Characterization and expression analysis of the cytochrome bd oxidase operon from Desulfovibrio gigas
Autor(a) principal: | |
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Data de Publicação: | 2006 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
Texto Completo: | http://hdl.handle.net/10174/1579 |
Resumo: | Abstract: Although classified as anaerobic, Desulfovibrio gigas contains a functional canonical membrane respiratory chain, including a cytochrome bd quinol oxidase as its terminal element. In the present study, we report the identification of the operon cydAB encoding the two subunits of cytochrome bd from this bacterium. Two hypothetical promoter regions and sequences resembling transcriptional regulators-binding sites have been identified. Amino acid sequence analysis revealed a high similarity to cytochrome bd from other organisms, presenting the conserved residues typical from these proteins. Reverse transcription polymerase chain reaction (RT-PCR) and Northern blot analysis confirmed the operon transcription. Gene expression was assessed by real-time RT-PCR in cells grown in different media and under exposure to oxygen and nitric oxide. mRNA levels were slightly enhanced in the presence of 150 mu M NO. However, in the presence of 10 mu M NO, a decrease was observed of the steady-state population of cydAB mRNA. No considerable effect was observed in the presence of fumarate/sulfate medium, 60 mu M O-2 or 10 mu M NO. |
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Characterization and expression analysis of the cytochrome bd oxidase operon from Desulfovibrio gigasDesulfovibrio gigascytochrome bd oxidaseAbstract: Although classified as anaerobic, Desulfovibrio gigas contains a functional canonical membrane respiratory chain, including a cytochrome bd quinol oxidase as its terminal element. In the present study, we report the identification of the operon cydAB encoding the two subunits of cytochrome bd from this bacterium. Two hypothetical promoter regions and sequences resembling transcriptional regulators-binding sites have been identified. Amino acid sequence analysis revealed a high similarity to cytochrome bd from other organisms, presenting the conserved residues typical from these proteins. Reverse transcription polymerase chain reaction (RT-PCR) and Northern blot analysis confirmed the operon transcription. Gene expression was assessed by real-time RT-PCR in cells grown in different media and under exposure to oxygen and nitric oxide. mRNA levels were slightly enhanced in the presence of 150 mu M NO. However, in the presence of 10 mu M NO, a decrease was observed of the steady-state population of cydAB mRNA. No considerable effect was observed in the presence of fumarate/sulfate medium, 60 mu M O-2 or 10 mu M NO.2009-04-15T15:43:40Z2009-04-152006-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article35775 bytesapplication/pdfhttp://hdl.handle.net/10174/1579http://hdl.handle.net/10174/1579engpag 274-281CURRENT MICROBIOLOGY452livrendndndndnd226Machado, PatríciaFélix, RuteRodrigues, RuteOliveira, SolangeRodrigues-Pousada, Claudinainfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2024-01-03T18:37:17Zoai:dspace.uevora.pt:10174/1579Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T11:50:07.651776Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse |
dc.title.none.fl_str_mv |
Characterization and expression analysis of the cytochrome bd oxidase operon from Desulfovibrio gigas |
title |
Characterization and expression analysis of the cytochrome bd oxidase operon from Desulfovibrio gigas |
spellingShingle |
Characterization and expression analysis of the cytochrome bd oxidase operon from Desulfovibrio gigas Machado, Patrícia Desulfovibrio gigas cytochrome bd oxidase |
title_short |
Characterization and expression analysis of the cytochrome bd oxidase operon from Desulfovibrio gigas |
title_full |
Characterization and expression analysis of the cytochrome bd oxidase operon from Desulfovibrio gigas |
title_fullStr |
Characterization and expression analysis of the cytochrome bd oxidase operon from Desulfovibrio gigas |
title_full_unstemmed |
Characterization and expression analysis of the cytochrome bd oxidase operon from Desulfovibrio gigas |
title_sort |
Characterization and expression analysis of the cytochrome bd oxidase operon from Desulfovibrio gigas |
author |
Machado, Patrícia |
author_facet |
Machado, Patrícia Félix, Rute Rodrigues, Rute Oliveira, Solange Rodrigues-Pousada, Claudina |
author_role |
author |
author2 |
Félix, Rute Rodrigues, Rute Oliveira, Solange Rodrigues-Pousada, Claudina |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Machado, Patrícia Félix, Rute Rodrigues, Rute Oliveira, Solange Rodrigues-Pousada, Claudina |
dc.subject.por.fl_str_mv |
Desulfovibrio gigas cytochrome bd oxidase |
topic |
Desulfovibrio gigas cytochrome bd oxidase |
description |
Abstract: Although classified as anaerobic, Desulfovibrio gigas contains a functional canonical membrane respiratory chain, including a cytochrome bd quinol oxidase as its terminal element. In the present study, we report the identification of the operon cydAB encoding the two subunits of cytochrome bd from this bacterium. Two hypothetical promoter regions and sequences resembling transcriptional regulators-binding sites have been identified. Amino acid sequence analysis revealed a high similarity to cytochrome bd from other organisms, presenting the conserved residues typical from these proteins. Reverse transcription polymerase chain reaction (RT-PCR) and Northern blot analysis confirmed the operon transcription. Gene expression was assessed by real-time RT-PCR in cells grown in different media and under exposure to oxygen and nitric oxide. mRNA levels were slightly enhanced in the presence of 150 mu M NO. However, in the presence of 10 mu M NO, a decrease was observed of the steady-state population of cydAB mRNA. No considerable effect was observed in the presence of fumarate/sulfate medium, 60 mu M O-2 or 10 mu M NO. |
publishDate |
2006 |
dc.date.none.fl_str_mv |
2006-01-01T00:00:00Z 2009-04-15T15:43:40Z 2009-04-15 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10174/1579 http://hdl.handle.net/10174/1579 |
url |
http://hdl.handle.net/10174/1579 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
pag 274-281 CURRENT MICROBIOLOGY 4 52 livre nd nd nd nd nd 226 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
35775 bytes application/pdf |
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Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) |
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Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia |
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