in the future diagnostics of CLL in order to aid treatment decisions, notably whether to treat with or without fludarabine.
publishDate 2016
dc.date.none.fl_str_mv 2016-05
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/10316/108731
https://hdl.handle.net/10316/108731
https://doi.org/10.3892/ol.2016.4388
url https://hdl.handle.net/10316/108731
https://doi.org/10.3892/ol.2016.4388
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1792-1074
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Spandidos Publications
publisher.none.fl_str_mv Spandidos Publications
dc.source.none.fl_str_mv reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron:RCAAP
instname_str FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron_str RCAAP
institution RCAAP
reponame_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
collection Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository.name.fl_str_mv Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
repository.mail.fl_str_mv info@rcaap.pt
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