Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms
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Publication Date: | 2012 |
Other Authors: | , , , , , , , , , , , , |
Language: | eng |
Source: | Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
Download full: | http://hdl.handle.net/1822/34025 |
Summary: | It has been estimated that 80% of the human infections are associated with biofilms. These microbial communities develop associated with surfaces, such as catheters, and contribute to the chronicity and spreading of the infections and device loss. To date, the conclusive diagnosis of catheter-associated infection relies on the removal of the device, culture of associated microorganisms and their subsequent identification. The objective of this work was to evaluate the usefulness of culturomics associated with matrix-assisted laser desorption/ionisation - time of flight mass spectrometry (MALDI-TOF MS) for the detection and identification of dialysis catheter associated microorganisms. A prospective observational study was carried out on catheters explanted from adult patients on renal replacement therapy with peritoneal dialysis (PD) and haemodialysis (HD). During a five-month period different segments of PD and HD catheters were analysed. Specifically, the samples were cultured on blood agar and the subsequent identification of the isolated microorganisms was performed using selective/differential culture media and MALDI-TOF MS. A total of 54 PD and 22 HD catheters were analysed. The frequency of microbial recovery, defined as a positive culture in at least one segment of the catheter, was found to be 44% for PD catheters and 77% for HD catheters. Polymicrobial cultures were only identified on PD catheters (20% of the positive cultures). Seventy-nine isolates were analysed by MALDI-TOF MS: 77.2% were identified at the species level, comprising eight genera and 10 species; 6.3% were identified at the genus level, comprising Corynebacterium and Sphingomonas bacteria; 16.5% were not identified. The non-identified isolates (11 from PD and 2 from HD) included grampositive (n= 9), gram-negative (n= 2) and fungal (n= 2) species, as determined by presumptive identification. Our results show that MALDI-TOF MS is a powerful method for the identification of catheter-associated bacteria, particularly derived from HD. |
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Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganismsDialyisMALDI-TOF MSIt has been estimated that 80% of the human infections are associated with biofilms. These microbial communities develop associated with surfaces, such as catheters, and contribute to the chronicity and spreading of the infections and device loss. To date, the conclusive diagnosis of catheter-associated infection relies on the removal of the device, culture of associated microorganisms and their subsequent identification. The objective of this work was to evaluate the usefulness of culturomics associated with matrix-assisted laser desorption/ionisation - time of flight mass spectrometry (MALDI-TOF MS) for the detection and identification of dialysis catheter associated microorganisms. A prospective observational study was carried out on catheters explanted from adult patients on renal replacement therapy with peritoneal dialysis (PD) and haemodialysis (HD). During a five-month period different segments of PD and HD catheters were analysed. Specifically, the samples were cultured on blood agar and the subsequent identification of the isolated microorganisms was performed using selective/differential culture media and MALDI-TOF MS. A total of 54 PD and 22 HD catheters were analysed. The frequency of microbial recovery, defined as a positive culture in at least one segment of the catheter, was found to be 44% for PD catheters and 77% for HD catheters. Polymicrobial cultures were only identified on PD catheters (20% of the positive cultures). Seventy-nine isolates were analysed by MALDI-TOF MS: 77.2% were identified at the species level, comprising eight genera and 10 species; 6.3% were identified at the genus level, comprising Corynebacterium and Sphingomonas bacteria; 16.5% were not identified. The non-identified isolates (11 from PD and 2 from HD) included grampositive (n= 9), gram-negative (n= 2) and fungal (n= 2) species, as determined by presumptive identification. Our results show that MALDI-TOF MS is a powerful method for the identification of catheter-associated bacteria, particularly derived from HD.POPH-QREN and co-funded by FSE and MCTES (SFRH/BPD/73663/2010)European Communitys Seventh Framework Program (FP7, 2007e2013)Hpa Microbiology ServicesUniversidade do MinhoMartins, Margarida Isabel Barros CoelhoSantos, CledirMachado, DianaMaciel, M. H. C.Lima, NelsonSantos, OlíviaRodrigues, AnabelaCabrita, AntónioCarvalho, Maria JoãoSilva, H.SIlva, FernandaQueirós, JoséGomes, Ana MartaOliveira, Rosário20122012-01-01T00:00:00Zconference objectinfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://hdl.handle.net/1822/34025engMartins, Margarida; Santos, C.; Machado, Diana; Maciel, M. H. C.; Lima, Nelson; Santos, Olívia; Rodrigues, Anabela; Cabrita, António; Carvalho, Maria João; Silva, Hugo; SIlva, Fernanda; Queirós, José; Gomes, Ana Marta; Oliveira, Rosário, Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms. Microbial Diagnostic Applications of Mass Spectrometry. London, England, April 4-5, 3, 2012.info:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-05-11T04:48:24Zoai:repositorium.sdum.uminho.pt:1822/34025Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T14:59:01.253403Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse |
dc.title.none.fl_str_mv |
Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms |
title |
Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms |
spellingShingle |
Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms Martins, Margarida Isabel Barros Coelho Dialyis MALDI-TOF MS |
title_short |
Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms |
title_full |
Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms |
title_fullStr |
Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms |
title_full_unstemmed |
Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms |
title_sort |
Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms |
author |
Martins, Margarida Isabel Barros Coelho |
author_facet |
Martins, Margarida Isabel Barros Coelho Santos, Cledir Machado, Diana Maciel, M. H. C. Lima, Nelson Santos, Olívia Rodrigues, Anabela Cabrita, António Carvalho, Maria João Silva, H. SIlva, Fernanda Queirós, José Gomes, Ana Marta Oliveira, Rosário |
author_role |
author |
author2 |
Santos, Cledir Machado, Diana Maciel, M. H. C. Lima, Nelson Santos, Olívia Rodrigues, Anabela Cabrita, António Carvalho, Maria João Silva, H. SIlva, Fernanda Queirós, José Gomes, Ana Marta Oliveira, Rosário |
author2_role |
author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Martins, Margarida Isabel Barros Coelho Santos, Cledir Machado, Diana Maciel, M. H. C. Lima, Nelson Santos, Olívia Rodrigues, Anabela Cabrita, António Carvalho, Maria João Silva, H. SIlva, Fernanda Queirós, José Gomes, Ana Marta Oliveira, Rosário |
dc.subject.por.fl_str_mv |
Dialyis MALDI-TOF MS |
topic |
Dialyis MALDI-TOF MS |
description |
It has been estimated that 80% of the human infections are associated with biofilms. These microbial communities develop associated with surfaces, such as catheters, and contribute to the chronicity and spreading of the infections and device loss. To date, the conclusive diagnosis of catheter-associated infection relies on the removal of the device, culture of associated microorganisms and their subsequent identification. The objective of this work was to evaluate the usefulness of culturomics associated with matrix-assisted laser desorption/ionisation - time of flight mass spectrometry (MALDI-TOF MS) for the detection and identification of dialysis catheter associated microorganisms. A prospective observational study was carried out on catheters explanted from adult patients on renal replacement therapy with peritoneal dialysis (PD) and haemodialysis (HD). During a five-month period different segments of PD and HD catheters were analysed. Specifically, the samples were cultured on blood agar and the subsequent identification of the isolated microorganisms was performed using selective/differential culture media and MALDI-TOF MS. A total of 54 PD and 22 HD catheters were analysed. The frequency of microbial recovery, defined as a positive culture in at least one segment of the catheter, was found to be 44% for PD catheters and 77% for HD catheters. Polymicrobial cultures were only identified on PD catheters (20% of the positive cultures). Seventy-nine isolates were analysed by MALDI-TOF MS: 77.2% were identified at the species level, comprising eight genera and 10 species; 6.3% were identified at the genus level, comprising Corynebacterium and Sphingomonas bacteria; 16.5% were not identified. The non-identified isolates (11 from PD and 2 from HD) included grampositive (n= 9), gram-negative (n= 2) and fungal (n= 2) species, as determined by presumptive identification. Our results show that MALDI-TOF MS is a powerful method for the identification of catheter-associated bacteria, particularly derived from HD. |
publishDate |
2012 |
dc.date.none.fl_str_mv |
2012 2012-01-01T00:00:00Z |
dc.type.driver.fl_str_mv |
conference object |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/1822/34025 |
url |
http://hdl.handle.net/1822/34025 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Martins, Margarida; Santos, C.; Machado, Diana; Maciel, M. H. C.; Lima, Nelson; Santos, Olívia; Rodrigues, Anabela; Cabrita, António; Carvalho, Maria João; Silva, Hugo; SIlva, Fernanda; Queirós, José; Gomes, Ana Marta; Oliveira, Rosário, Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms. Microbial Diagnostic Applications of Mass Spectrometry. London, England, April 4-5, 3, 2012. |
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info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
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application/pdf |
dc.publisher.none.fl_str_mv |
Hpa Microbiology Services |
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Hpa Microbiology Services |
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