Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coli

Bibliographic Details
Main Author: Rodrigues, Joana Lúcia Lima Correia
Publication Date: 2012
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/1822/32993
Summary: Curcuminoids are produced by plants and due to their potential as novel cancer-fighting drugs they have recently attracted increased attention. Nevertheless, they have a poor bioavailability. Cellular uptake is low, and they are quickly metabolized once inside the cell, requiring repetitive oral doses to achieve sufficient concentration inside the cell for therapeutic activity. The goal of this PhD project is to engineer a synthetic pathway for curcuminoid in a model bacterium and trigger its release concurrent with ultrasound treatment. The proposed tasks involve several design and engineering steps to program Escherichia coli to execute the new synthetic pathway triggered by a temperature increase. The heat shock response machinery of E. coli will be used as a sensor in the design of the model bacterium. Afterwards, the gene sequences of the enzymes that catalyze each reaction in the curcuminoid pathway will be synthesized and introduced in the E. coli genome applying several cloning strategies. Data from several well documented experiments on E. coli in relevant conditions that have been published were analyzed to select the most expressed heat shock genes in E. coli with the strongest heat shock promoters. The ibpA, dnaK and fxsA gene promoters were chosen based on their induction rates and expression and were validated by RT-qPCR and subsequently through the construction of a stress probe using an adequate reporter gene.
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spelling Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coliCurcuminoids are produced by plants and due to their potential as novel cancer-fighting drugs they have recently attracted increased attention. Nevertheless, they have a poor bioavailability. Cellular uptake is low, and they are quickly metabolized once inside the cell, requiring repetitive oral doses to achieve sufficient concentration inside the cell for therapeutic activity. The goal of this PhD project is to engineer a synthetic pathway for curcuminoid in a model bacterium and trigger its release concurrent with ultrasound treatment. The proposed tasks involve several design and engineering steps to program Escherichia coli to execute the new synthetic pathway triggered by a temperature increase. The heat shock response machinery of E. coli will be used as a sensor in the design of the model bacterium. Afterwards, the gene sequences of the enzymes that catalyze each reaction in the curcuminoid pathway will be synthesized and introduced in the E. coli genome applying several cloning strategies. Data from several well documented experiments on E. coli in relevant conditions that have been published were analyzed to select the most expressed heat shock genes in E. coli with the strongest heat shock promoters. The ibpA, dnaK and fxsA gene promoters were chosen based on their induction rates and expression and were validated by RT-qPCR and subsequently through the construction of a stress probe using an adequate reporter gene.Universidade do MinhoRodrigues, Joana Lúcia Lima Correia2012-05-292012-05-29T00:00:00Zconference objectinfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://hdl.handle.net/1822/32993engRodrigues, Joana Lúcia; Kluskens, Leon; Prather, Kristala; Rodrigues, L. R., Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coli. Abstracts Book of the 3rd MIT Portugal Conference - Excellence in Engineering for Innovation in Global Markets. Guimarães, Portugal, May 28-29, 33, 2012.http://www.mitportugal.org/conference-2012/conference-2012.htmlinfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-05-11T04:45:16Zoai:repositorium.sdum.uminho.pt:1822/32993Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T14:57:30.156271Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coli
title Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coli
spellingShingle Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coli
Rodrigues, Joana Lúcia Lima Correia
title_short Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coli
title_full Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coli
title_fullStr Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coli
title_full_unstemmed Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coli
title_sort Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coli
author Rodrigues, Joana Lúcia Lima Correia
author_facet Rodrigues, Joana Lúcia Lima Correia
author_role author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Rodrigues, Joana Lúcia Lima Correia
description Curcuminoids are produced by plants and due to their potential as novel cancer-fighting drugs they have recently attracted increased attention. Nevertheless, they have a poor bioavailability. Cellular uptake is low, and they are quickly metabolized once inside the cell, requiring repetitive oral doses to achieve sufficient concentration inside the cell for therapeutic activity. The goal of this PhD project is to engineer a synthetic pathway for curcuminoid in a model bacterium and trigger its release concurrent with ultrasound treatment. The proposed tasks involve several design and engineering steps to program Escherichia coli to execute the new synthetic pathway triggered by a temperature increase. The heat shock response machinery of E. coli will be used as a sensor in the design of the model bacterium. Afterwards, the gene sequences of the enzymes that catalyze each reaction in the curcuminoid pathway will be synthesized and introduced in the E. coli genome applying several cloning strategies. Data from several well documented experiments on E. coli in relevant conditions that have been published were analyzed to select the most expressed heat shock genes in E. coli with the strongest heat shock promoters. The ibpA, dnaK and fxsA gene promoters were chosen based on their induction rates and expression and were validated by RT-qPCR and subsequently through the construction of a stress probe using an adequate reporter gene.
publishDate 2012
dc.date.none.fl_str_mv 2012-05-29
2012-05-29T00:00:00Z
dc.type.driver.fl_str_mv conference object
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url http://hdl.handle.net/1822/32993
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Rodrigues, Joana Lúcia; Kluskens, Leon; Prather, Kristala; Rodrigues, L. R., Design and construction of a new biosynthetic pathway for the production of curcuminoids in Escherichia coli. Abstracts Book of the 3rd MIT Portugal Conference - Excellence in Engineering for Innovation in Global Markets. Guimarães, Portugal, May 28-29, 33, 2012.
http://www.mitportugal.org/conference-2012/conference-2012.html
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