Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge

Bibliographic Details
Main Author: Ludwig, Adriana
Publication Date: 2021
Other Authors: Schemberger, Michelle Orane, Gazolla, Camilla Borges, Gama, Joana de Moura, Duarte, Iraine, Lopes, Ana Luisa Kalb, Mathias, Carolina, Petters‑vandresen, Desirrê Alexia Lourenço, Zattera, Michelle Louise, Bruschi, Daniel Pacheco
Format: Article
Language: por
Source: Repositório Institucional da FIOCRUZ (ARCA)
Download full: https://arca.fiocruz.br/handle/icict/51346
Summary: Fundação Oswaldo Cruz. Instituto Carlos Chagas. Laboratório de Ciências e Tecnologias Aplicadas em Saúde. Curitiba, PR, Brasil.
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spelling Ludwig, AdrianaSchemberger, Michelle OraneGazolla, Camilla BorgesGama, Joana de MouraDuarte, IraineLopes, Ana Luisa KalbMathias, CarolinaPetters‑vandresen, Desirrê Alexia LourençoZattera, Michelle LouiseBruschi, Daniel Pacheco2022-02-21T18:36:04Z2022-02-21T18:36:04Z2021LUDWIG, Adriana et al. Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge. Genetica, n. 149, p. 335–342, 2021.1573-6857https://arca.fiocruz.br/handle/icict/513461573-6857porSpringerRNA-seqRetrotransposonsRhinella marinaTranscriptomeRetroelementsAdaptationTranscriptomaAdaptaciónTranscriptomeRétroélémentsTranscriptomaRetroelementosAdaptaçãoTransposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challengeinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleFundação Oswaldo Cruz. Instituto Carlos Chagas. Laboratório de Ciências e Tecnologias Aplicadas em Saúde. Curitiba, PR, Brasil.Universidade Estadual de Ponta Grossa. Departamento de Fitotecnia e Fitossanidade. Laboratório de Biotecnologia Aplicada a Fruticultura. Ponta Grossa, PR, Brasil.Universidade Federal do Paraná. Programa de Pós-Graduação em Genética. Curitiba, PR, Brasil.Universidade Federal do Paraná. Programa de Pós-Graduação em Genética. Curitiba, PR, Brasil.Universidade Federal do Paraná. Programa de Pós-Graduação em Genética. Curitiba, PR, Brasil.Fundação Oswaldo Cruz. Instituto Carlos Chagas. Laboratório de Ciências e Tecnologias Aplicadas em Saúde. Curitiba, PR, Brasil. / Universidade Federal do Paraná. Programa de Pós-Graduação em Biologia Celular e Molecular. Curitiba, PR, Brasil.Universidade Federal do Paraná. Programa de Pós-Graduação em Genética. Curitiba, PR, Brasil.Universidade Federal do Paraná. Programa de Pós-Graduação em Genética. Curitiba, PR, Brasil.Universidade Federal do Paraná. Programa de Pós-Graduação em Genética. Curitiba, PR, Brasil.Universidade Federal do Paraná. Programa de Pós-Graduação em Genética. Curitiba, PR, Brasil. / Universidade Federal do Paraná. Departamento de Genética. Laboratório de Citogenética Evolutiva e Conservação Animal, Curitiba, PR, Brasil.Transposable elements (TEs) are important components of eukaryotic genomes and compose around 30% of the genome of Rhinella marina, an invasive toad species. Considering the possible role of TEs in the adaptation of populations, we have analyzed the expression of TEs in publicly available spleen tissue transcriptomic data generated for this species after immune and stress challenge. By analyzing the transcriptome assembly, we detected a high number of TE segments. Moreover, some distinct TE families were diferentially expressed in some conditions. Our result shows that several TEs are capable of being transcribed in R. marina and they could help to generate a rapid response of specimens to the environment. Also, we can suggest that these TEs could be activated in the germinative cells as well producing variability to be selected and shaped by the evolutionary processes behind the success of this invasive species. Thus, the TEs are important targets for investigation in the context of R. marina adaptation.info:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-83084https://arca.fiocruz.br/bitstreams/8a0ad8dc-8458-47e7-bf36-ebe876d79e96/download783568c2893d2e25a99990b126be1772MD51falseAnonymousREADORIGINALLudwig2021_Article_TransposableOK.pdfLudwig2021_Article_TransposableOK.pdfapplication/pdf1452912https://arca.fiocruz.br/bitstreams/ff21ccf7-78ec-4c72-995a-2c819a47873b/download709f60058fdf79f045926a3e3858339eMD52trueAnonymousREADTEXTLudwig2021_Article_TransposableOK.pdf.txtLudwig2021_Article_TransposableOK.pdf.txtExtracted texttext/plain41525https://arca.fiocruz.br/bitstreams/aff53772-800f-4151-9ab3-dcb6c725eae4/download80de6c59c744b2b91fcf81e28c2cbc41MD55falseAnonymousREADTHUMBNAILLudwig2021_Article_TransposableOK.pdf.jpgLudwig2021_Article_TransposableOK.pdf.jpgGenerated Thumbnailimage/jpeg5794https://arca.fiocruz.br/bitstreams/951fa41b-2db3-4755-a068-9d6761683281/download69025df266a4cff9e87eb45d2563c0b8MD56falseAnonymousREADicict/513462025-07-30 02:10:09.891open.accessoai:arca.fiocruz.br:icict/51346https://arca.fiocruz.brRepositório InstitucionalPUBhttps://www.arca.fiocruz.br/oai/requestrepositorio.arca@fiocruz.bropendoar:21352025-07-30T05:10:09Repositório Institucional da FIOCRUZ (ARCA) - 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dc.title.none.fl_str_mv Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge
title Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge
spellingShingle Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge
Ludwig, Adriana
RNA-seq
Retrotransposons
Rhinella marina
Transcriptome
Retroelements
Adaptation
Transcriptoma
Adaptación
Transcriptome
Rétroéléments
Transcriptoma
Retroelementos
Adaptação
title_short Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge
title_full Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge
title_fullStr Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge
title_full_unstemmed Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge
title_sort Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge
author Ludwig, Adriana
author_facet Ludwig, Adriana
Schemberger, Michelle Orane
Gazolla, Camilla Borges
Gama, Joana de Moura
Duarte, Iraine
Lopes, Ana Luisa Kalb
Mathias, Carolina
Petters‑vandresen, Desirrê Alexia Lourenço
Zattera, Michelle Louise
Bruschi, Daniel Pacheco
author_role author
author2 Schemberger, Michelle Orane
Gazolla, Camilla Borges
Gama, Joana de Moura
Duarte, Iraine
Lopes, Ana Luisa Kalb
Mathias, Carolina
Petters‑vandresen, Desirrê Alexia Lourenço
Zattera, Michelle Louise
Bruschi, Daniel Pacheco
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Ludwig, Adriana
Schemberger, Michelle Orane
Gazolla, Camilla Borges
Gama, Joana de Moura
Duarte, Iraine
Lopes, Ana Luisa Kalb
Mathias, Carolina
Petters‑vandresen, Desirrê Alexia Lourenço
Zattera, Michelle Louise
Bruschi, Daniel Pacheco
dc.subject.other.none.fl_str_mv RNA-seq
Retrotransposons
Rhinella marina
topic RNA-seq
Retrotransposons
Rhinella marina
Transcriptome
Retroelements
Adaptation
Transcriptoma
Adaptación
Transcriptome
Rétroéléments
Transcriptoma
Retroelementos
Adaptação
dc.subject.en.none.fl_str_mv Transcriptome
Retroelements
Adaptation
dc.subject.es.none.fl_str_mv Transcriptoma
Adaptación
dc.subject.fr.none.fl_str_mv Transcriptome
Rétroéléments
dc.subject.decs.none.fl_str_mv Transcriptoma
Retroelementos
Adaptação
description Fundação Oswaldo Cruz. Instituto Carlos Chagas. Laboratório de Ciências e Tecnologias Aplicadas em Saúde. Curitiba, PR, Brasil.
publishDate 2021
dc.date.issued.fl_str_mv 2021
dc.date.accessioned.fl_str_mv 2022-02-21T18:36:04Z
dc.date.available.fl_str_mv 2022-02-21T18:36:04Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv LUDWIG, Adriana et al. Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge. Genetica, n. 149, p. 335–342, 2021.
dc.identifier.uri.fl_str_mv https://arca.fiocruz.br/handle/icict/51346
dc.identifier.issn.none.fl_str_mv 1573-6857
dc.identifier.eissn.none.fl_str_mv 1573-6857
identifier_str_mv LUDWIG, Adriana et al. Transposable elements expression in Rhinella marina (cane toad) specimens submitted to immune and stress challenge. Genetica, n. 149, p. 335–342, 2021.
1573-6857
url https://arca.fiocruz.br/handle/icict/51346
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Springer
publisher.none.fl_str_mv Springer
dc.source.none.fl_str_mv reponame:Repositório Institucional da FIOCRUZ (ARCA)
instname:Fundação Oswaldo Cruz (FIOCRUZ)
instacron:FIOCRUZ
instname_str Fundação Oswaldo Cruz (FIOCRUZ)
instacron_str FIOCRUZ
institution FIOCRUZ
reponame_str Repositório Institucional da FIOCRUZ (ARCA)
collection Repositório Institucional da FIOCRUZ (ARCA)
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