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Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB

Bibliographic Details
Main Author: Buttimer, Colin
Publication Date: 2017
Other Authors: Hendrix, Hanne, Oliveira, Hugo Alexandre Mendes, Casey, Aidan, Neve, Horst, McAuliffe, Olivia, Ross, R. Paul, Hill, Colin, Noben, Jean-Paul, O'Mahony, Jim, Lavigne, Rob, Coffey, Aidan
Format: Article
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/1822/44461
Summary: Enterobacteria phage vB_PcaM_CBB is a jumbo phage belonging to the family Myoviridae. It possesses highly atypical whisker-like structures along the length of its contractile tail. It has a broad host range with the capability of infecting species of the genera Erwinia, Pectobacterium, and Cronobacter. With a genome of 355,922 bp, excluding a predicted terminal repeat of 22,456 bp, phage CBB is the third largest phage sequenced to date. Its genome was predicted to encode 554 ORFs with 33 tRNAs. Based on prediction and proteome analysis of the virions, 29% of its predicted ORFs could be functionally assigned. Protein comparison shows that CBB shares between 3338% of its proteins with Cronobacter phage GAP32, coliphages PBECO4 and 121Q as well as Klebsiella phage vB_KleM_Rak2. This work presents a detailed and comparative analysis of vB_PcaM_CBB of a highly atypical jumbo myoviridae phage, contributing to a better understanding of phage diversity and biology.
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spelling Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBBBacteriophagesBioinformaticsGenomeHost rangeJumbo bacteriophageMass spectrometryPFGE analysisTransmission electron microscopyEnterobacteria phage vB_PcaM_CBB is a jumbo phage belonging to the family Myoviridae. It possesses highly atypical whisker-like structures along the length of its contractile tail. It has a broad host range with the capability of infecting species of the genera Erwinia, Pectobacterium, and Cronobacter. With a genome of 355,922 bp, excluding a predicted terminal repeat of 22,456 bp, phage CBB is the third largest phage sequenced to date. Its genome was predicted to encode 554 ORFs with 33 tRNAs. Based on prediction and proteome analysis of the virions, 29% of its predicted ORFs could be functionally assigned. Protein comparison shows that CBB shares between 3338% of its proteins with Cronobacter phage GAP32, coliphages PBECO4 and 121Q as well as Klebsiella phage vB_KleM_Rak2. This work presents a detailed and comparative analysis of vB_PcaM_CBB of a highly atypical jumbo myoviridae phage, contributing to a better understanding of phage diversity and biology.Funding was provided by Cork Institute of Technology as a PhD fellowship to CB.Frontiers MediaUniversidade do MinhoButtimer, ColinHendrix, HanneOliveira, Hugo Alexandre MendesCasey, AidanNeve, HorstMcAuliffe, OliviaRoss, R. PaulHill, ColinNoben, Jean-PaulO'Mahony, JimLavigne, RobCoffey, Aidan20172017-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/44461engButtimer, Colin; Hendrix, Hanne; Oliveira, Hugo; Casey, Aidan; Neve, Horst; McAuliffe, Olivia; Ross, R. Paul; Hill, Colin; Noben, Jean-Paul; O'Mahony, Jim; Lavigne, Rob; Coffey, Aidan, Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB. Frontiers in Microbiology, 8(44), 20171664-302X10.3389/fmicb.2017.00044http://journal.frontiersin.org/journal/microbiologyinfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-05-11T06:48:14Zoai:repositorium.sdum.uminho.pt:1822/44461Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T16:04:50.962890Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB
title Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB
spellingShingle Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB
Buttimer, Colin
Bacteriophages
Bioinformatics
Genome
Host range
Jumbo bacteriophage
Mass spectrometry
PFGE analysis
Transmission electron microscopy
title_short Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB
title_full Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB
title_fullStr Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB
title_full_unstemmed Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB
title_sort Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB
author Buttimer, Colin
author_facet Buttimer, Colin
Hendrix, Hanne
Oliveira, Hugo Alexandre Mendes
Casey, Aidan
Neve, Horst
McAuliffe, Olivia
Ross, R. Paul
Hill, Colin
Noben, Jean-Paul
O'Mahony, Jim
Lavigne, Rob
Coffey, Aidan
author_role author
author2 Hendrix, Hanne
Oliveira, Hugo Alexandre Mendes
Casey, Aidan
Neve, Horst
McAuliffe, Olivia
Ross, R. Paul
Hill, Colin
Noben, Jean-Paul
O'Mahony, Jim
Lavigne, Rob
Coffey, Aidan
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Buttimer, Colin
Hendrix, Hanne
Oliveira, Hugo Alexandre Mendes
Casey, Aidan
Neve, Horst
McAuliffe, Olivia
Ross, R. Paul
Hill, Colin
Noben, Jean-Paul
O'Mahony, Jim
Lavigne, Rob
Coffey, Aidan
dc.subject.por.fl_str_mv Bacteriophages
Bioinformatics
Genome
Host range
Jumbo bacteriophage
Mass spectrometry
PFGE analysis
Transmission electron microscopy
topic Bacteriophages
Bioinformatics
Genome
Host range
Jumbo bacteriophage
Mass spectrometry
PFGE analysis
Transmission electron microscopy
description Enterobacteria phage vB_PcaM_CBB is a jumbo phage belonging to the family Myoviridae. It possesses highly atypical whisker-like structures along the length of its contractile tail. It has a broad host range with the capability of infecting species of the genera Erwinia, Pectobacterium, and Cronobacter. With a genome of 355,922 bp, excluding a predicted terminal repeat of 22,456 bp, phage CBB is the third largest phage sequenced to date. Its genome was predicted to encode 554 ORFs with 33 tRNAs. Based on prediction and proteome analysis of the virions, 29% of its predicted ORFs could be functionally assigned. Protein comparison shows that CBB shares between 3338% of its proteins with Cronobacter phage GAP32, coliphages PBECO4 and 121Q as well as Klebsiella phage vB_KleM_Rak2. This work presents a detailed and comparative analysis of vB_PcaM_CBB of a highly atypical jumbo myoviridae phage, contributing to a better understanding of phage diversity and biology.
publishDate 2017
dc.date.none.fl_str_mv 2017
2017-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/44461
url http://hdl.handle.net/1822/44461
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Buttimer, Colin; Hendrix, Hanne; Oliveira, Hugo; Casey, Aidan; Neve, Horst; McAuliffe, Olivia; Ross, R. Paul; Hill, Colin; Noben, Jean-Paul; O'Mahony, Jim; Lavigne, Rob; Coffey, Aidan, Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB. Frontiers in Microbiology, 8(44), 2017
1664-302X
10.3389/fmicb.2017.00044
http://journal.frontiersin.org/journal/microbiology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Frontiers Media
publisher.none.fl_str_mv Frontiers Media
dc.source.none.fl_str_mv reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron:RCAAP
instname_str FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron_str RCAAP
institution RCAAP
reponame_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
collection Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository.name.fl_str_mv Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
repository.mail.fl_str_mv info@rcaap.pt
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