Metabolic profiling of renal cell carcinoma tissue using gas chromatography metabolomics

Detalhes bibliográficos
Autor(a) principal: Amaro, Filipa
Data de Publicação: 2024
Outros Autores: Carvalho, Márcia, Carvalho-Maia, Carina, Jerónimo, Carmen, Henrique, Rui, Bastos, Maria de Lourdes, Guedes de Pinho, Paula, Pinto, Joana
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Texto Completo: https://doi.org/10.48797/sl.2024.243
Resumo: Background: Renal cell carcinoma (RCC) is marked by dysregulation of angiogenesis, energy metabolism, and nutrient sensing pathways [1]. This diversity is an obstacle to achieving long-term responses to treatment, notwithstanding progress in targeted and immunotherapeutic drugs. Objective: This study aimed to characterise the metabolic dysregulations that occur in RCC tissue using a metabolomics approach. Methods: Tumour and non-tumour kidney tissues were collected from 18 patients who underwent nephrectomy at the Portuguese Oncology Institute of Porto (IPO-Porto). Ethical approval (238/2018) and written consent were obtained. Tissues were homogenised, and metabolites were extracted using a methanol-water technique. Metabolites were then analysed by gas chromatography-mass spectrometry (GC-MS) analysis. Statistical methods and pathway analysis were used to interpret potential dysregulations associated with RCC. Results: RCC tissue showed a significant reduction in amino acid levels (including alanine, asparagine, aspartate, serine, tyrosine, among others), except for β-alanine and glutamate, which exhibited significant elevated levels. Perturbations in organic acids were observed, with a significant decrease in fumarate and gluconate levels and an increase in 3-aminobutyrate, citrate, and lactate. Increased levels of glucose and maltose were also found in RCC tissue, whereas sugar derivatives such as myo-inositol and scyllo-inositol showed decreased levels. Pathway analysis suggested dysregulation in amino acid, energy (TCA cycle, pyruvate metabolism), sugar, and glutathione metabolism pathways in RCC tissue. Conclusions: These results reveal the metabolic reprogramming related with the development and progression of RCC. Understanding these alterations provides important insights for improving RCC treatment strategies.
id RCAP_0b5fbf99ded72d8a3f8da0f55cd35ce0
oai_identifier_str oai:publicacoes.cespu.pt:article/243
network_acronym_str RCAP
network_name_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository_id_str https://opendoar.ac.uk/repository/7160
spelling Metabolic profiling of renal cell carcinoma tissue using gas chromatography metabolomicsPosterBackground: Renal cell carcinoma (RCC) is marked by dysregulation of angiogenesis, energy metabolism, and nutrient sensing pathways [1]. This diversity is an obstacle to achieving long-term responses to treatment, notwithstanding progress in targeted and immunotherapeutic drugs. Objective: This study aimed to characterise the metabolic dysregulations that occur in RCC tissue using a metabolomics approach. Methods: Tumour and non-tumour kidney tissues were collected from 18 patients who underwent nephrectomy at the Portuguese Oncology Institute of Porto (IPO-Porto). Ethical approval (238/2018) and written consent were obtained. Tissues were homogenised, and metabolites were extracted using a methanol-water technique. Metabolites were then analysed by gas chromatography-mass spectrometry (GC-MS) analysis. Statistical methods and pathway analysis were used to interpret potential dysregulations associated with RCC. Results: RCC tissue showed a significant reduction in amino acid levels (including alanine, asparagine, aspartate, serine, tyrosine, among others), except for β-alanine and glutamate, which exhibited significant elevated levels. Perturbations in organic acids were observed, with a significant decrease in fumarate and gluconate levels and an increase in 3-aminobutyrate, citrate, and lactate. Increased levels of glucose and maltose were also found in RCC tissue, whereas sugar derivatives such as myo-inositol and scyllo-inositol showed decreased levels. Pathway analysis suggested dysregulation in amino acid, energy (TCA cycle, pyruvate metabolism), sugar, and glutathione metabolism pathways in RCC tissue. Conclusions: These results reveal the metabolic reprogramming related with the development and progression of RCC. Understanding these alterations provides important insights for improving RCC treatment strategies.IUCS-CESPU Publishing2024-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://doi.org/10.48797/sl.2024.243https://doi.org/10.48797/sl.2024.243Scientific Letters; Vol. 1 No. Sup 1 (2024)2795-5117reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAPenghttps://publicacoes.cespu.pt/index.php/sl/article/view/243https://publicacoes.cespu.pt/index.php/sl/article/view/243/254Copyright (c) 2024 Filipa Amaro, Márcia Carvalho, Carina Carvalho-Maia, Carmen Jerónimo, Rui Henrique, Maria de Lourdes Bastos, Paula Guedes de Pinho, Joana Pintoinfo:eu-repo/semantics/openAccessAmaro, FilipaCarvalho, MárciaCarvalho-Maia, CarinaJerónimo, CarmenHenrique, RuiBastos, Maria de LourdesGuedes de Pinho, PaulaPinto, Joana2024-05-04T08:47:25Zoai:publicacoes.cespu.pt:article/243Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T13:34:08.489787Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Metabolic profiling of renal cell carcinoma tissue using gas chromatography metabolomics
title Metabolic profiling of renal cell carcinoma tissue using gas chromatography metabolomics
spellingShingle Metabolic profiling of renal cell carcinoma tissue using gas chromatography metabolomics
Amaro, Filipa
Poster
title_short Metabolic profiling of renal cell carcinoma tissue using gas chromatography metabolomics
title_full Metabolic profiling of renal cell carcinoma tissue using gas chromatography metabolomics
title_fullStr Metabolic profiling of renal cell carcinoma tissue using gas chromatography metabolomics
title_full_unstemmed Metabolic profiling of renal cell carcinoma tissue using gas chromatography metabolomics
title_sort Metabolic profiling of renal cell carcinoma tissue using gas chromatography metabolomics
author Amaro, Filipa
author_facet Amaro, Filipa
Carvalho, Márcia
Carvalho-Maia, Carina
Jerónimo, Carmen
Henrique, Rui
Bastos, Maria de Lourdes
Guedes de Pinho, Paula
Pinto, Joana
author_role author
author2 Carvalho, Márcia
Carvalho-Maia, Carina
Jerónimo, Carmen
Henrique, Rui
Bastos, Maria de Lourdes
Guedes de Pinho, Paula
Pinto, Joana
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Amaro, Filipa
Carvalho, Márcia
Carvalho-Maia, Carina
Jerónimo, Carmen
Henrique, Rui
Bastos, Maria de Lourdes
Guedes de Pinho, Paula
Pinto, Joana
dc.subject.por.fl_str_mv Poster
topic Poster
description Background: Renal cell carcinoma (RCC) is marked by dysregulation of angiogenesis, energy metabolism, and nutrient sensing pathways [1]. This diversity is an obstacle to achieving long-term responses to treatment, notwithstanding progress in targeted and immunotherapeutic drugs. Objective: This study aimed to characterise the metabolic dysregulations that occur in RCC tissue using a metabolomics approach. Methods: Tumour and non-tumour kidney tissues were collected from 18 patients who underwent nephrectomy at the Portuguese Oncology Institute of Porto (IPO-Porto). Ethical approval (238/2018) and written consent were obtained. Tissues were homogenised, and metabolites were extracted using a methanol-water technique. Metabolites were then analysed by gas chromatography-mass spectrometry (GC-MS) analysis. Statistical methods and pathway analysis were used to interpret potential dysregulations associated with RCC. Results: RCC tissue showed a significant reduction in amino acid levels (including alanine, asparagine, aspartate, serine, tyrosine, among others), except for β-alanine and glutamate, which exhibited significant elevated levels. Perturbations in organic acids were observed, with a significant decrease in fumarate and gluconate levels and an increase in 3-aminobutyrate, citrate, and lactate. Increased levels of glucose and maltose were also found in RCC tissue, whereas sugar derivatives such as myo-inositol and scyllo-inositol showed decreased levels. Pathway analysis suggested dysregulation in amino acid, energy (TCA cycle, pyruvate metabolism), sugar, and glutathione metabolism pathways in RCC tissue. Conclusions: These results reveal the metabolic reprogramming related with the development and progression of RCC. Understanding these alterations provides important insights for improving RCC treatment strategies.
publishDate 2024
dc.date.none.fl_str_mv 2024-05-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://doi.org/10.48797/sl.2024.243
https://doi.org/10.48797/sl.2024.243
url https://doi.org/10.48797/sl.2024.243
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://publicacoes.cespu.pt/index.php/sl/article/view/243
https://publicacoes.cespu.pt/index.php/sl/article/view/243/254
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv IUCS-CESPU Publishing
publisher.none.fl_str_mv IUCS-CESPU Publishing
dc.source.none.fl_str_mv Scientific Letters; Vol. 1 No. Sup 1 (2024)
2795-5117
reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron:RCAAP
instname_str FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron_str RCAAP
institution RCAAP
reponame_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
collection Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository.name.fl_str_mv Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
repository.mail.fl_str_mv info@rcaap.pt
_version_ 1833593878505062400