The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study

Bibliographic Details
Main Author: Gouveia, José D.
Publication Date: 2021
Other Authors: Novell-Leruth, Gerard, Viñes, Francesc, Illas, Francesc, Gomes, José R. B.
Format: Article
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/10773/30351
Summary: MXenes are a recently discovered class of two-dimensional materials, which have been attracting much interest by virtue of their promising biomedical and electronic applications. Here, we report on the results of first-principles calculations, based on density functional theory (DFT) including dispersion, of the adsorption energies and configurations of the five nucleobases, molecules conforming nucleotides in nucleic acids, such as DNA and RNA, on the oxygen-terminated titanium carbide MXene surface (Ti2CO2), chosen as a prototype MXene due to titanium being the most biocompatible transition metal. We find that physisorption is the most likely mechanism of adsorption on the Ti2CO2 (0001) basal surface, with the molecules sitting parallel to the MXene, about 2.5 Å away. The calculated adsorption energies and Bader charge transfer values are moderate, as desired for sensing applications. We find a fair correlation between the adsorption energies and the van der Waals volumes of the nucleobases, hinting towards an adsorption dominated by van der Waals interactions. No structural deformation is observed on the molecules or on the surface. Thus, all of our conclusions support the potential applicability of the Ti2CO2 MXene as a suitable nucleobase sensor.
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spelling The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study2D materialsAdsorptionNucleobasesBiosensorsDensity Functional TheoryTitanium Carbide MXeneMXenes are a recently discovered class of two-dimensional materials, which have been attracting much interest by virtue of their promising biomedical and electronic applications. Here, we report on the results of first-principles calculations, based on density functional theory (DFT) including dispersion, of the adsorption energies and configurations of the five nucleobases, molecules conforming nucleotides in nucleic acids, such as DNA and RNA, on the oxygen-terminated titanium carbide MXene surface (Ti2CO2), chosen as a prototype MXene due to titanium being the most biocompatible transition metal. We find that physisorption is the most likely mechanism of adsorption on the Ti2CO2 (0001) basal surface, with the molecules sitting parallel to the MXene, about 2.5 Å away. The calculated adsorption energies and Bader charge transfer values are moderate, as desired for sensing applications. We find a fair correlation between the adsorption energies and the van der Waals volumes of the nucleobases, hinting towards an adsorption dominated by van der Waals interactions. No structural deformation is observed on the molecules or on the surface. Thus, all of our conclusions support the potential applicability of the Ti2CO2 MXene as a suitable nucleobase sensor.Elsevier2023-04-01T00:00:00Z2021-04-01T00:00:00Z2021-04-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/30351eng0169-433210.1016/j.apsusc.2021.148946Gouveia, José D.Novell-Leruth, GerardViñes, FrancescIllas, FrancescGomes, José R. B.info:eu-repo/semantics/embargoedAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-05-06T04:29:44Zoai:ria.ua.pt:10773/30351Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T14:10:23.242906Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study
title The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study
spellingShingle The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study
Gouveia, José D.
2D materials
Adsorption
Nucleobases
Biosensors
Density Functional Theory
Titanium Carbide MXene
title_short The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study
title_full The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study
title_fullStr The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study
title_full_unstemmed The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study
title_sort The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study
author Gouveia, José D.
author_facet Gouveia, José D.
Novell-Leruth, Gerard
Viñes, Francesc
Illas, Francesc
Gomes, José R. B.
author_role author
author2 Novell-Leruth, Gerard
Viñes, Francesc
Illas, Francesc
Gomes, José R. B.
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Gouveia, José D.
Novell-Leruth, Gerard
Viñes, Francesc
Illas, Francesc
Gomes, José R. B.
dc.subject.por.fl_str_mv 2D materials
Adsorption
Nucleobases
Biosensors
Density Functional Theory
Titanium Carbide MXene
topic 2D materials
Adsorption
Nucleobases
Biosensors
Density Functional Theory
Titanium Carbide MXene
description MXenes are a recently discovered class of two-dimensional materials, which have been attracting much interest by virtue of their promising biomedical and electronic applications. Here, we report on the results of first-principles calculations, based on density functional theory (DFT) including dispersion, of the adsorption energies and configurations of the five nucleobases, molecules conforming nucleotides in nucleic acids, such as DNA and RNA, on the oxygen-terminated titanium carbide MXene surface (Ti2CO2), chosen as a prototype MXene due to titanium being the most biocompatible transition metal. We find that physisorption is the most likely mechanism of adsorption on the Ti2CO2 (0001) basal surface, with the molecules sitting parallel to the MXene, about 2.5 Å away. The calculated adsorption energies and Bader charge transfer values are moderate, as desired for sensing applications. We find a fair correlation between the adsorption energies and the van der Waals volumes of the nucleobases, hinting towards an adsorption dominated by van der Waals interactions. No structural deformation is observed on the molecules or on the surface. Thus, all of our conclusions support the potential applicability of the Ti2CO2 MXene as a suitable nucleobase sensor.
publishDate 2021
dc.date.none.fl_str_mv 2021-04-01T00:00:00Z
2021-04-01
2023-04-01T00:00:00Z
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dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10773/30351
url http://hdl.handle.net/10773/30351
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0169-4332
10.1016/j.apsusc.2021.148946
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