COPD profiles and treatable traits using minimal resources: identification, decision tree and longitudinal stability

Bibliographic Details
Main Author: Marques, A.
Publication Date: 2021
Other Authors: Souto-Miranda, S., Machado, A. F., Oliveira, A., Jácome, C., Cruz, J., Enes, V., Afreixo, V., Martins, V., Andrade, L., Valente, C., Ferreira, D., Simão, P., Brooks, D., Tavares, A. H.
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/10773/36794
Summary: Introduction: Chronic obstructive pulmonary disease (COPD) is highly heterogeneous and complex. Hence, personalising assessments and treatments to this population across different settings and available resources imposes challenges and debate. Research efforts have been made to identify clinical phenotypes or profiles for prognostic and therapeutic purposes. Nevertheless, such profiles often do not describe treatable traits, focus on complex physiological/ pulmonary measures which are frequently not available across settings, lack validation and/or their stability over time is unknown. Objectives: To identify profiles and their treatable traits based on simple and meaningful measures; to develop and validate a profile decision tree; and to explore profiles’ stability over time in people with COPD. Methods: An observational, prospective study was conducted with people with COPD. Clinical characteristics, lung function, symptoms, impact of the disease (COPD assessment test–CAT), healthrelated quality of life, physical activity, lower-limb muscle strength and functional status were collected cross-sectionally and a subsample was followed-up monthly over six months. A principal component analysis and a clustering procedure with k-medoids were applied to identify profiles. Pulmonary and extrapulmonary (i.e., physical, symptoms and health status, and behavioural/life-style risk factors) treatable traits were identified in each profile based on the established cut-offs for each measure available in the literature. The decision tree was developed with 70% and validated with 30% of the sample, cross-sectionally. Agreement between the profile predicted by the decision tree and the profile defined by the clustering procedure was determined using Cohen’s Kappa. Stability was explored over time with a stability score defined as the percentage ratio between the number of timepoints that a participant was classified in the same profile (most frequent profile for that participant) and the total number of timepoints (i.e., 6). Results: 352 people with COPD (67.4 ± 9.9 years; 78.1% male; FEV1 = 56.2 ± 20.6% predicted) participated and 90 (67.6 ± 8.9 years; 85.6% male; FEV1 = 52.1 ± 19.9% predicted) were followedup. Four profiles were identified with distinct treatable traits. The decision tree was composed by the CAT, age and FEV1% predicted and had an agreement of 71.7% (Cohen’s Kappa = 0.62, p < 0.001) with the actual profiles. 48.9% of participants remained in the same profile whilst 51.1% moved between two (47.8%) and three (3.3%) profiles over time. The overall stability of profiles was 86.8 ± 15%. Conclusions: Profiles and treatable traits can be identified in people with COPD with simple and meaningful measures possibly available even in minimal-resource settings. Regular assessments are recommended as people with COPD may change profile over time and hence their needs of personalised treatment.
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spelling COPD profiles and treatable traits using minimal resources: identification, decision tree and longitudinal stabilityClinical phenotypesProfilesClustersTreatable traitsDecision treeCOPDIntroduction: Chronic obstructive pulmonary disease (COPD) is highly heterogeneous and complex. Hence, personalising assessments and treatments to this population across different settings and available resources imposes challenges and debate. Research efforts have been made to identify clinical phenotypes or profiles for prognostic and therapeutic purposes. Nevertheless, such profiles often do not describe treatable traits, focus on complex physiological/ pulmonary measures which are frequently not available across settings, lack validation and/or their stability over time is unknown. Objectives: To identify profiles and their treatable traits based on simple and meaningful measures; to develop and validate a profile decision tree; and to explore profiles’ stability over time in people with COPD. Methods: An observational, prospective study was conducted with people with COPD. Clinical characteristics, lung function, symptoms, impact of the disease (COPD assessment test–CAT), healthrelated quality of life, physical activity, lower-limb muscle strength and functional status were collected cross-sectionally and a subsample was followed-up monthly over six months. A principal component analysis and a clustering procedure with k-medoids were applied to identify profiles. Pulmonary and extrapulmonary (i.e., physical, symptoms and health status, and behavioural/life-style risk factors) treatable traits were identified in each profile based on the established cut-offs for each measure available in the literature. The decision tree was developed with 70% and validated with 30% of the sample, cross-sectionally. Agreement between the profile predicted by the decision tree and the profile defined by the clustering procedure was determined using Cohen’s Kappa. Stability was explored over time with a stability score defined as the percentage ratio between the number of timepoints that a participant was classified in the same profile (most frequent profile for that participant) and the total number of timepoints (i.e., 6). Results: 352 people with COPD (67.4 ± 9.9 years; 78.1% male; FEV1 = 56.2 ± 20.6% predicted) participated and 90 (67.6 ± 8.9 years; 85.6% male; FEV1 = 52.1 ± 19.9% predicted) were followedup. Four profiles were identified with distinct treatable traits. The decision tree was composed by the CAT, age and FEV1% predicted and had an agreement of 71.7% (Cohen’s Kappa = 0.62, p < 0.001) with the actual profiles. 48.9% of participants remained in the same profile whilst 51.1% moved between two (47.8%) and three (3.3%) profiles over time. The overall stability of profiles was 86.8 ± 15%. Conclusions: Profiles and treatable traits can be identified in people with COPD with simple and meaningful measures possibly available even in minimal-resource settings. Regular assessments are recommended as people with COPD may change profile over time and hence their needs of personalised treatment.Sociedade Portuguesa de Pneumologia; Elsevier2023-03-31T18:17:53Z2021-01-01T00:00:00Z2021conference objectinfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://hdl.handle.net/10773/36794engMarques, A.Souto-Miranda, S.Machado, A. F.Oliveira, A.Jácome, C.Cruz, J.Enes, V.Afreixo, V.Martins, V.Andrade, L.Valente, C.Ferreira, D.Simão, P.Brooks, D.Tavares, A. H.info:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-05-06T04:42:44Zoai:ria.ua.pt:10773/36794Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T14:17:47.350308Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv COPD profiles and treatable traits using minimal resources: identification, decision tree and longitudinal stability
title COPD profiles and treatable traits using minimal resources: identification, decision tree and longitudinal stability
spellingShingle COPD profiles and treatable traits using minimal resources: identification, decision tree and longitudinal stability
Marques, A.
Clinical phenotypes
Profiles
Clusters
Treatable traits
Decision tree
COPD
title_short COPD profiles and treatable traits using minimal resources: identification, decision tree and longitudinal stability
title_full COPD profiles and treatable traits using minimal resources: identification, decision tree and longitudinal stability
title_fullStr COPD profiles and treatable traits using minimal resources: identification, decision tree and longitudinal stability
title_full_unstemmed COPD profiles and treatable traits using minimal resources: identification, decision tree and longitudinal stability
title_sort COPD profiles and treatable traits using minimal resources: identification, decision tree and longitudinal stability
author Marques, A.
author_facet Marques, A.
Souto-Miranda, S.
Machado, A. F.
Oliveira, A.
Jácome, C.
Cruz, J.
Enes, V.
Afreixo, V.
Martins, V.
Andrade, L.
Valente, C.
Ferreira, D.
Simão, P.
Brooks, D.
Tavares, A. H.
author_role author
author2 Souto-Miranda, S.
Machado, A. F.
Oliveira, A.
Jácome, C.
Cruz, J.
Enes, V.
Afreixo, V.
Martins, V.
Andrade, L.
Valente, C.
Ferreira, D.
Simão, P.
Brooks, D.
Tavares, A. H.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Marques, A.
Souto-Miranda, S.
Machado, A. F.
Oliveira, A.
Jácome, C.
Cruz, J.
Enes, V.
Afreixo, V.
Martins, V.
Andrade, L.
Valente, C.
Ferreira, D.
Simão, P.
Brooks, D.
Tavares, A. H.
dc.subject.por.fl_str_mv Clinical phenotypes
Profiles
Clusters
Treatable traits
Decision tree
COPD
topic Clinical phenotypes
Profiles
Clusters
Treatable traits
Decision tree
COPD
description Introduction: Chronic obstructive pulmonary disease (COPD) is highly heterogeneous and complex. Hence, personalising assessments and treatments to this population across different settings and available resources imposes challenges and debate. Research efforts have been made to identify clinical phenotypes or profiles for prognostic and therapeutic purposes. Nevertheless, such profiles often do not describe treatable traits, focus on complex physiological/ pulmonary measures which are frequently not available across settings, lack validation and/or their stability over time is unknown. Objectives: To identify profiles and their treatable traits based on simple and meaningful measures; to develop and validate a profile decision tree; and to explore profiles’ stability over time in people with COPD. Methods: An observational, prospective study was conducted with people with COPD. Clinical characteristics, lung function, symptoms, impact of the disease (COPD assessment test–CAT), healthrelated quality of life, physical activity, lower-limb muscle strength and functional status were collected cross-sectionally and a subsample was followed-up monthly over six months. A principal component analysis and a clustering procedure with k-medoids were applied to identify profiles. Pulmonary and extrapulmonary (i.e., physical, symptoms and health status, and behavioural/life-style risk factors) treatable traits were identified in each profile based on the established cut-offs for each measure available in the literature. The decision tree was developed with 70% and validated with 30% of the sample, cross-sectionally. Agreement between the profile predicted by the decision tree and the profile defined by the clustering procedure was determined using Cohen’s Kappa. Stability was explored over time with a stability score defined as the percentage ratio between the number of timepoints that a participant was classified in the same profile (most frequent profile for that participant) and the total number of timepoints (i.e., 6). Results: 352 people with COPD (67.4 ± 9.9 years; 78.1% male; FEV1 = 56.2 ± 20.6% predicted) participated and 90 (67.6 ± 8.9 years; 85.6% male; FEV1 = 52.1 ± 19.9% predicted) were followedup. Four profiles were identified with distinct treatable traits. The decision tree was composed by the CAT, age and FEV1% predicted and had an agreement of 71.7% (Cohen’s Kappa = 0.62, p < 0.001) with the actual profiles. 48.9% of participants remained in the same profile whilst 51.1% moved between two (47.8%) and three (3.3%) profiles over time. The overall stability of profiles was 86.8 ± 15%. Conclusions: Profiles and treatable traits can be identified in people with COPD with simple and meaningful measures possibly available even in minimal-resource settings. Regular assessments are recommended as people with COPD may change profile over time and hence their needs of personalised treatment.
publishDate 2021
dc.date.none.fl_str_mv 2021-01-01T00:00:00Z
2021
2023-03-31T18:17:53Z
dc.type.driver.fl_str_mv conference object
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dc.publisher.none.fl_str_mv Sociedade Portuguesa de Pneumologia; Elsevier
publisher.none.fl_str_mv Sociedade Portuguesa de Pneumologia; Elsevier
dc.source.none.fl_str_mv reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
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reponame_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
collection Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository.name.fl_str_mv Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
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