Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms

Bibliographic Details
Main Author: Martins, Margarida Isabel Barros Coelho
Publication Date: 2012
Other Authors: Santos, Cledir, Machado, Diana, Maciel, M. H. C., Lima, Nelson, Santos, Olívia, Rodrigues, Anabela, Cabrita, António, Carvalho, Maria João, Silva, H., SIlva, Fernanda, Queirós, José, Gomes, Ana Marta, Oliveira, Rosário
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/1822/34025
Summary: It has been estimated that 80% of the human infections are associated with biofilms. These microbial communities develop associated with surfaces, such as catheters, and contribute to the chronicity and spreading of the infections and device loss. To date, the conclusive diagnosis of catheter-associated infection relies on the removal of the device, culture of associated microorganisms and their subsequent identification. The objective of this work was to evaluate the usefulness of culturomics associated with matrix-assisted laser desorption/ionisation - time of flight mass spectrometry (MALDI-TOF MS) for the detection and identification of dialysis catheter associated microorganisms. A prospective observational study was carried out on catheters explanted from adult patients on renal replacement therapy with peritoneal dialysis (PD) and haemodialysis (HD). During a five-month period different segments of PD and HD catheters were analysed. Specifically, the samples were cultured on blood agar and the subsequent identification of the isolated microorganisms was performed using selective/differential culture media and MALDI-TOF MS. A total of 54 PD and 22 HD catheters were analysed. The frequency of microbial recovery, defined as a positive culture in at least one segment of the catheter, was found to be 44% for PD catheters and 77% for HD catheters. Polymicrobial cultures were only identified on PD catheters (20% of the positive cultures). Seventy-nine isolates were analysed by MALDI-TOF MS: 77.2% were identified at the species level, comprising eight genera and 10 species; 6.3% were identified at the genus level, comprising Corynebacterium and Sphingomonas bacteria; 16.5% were not identified. The non-identified isolates (11 from PD and 2 from HD) included grampositive (n= 9), gram-negative (n= 2) and fungal (n= 2) species, as determined by presumptive identification. Our results show that MALDI-TOF MS is a powerful method for the identification of catheter-associated bacteria, particularly derived from HD.
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spelling Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganismsDialyisMALDI-TOF MSIt has been estimated that 80% of the human infections are associated with biofilms. These microbial communities develop associated with surfaces, such as catheters, and contribute to the chronicity and spreading of the infections and device loss. To date, the conclusive diagnosis of catheter-associated infection relies on the removal of the device, culture of associated microorganisms and their subsequent identification. The objective of this work was to evaluate the usefulness of culturomics associated with matrix-assisted laser desorption/ionisation - time of flight mass spectrometry (MALDI-TOF MS) for the detection and identification of dialysis catheter associated microorganisms. A prospective observational study was carried out on catheters explanted from adult patients on renal replacement therapy with peritoneal dialysis (PD) and haemodialysis (HD). During a five-month period different segments of PD and HD catheters were analysed. Specifically, the samples were cultured on blood agar and the subsequent identification of the isolated microorganisms was performed using selective/differential culture media and MALDI-TOF MS. A total of 54 PD and 22 HD catheters were analysed. The frequency of microbial recovery, defined as a positive culture in at least one segment of the catheter, was found to be 44% for PD catheters and 77% for HD catheters. Polymicrobial cultures were only identified on PD catheters (20% of the positive cultures). Seventy-nine isolates were analysed by MALDI-TOF MS: 77.2% were identified at the species level, comprising eight genera and 10 species; 6.3% were identified at the genus level, comprising Corynebacterium and Sphingomonas bacteria; 16.5% were not identified. The non-identified isolates (11 from PD and 2 from HD) included grampositive (n= 9), gram-negative (n= 2) and fungal (n= 2) species, as determined by presumptive identification. Our results show that MALDI-TOF MS is a powerful method for the identification of catheter-associated bacteria, particularly derived from HD.POPH-QREN and co-funded by FSE and MCTES (SFRH/BPD/73663/2010)European Communitys Seventh Framework Program (FP7, 2007e2013)Hpa Microbiology ServicesUniversidade do MinhoMartins, Margarida Isabel Barros CoelhoSantos, CledirMachado, DianaMaciel, M. H. C.Lima, NelsonSantos, OlíviaRodrigues, AnabelaCabrita, AntónioCarvalho, Maria JoãoSilva, H.SIlva, FernandaQueirós, JoséGomes, Ana MartaOliveira, Rosário20122012-01-01T00:00:00Zconference objectinfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://hdl.handle.net/1822/34025engMartins, Margarida; Santos, C.; Machado, Diana; Maciel, M. H. C.; Lima, Nelson; Santos, Olívia; Rodrigues, Anabela; Cabrita, António; Carvalho, Maria João; Silva, Hugo; SIlva, Fernanda; Queirós, José; Gomes, Ana Marta; Oliveira, Rosário, Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms. Microbial Diagnostic Applications of Mass Spectrometry. London, England, April 4-5, 3, 2012.info:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-05-11T04:48:24Zoai:repositorium.sdum.uminho.pt:1822/34025Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T14:59:01.253403Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms
title Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms
spellingShingle Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms
Martins, Margarida Isabel Barros Coelho
Dialyis
MALDI-TOF MS
title_short Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms
title_full Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms
title_fullStr Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms
title_full_unstemmed Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms
title_sort Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms
author Martins, Margarida Isabel Barros Coelho
author_facet Martins, Margarida Isabel Barros Coelho
Santos, Cledir
Machado, Diana
Maciel, M. H. C.
Lima, Nelson
Santos, Olívia
Rodrigues, Anabela
Cabrita, António
Carvalho, Maria João
Silva, H.
SIlva, Fernanda
Queirós, José
Gomes, Ana Marta
Oliveira, Rosário
author_role author
author2 Santos, Cledir
Machado, Diana
Maciel, M. H. C.
Lima, Nelson
Santos, Olívia
Rodrigues, Anabela
Cabrita, António
Carvalho, Maria João
Silva, H.
SIlva, Fernanda
Queirós, José
Gomes, Ana Marta
Oliveira, Rosário
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Martins, Margarida Isabel Barros Coelho
Santos, Cledir
Machado, Diana
Maciel, M. H. C.
Lima, Nelson
Santos, Olívia
Rodrigues, Anabela
Cabrita, António
Carvalho, Maria João
Silva, H.
SIlva, Fernanda
Queirós, José
Gomes, Ana Marta
Oliveira, Rosário
dc.subject.por.fl_str_mv Dialyis
MALDI-TOF MS
topic Dialyis
MALDI-TOF MS
description It has been estimated that 80% of the human infections are associated with biofilms. These microbial communities develop associated with surfaces, such as catheters, and contribute to the chronicity and spreading of the infections and device loss. To date, the conclusive diagnosis of catheter-associated infection relies on the removal of the device, culture of associated microorganisms and their subsequent identification. The objective of this work was to evaluate the usefulness of culturomics associated with matrix-assisted laser desorption/ionisation - time of flight mass spectrometry (MALDI-TOF MS) for the detection and identification of dialysis catheter associated microorganisms. A prospective observational study was carried out on catheters explanted from adult patients on renal replacement therapy with peritoneal dialysis (PD) and haemodialysis (HD). During a five-month period different segments of PD and HD catheters were analysed. Specifically, the samples were cultured on blood agar and the subsequent identification of the isolated microorganisms was performed using selective/differential culture media and MALDI-TOF MS. A total of 54 PD and 22 HD catheters were analysed. The frequency of microbial recovery, defined as a positive culture in at least one segment of the catheter, was found to be 44% for PD catheters and 77% for HD catheters. Polymicrobial cultures were only identified on PD catheters (20% of the positive cultures). Seventy-nine isolates were analysed by MALDI-TOF MS: 77.2% were identified at the species level, comprising eight genera and 10 species; 6.3% were identified at the genus level, comprising Corynebacterium and Sphingomonas bacteria; 16.5% were not identified. The non-identified isolates (11 from PD and 2 from HD) included grampositive (n= 9), gram-negative (n= 2) and fungal (n= 2) species, as determined by presumptive identification. Our results show that MALDI-TOF MS is a powerful method for the identification of catheter-associated bacteria, particularly derived from HD.
publishDate 2012
dc.date.none.fl_str_mv 2012
2012-01-01T00:00:00Z
dc.type.driver.fl_str_mv conference object
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/34025
url http://hdl.handle.net/1822/34025
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Martins, Margarida; Santos, C.; Machado, Diana; Maciel, M. H. C.; Lima, Nelson; Santos, Olívia; Rodrigues, Anabela; Cabrita, António; Carvalho, Maria João; Silva, Hugo; SIlva, Fernanda; Queirós, José; Gomes, Ana Marta; Oliveira, Rosário, Application of MALDI-TOF MS to the identification of dialysis catheters associated microorganisms. Microbial Diagnostic Applications of Mass Spectrometry. London, England, April 4-5, 3, 2012.
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Hpa Microbiology Services
publisher.none.fl_str_mv Hpa Microbiology Services
dc.source.none.fl_str_mv reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
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instname_str FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
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reponame_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
collection Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository.name.fl_str_mv Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
repository.mail.fl_str_mv info@rcaap.pt
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