The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study
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Publication Date: | 2021 |
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Format: | Article |
Language: | eng |
Source: | Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
Download full: | http://hdl.handle.net/10773/30351 |
Summary: | MXenes are a recently discovered class of two-dimensional materials, which have been attracting much interest by virtue of their promising biomedical and electronic applications. Here, we report on the results of first-principles calculations, based on density functional theory (DFT) including dispersion, of the adsorption energies and configurations of the five nucleobases, molecules conforming nucleotides in nucleic acids, such as DNA and RNA, on the oxygen-terminated titanium carbide MXene surface (Ti2CO2), chosen as a prototype MXene due to titanium being the most biocompatible transition metal. We find that physisorption is the most likely mechanism of adsorption on the Ti2CO2 (0001) basal surface, with the molecules sitting parallel to the MXene, about 2.5 Å away. The calculated adsorption energies and Bader charge transfer values are moderate, as desired for sensing applications. We find a fair correlation between the adsorption energies and the van der Waals volumes of the nucleobases, hinting towards an adsorption dominated by van der Waals interactions. No structural deformation is observed on the molecules or on the surface. Thus, all of our conclusions support the potential applicability of the Ti2CO2 MXene as a suitable nucleobase sensor. |
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The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study2D materialsAdsorptionNucleobasesBiosensorsDensity Functional TheoryTitanium Carbide MXeneMXenes are a recently discovered class of two-dimensional materials, which have been attracting much interest by virtue of their promising biomedical and electronic applications. Here, we report on the results of first-principles calculations, based on density functional theory (DFT) including dispersion, of the adsorption energies and configurations of the five nucleobases, molecules conforming nucleotides in nucleic acids, such as DNA and RNA, on the oxygen-terminated titanium carbide MXene surface (Ti2CO2), chosen as a prototype MXene due to titanium being the most biocompatible transition metal. We find that physisorption is the most likely mechanism of adsorption on the Ti2CO2 (0001) basal surface, with the molecules sitting parallel to the MXene, about 2.5 Å away. The calculated adsorption energies and Bader charge transfer values are moderate, as desired for sensing applications. We find a fair correlation between the adsorption energies and the van der Waals volumes of the nucleobases, hinting towards an adsorption dominated by van der Waals interactions. No structural deformation is observed on the molecules or on the surface. Thus, all of our conclusions support the potential applicability of the Ti2CO2 MXene as a suitable nucleobase sensor.Elsevier2023-04-01T00:00:00Z2021-04-01T00:00:00Z2021-04-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/30351eng0169-433210.1016/j.apsusc.2021.148946Gouveia, José D.Novell-Leruth, GerardViñes, FrancescIllas, FrancescGomes, José R. B.info:eu-repo/semantics/embargoedAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-05-06T04:29:44Zoai:ria.ua.pt:10773/30351Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T14:10:23.242906Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse |
dc.title.none.fl_str_mv |
The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study |
title |
The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study |
spellingShingle |
The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study Gouveia, José D. 2D materials Adsorption Nucleobases Biosensors Density Functional Theory Titanium Carbide MXene |
title_short |
The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study |
title_full |
The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study |
title_fullStr |
The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study |
title_full_unstemmed |
The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study |
title_sort |
The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study |
author |
Gouveia, José D. |
author_facet |
Gouveia, José D. Novell-Leruth, Gerard Viñes, Francesc Illas, Francesc Gomes, José R. B. |
author_role |
author |
author2 |
Novell-Leruth, Gerard Viñes, Francesc Illas, Francesc Gomes, José R. B. |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Gouveia, José D. Novell-Leruth, Gerard Viñes, Francesc Illas, Francesc Gomes, José R. B. |
dc.subject.por.fl_str_mv |
2D materials Adsorption Nucleobases Biosensors Density Functional Theory Titanium Carbide MXene |
topic |
2D materials Adsorption Nucleobases Biosensors Density Functional Theory Titanium Carbide MXene |
description |
MXenes are a recently discovered class of two-dimensional materials, which have been attracting much interest by virtue of their promising biomedical and electronic applications. Here, we report on the results of first-principles calculations, based on density functional theory (DFT) including dispersion, of the adsorption energies and configurations of the five nucleobases, molecules conforming nucleotides in nucleic acids, such as DNA and RNA, on the oxygen-terminated titanium carbide MXene surface (Ti2CO2), chosen as a prototype MXene due to titanium being the most biocompatible transition metal. We find that physisorption is the most likely mechanism of adsorption on the Ti2CO2 (0001) basal surface, with the molecules sitting parallel to the MXene, about 2.5 Å away. The calculated adsorption energies and Bader charge transfer values are moderate, as desired for sensing applications. We find a fair correlation between the adsorption energies and the van der Waals volumes of the nucleobases, hinting towards an adsorption dominated by van der Waals interactions. No structural deformation is observed on the molecules or on the surface. Thus, all of our conclusions support the potential applicability of the Ti2CO2 MXene as a suitable nucleobase sensor. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-04-01T00:00:00Z 2021-04-01 2023-04-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
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article |
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http://hdl.handle.net/10773/30351 |
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eng |
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0169-4332 10.1016/j.apsusc.2021.148946 |
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Elsevier |
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Elsevier |
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