Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil

Bibliographic Details
Main Author: Faria, Mariana
Publication Date: 2024
Other Authors: Andrade, Rubia, Leite, Karina, Bonfim, Rafaele, Valênça, Ana, Ramos, Antônio, Berra, Thais, Arcêncio, Ricardo, Netto, Antônio Ruffino, Gomes, Dulce, Bollela, Valdes, Monroe, Aline
Format: Article
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/10174/37262
https://doi.org/Faria MGBFd, Andrade RLdP, Leite KFdS, Bonfim RO, Valênc¸a ABM, Ramos ACV, et al. (2024) Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil. PLoS ONE 19(6): e0305063. https://doi.org/10.1371/journal. pone.0305063
https://doi.org/10.1371/journal. pone.0305063
Summary: Tuberculosis (TB) in people living with HIV (PLHIV) is usually paucibacillary and the smear microscopy has limitations and may lead to high proportions of non-confirmed pulmonary tuberculosis (NC-PTB). Despite culture being the reference method, it usually takes 6 to 8 weeks to produce the results. This study aimed to analyze the effect of a rapid molecular test (Xpert) in the confirmatory rate of PTB among PLHIV, from 2010 to 2020, in São Paulo state, Brazil. This is an ecological study with time series analysis of the trend and the NCPTB rates before and after Xpert implementation in 21 municipalities. The use of Xpert started and gradually increased after 2014, while the rate of NC-PTB in PLHIV decreased over this time, being more significant between late 2015 and mid-2017. The city of Ribeirão Preto stands out for having the highest percentage (75.0%) of Xpert testing among PLHIV and for showing two reductions in the NC-PTB rate. The cities with low Xpert coverage had a slower and smaller decrease in the NC-PTB rate. Despite being available since 2014, a significant proportion of PLHIV suspected of PTB in the state of São Paulo did not have an Xpert ordered by the doctors. The implementation of Xpert reduced the NC-PTB rates with growing effect as the coverage increased in the municipality.
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spelling Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, BrazilHIVTuberculosisXpert MTBTime SeriesStructural BreaksTuberculosis (TB) in people living with HIV (PLHIV) is usually paucibacillary and the smear microscopy has limitations and may lead to high proportions of non-confirmed pulmonary tuberculosis (NC-PTB). Despite culture being the reference method, it usually takes 6 to 8 weeks to produce the results. This study aimed to analyze the effect of a rapid molecular test (Xpert) in the confirmatory rate of PTB among PLHIV, from 2010 to 2020, in São Paulo state, Brazil. This is an ecological study with time series analysis of the trend and the NCPTB rates before and after Xpert implementation in 21 municipalities. The use of Xpert started and gradually increased after 2014, while the rate of NC-PTB in PLHIV decreased over this time, being more significant between late 2015 and mid-2017. The city of Ribeirão Preto stands out for having the highest percentage (75.0%) of Xpert testing among PLHIV and for showing two reductions in the NC-PTB rate. The cities with low Xpert coverage had a slower and smaller decrease in the NC-PTB rate. Despite being available since 2014, a significant proportion of PLHIV suspected of PTB in the state of São Paulo did not have an Xpert ordered by the doctors. The implementation of Xpert reduced the NC-PTB rates with growing effect as the coverage increased in the municipality.PLoS ONE2024-09-06T14:17:39Z2024-09-062024-06-07T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10174/37262https://doi.org/Faria MGBFd, Andrade RLdP, Leite KFdS, Bonfim RO, Valênc¸a ABM, Ramos ACV, et al. (2024) Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil. PLoS ONE 19(6): e0305063. https://doi.org/10.1371/journal. pone.0305063http://hdl.handle.net/10174/37262https://doi.org/10.1371/journal. pone.0305063enghttps://journals.plos.org/plosone/article?id=10.1371/journal.pone.0305063rimagod@usp.brndndndndndndricardo@eerp.usp.braruffino@fmrp.usp.brdmog@uevora.ptndamonroe@eerp.usp.br572Faria, MarianaAndrade, RubiaLeite, KarinaBonfim, RafaeleValênça, AnaRamos, AntônioBerra, ThaisArcêncio, RicardoNetto, Antônio RuffinoGomes, DulceBollela, ValdesMonroe, Alineinfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-09-10T01:47:40Zoai:dspace.uevora.pt:10174/37262Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T18:49:18.739987Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil
title Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil
spellingShingle Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil
Faria, Mariana
HIV
Tuberculosis
Xpert MTB
Time Series
Structural Breaks
title_short Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil
title_full Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil
title_fullStr Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil
title_full_unstemmed Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil
title_sort Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil
author Faria, Mariana
author_facet Faria, Mariana
Andrade, Rubia
Leite, Karina
Bonfim, Rafaele
Valênça, Ana
Ramos, Antônio
Berra, Thais
Arcêncio, Ricardo
Netto, Antônio Ruffino
Gomes, Dulce
Bollela, Valdes
Monroe, Aline
author_role author
author2 Andrade, Rubia
Leite, Karina
Bonfim, Rafaele
Valênça, Ana
Ramos, Antônio
Berra, Thais
Arcêncio, Ricardo
Netto, Antônio Ruffino
Gomes, Dulce
Bollela, Valdes
Monroe, Aline
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Faria, Mariana
Andrade, Rubia
Leite, Karina
Bonfim, Rafaele
Valênça, Ana
Ramos, Antônio
Berra, Thais
Arcêncio, Ricardo
Netto, Antônio Ruffino
Gomes, Dulce
Bollela, Valdes
Monroe, Aline
dc.subject.por.fl_str_mv HIV
Tuberculosis
Xpert MTB
Time Series
Structural Breaks
topic HIV
Tuberculosis
Xpert MTB
Time Series
Structural Breaks
description Tuberculosis (TB) in people living with HIV (PLHIV) is usually paucibacillary and the smear microscopy has limitations and may lead to high proportions of non-confirmed pulmonary tuberculosis (NC-PTB). Despite culture being the reference method, it usually takes 6 to 8 weeks to produce the results. This study aimed to analyze the effect of a rapid molecular test (Xpert) in the confirmatory rate of PTB among PLHIV, from 2010 to 2020, in São Paulo state, Brazil. This is an ecological study with time series analysis of the trend and the NCPTB rates before and after Xpert implementation in 21 municipalities. The use of Xpert started and gradually increased after 2014, while the rate of NC-PTB in PLHIV decreased over this time, being more significant between late 2015 and mid-2017. The city of Ribeirão Preto stands out for having the highest percentage (75.0%) of Xpert testing among PLHIV and for showing two reductions in the NC-PTB rate. The cities with low Xpert coverage had a slower and smaller decrease in the NC-PTB rate. Despite being available since 2014, a significant proportion of PLHIV suspected of PTB in the state of São Paulo did not have an Xpert ordered by the doctors. The implementation of Xpert reduced the NC-PTB rates with growing effect as the coverage increased in the municipality.
publishDate 2024
dc.date.none.fl_str_mv 2024-09-06T14:17:39Z
2024-09-06
2024-06-07T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10174/37262
https://doi.org/Faria MGBFd, Andrade RLdP, Leite KFdS, Bonfim RO, Valênc¸a ABM, Ramos ACV, et al. (2024) Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil. PLoS ONE 19(6): e0305063. https://doi.org/10.1371/journal. pone.0305063
http://hdl.handle.net/10174/37262
https://doi.org/10.1371/journal. pone.0305063
url http://hdl.handle.net/10174/37262
https://doi.org/Faria MGBFd, Andrade RLdP, Leite KFdS, Bonfim RO, Valênc¸a ABM, Ramos ACV, et al. (2024) Operational indicators for pulmonary tuberculosis diagnosis in people living with HIV before and after Xpert MTB/RIF implementation in the state of São Paulo, Brazil. PLoS ONE 19(6): e0305063. https://doi.org/10.1371/journal. pone.0305063
https://doi.org/10.1371/journal. pone.0305063
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0305063
rimagod@usp.br
nd
nd
nd
nd
nd
nd
ricardo@eerp.usp.br
aruffino@fmrp.usp.br
dmog@uevora.pt
nd
amonroe@eerp.usp.br
572
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv PLoS ONE
publisher.none.fl_str_mv PLoS ONE
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