Transport of DNA repair proteins to the cell nucleus by the classical nuclear importin pathway – a structural overview

Detalhes bibliográficos
Autor(a) principal: Fontes, Marcos R.M. [UNESP]
Data de Publicação: 2025
Outros Autores: Cardoso, Fábio F. [UNESP], Kobe, Bostjan
Tipo de documento: Outros
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.dnarep.2025.103828
https://hdl.handle.net/11449/300146
Resumo: DNA repair is a crucial biological process necessary to address damage caused by both endogenous and exogenous agents, with at least five major pathways recognized as central to this process. In several cancer types and other diseases, including neurodegenerative disorders, DNA repair mechanisms are often disrupted or dysregulated. Despite the diversity of these proteins and their roles, they all share the common requirement of being imported into the cell nucleus to perform their functions. Therefore, understanding the nuclear import of these proteins is essential for comprehending their roles in cellular processes. The first and best-characterized nuclear targeting signal is the classical nuclear localization sequence (NLS), recognized by importin-α (Impα). Several structural and affinity studies have been conducted on complexes formed between Impα and NLSs from DNA repair proteins, although these represent only a fraction of all known DNA repair proteins. These studies have significantly advanced our understanding of the nuclear import process of DNA repair proteins, often revealing unexpected results that challenge existing literature and computational predictions. Despite advances in computational, biochemical, and cellular assays, structural methods – particularly crystallography and in-solution biophysical approaches – continue to play a critical role in providing insights into molecular events operating in biological pathways. In this review, we aim to summarize experimental structural and affinity studies involving Impα and NLSs from DNA repair proteins, with the goal of furthering our understanding of the function of these essential proteins.
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spelling Transport of DNA repair proteins to the cell nucleus by the classical nuclear importin pathway – a structural overviewAffinity assaysDNA repair proteinsImportin-alphaNuclear localization signal (NLS)X-ray crystallographyDNA repair is a crucial biological process necessary to address damage caused by both endogenous and exogenous agents, with at least five major pathways recognized as central to this process. In several cancer types and other diseases, including neurodegenerative disorders, DNA repair mechanisms are often disrupted or dysregulated. Despite the diversity of these proteins and their roles, they all share the common requirement of being imported into the cell nucleus to perform their functions. Therefore, understanding the nuclear import of these proteins is essential for comprehending their roles in cellular processes. The first and best-characterized nuclear targeting signal is the classical nuclear localization sequence (NLS), recognized by importin-α (Impα). Several structural and affinity studies have been conducted on complexes formed between Impα and NLSs from DNA repair proteins, although these represent only a fraction of all known DNA repair proteins. These studies have significantly advanced our understanding of the nuclear import process of DNA repair proteins, often revealing unexpected results that challenge existing literature and computational predictions. Despite advances in computational, biochemical, and cellular assays, structural methods – particularly crystallography and in-solution biophysical approaches – continue to play a critical role in providing insights into molecular events operating in biological pathways. In this review, we aim to summarize experimental structural and affinity studies involving Impα and NLSs from DNA repair proteins, with the goal of furthering our understanding of the function of these essential proteins.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)National Health and Medical Research CouncilConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Australian Research CouncilDepartamento de Biofísica e Farmacologia Instituto de Biociências Universidade Estadual Paulista (UNESP), SPInstituto de Estudos Avançados do Mar (IEAMar) Universidade Estadual Paulista (UNESP), SPSchool of Chemistry and Molecular Biosciences University of QueenslandAustralian Infectious Diseases Research Centre University of QueenslandInstitute for Molecular Bioscience University of QueenslandDepartamento de Biofísica e Farmacologia Instituto de Biociências Universidade Estadual Paulista (UNESP), SPInstituto de Estudos Avançados do Mar (IEAMar) Universidade Estadual Paulista (UNESP), SPFAPESP: 2009/14118-8FAPESP: 2015/25143-4FAPESP: 2019/05958-4FAPESP: 2021/01463-0National Health and Medical Research Council: 2025931CNPq: 302643/2021-4Australian Research Council: FL180100109Universidade Estadual Paulista (UNESP)University of QueenslandFontes, Marcos R.M. [UNESP]Cardoso, Fábio F. [UNESP]Kobe, Bostjan2025-04-29T18:48:43Z2025-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/otherhttp://dx.doi.org/10.1016/j.dnarep.2025.103828DNA Repair, v. 149.1568-78561568-7864https://hdl.handle.net/11449/30014610.1016/j.dnarep.2025.1038282-s2.0-105001037257Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengDNA Repairinfo:eu-repo/semantics/openAccess2025-04-30T13:41:49Zoai:repositorio.unesp.br:11449/300146Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462025-04-30T13:41:49Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Transport of DNA repair proteins to the cell nucleus by the classical nuclear importin pathway – a structural overview
title Transport of DNA repair proteins to the cell nucleus by the classical nuclear importin pathway – a structural overview
spellingShingle Transport of DNA repair proteins to the cell nucleus by the classical nuclear importin pathway – a structural overview
Fontes, Marcos R.M. [UNESP]
Affinity assays
DNA repair proteins
Importin-alpha
Nuclear localization signal (NLS)
X-ray crystallography
title_short Transport of DNA repair proteins to the cell nucleus by the classical nuclear importin pathway – a structural overview
title_full Transport of DNA repair proteins to the cell nucleus by the classical nuclear importin pathway – a structural overview
title_fullStr Transport of DNA repair proteins to the cell nucleus by the classical nuclear importin pathway – a structural overview
title_full_unstemmed Transport of DNA repair proteins to the cell nucleus by the classical nuclear importin pathway – a structural overview
title_sort Transport of DNA repair proteins to the cell nucleus by the classical nuclear importin pathway – a structural overview
author Fontes, Marcos R.M. [UNESP]
author_facet Fontes, Marcos R.M. [UNESP]
Cardoso, Fábio F. [UNESP]
Kobe, Bostjan
author_role author
author2 Cardoso, Fábio F. [UNESP]
Kobe, Bostjan
author2_role author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
University of Queensland
dc.contributor.author.fl_str_mv Fontes, Marcos R.M. [UNESP]
Cardoso, Fábio F. [UNESP]
Kobe, Bostjan
dc.subject.por.fl_str_mv Affinity assays
DNA repair proteins
Importin-alpha
Nuclear localization signal (NLS)
X-ray crystallography
topic Affinity assays
DNA repair proteins
Importin-alpha
Nuclear localization signal (NLS)
X-ray crystallography
description DNA repair is a crucial biological process necessary to address damage caused by both endogenous and exogenous agents, with at least five major pathways recognized as central to this process. In several cancer types and other diseases, including neurodegenerative disorders, DNA repair mechanisms are often disrupted or dysregulated. Despite the diversity of these proteins and their roles, they all share the common requirement of being imported into the cell nucleus to perform their functions. Therefore, understanding the nuclear import of these proteins is essential for comprehending their roles in cellular processes. The first and best-characterized nuclear targeting signal is the classical nuclear localization sequence (NLS), recognized by importin-α (Impα). Several structural and affinity studies have been conducted on complexes formed between Impα and NLSs from DNA repair proteins, although these represent only a fraction of all known DNA repair proteins. These studies have significantly advanced our understanding of the nuclear import process of DNA repair proteins, often revealing unexpected results that challenge existing literature and computational predictions. Despite advances in computational, biochemical, and cellular assays, structural methods – particularly crystallography and in-solution biophysical approaches – continue to play a critical role in providing insights into molecular events operating in biological pathways. In this review, we aim to summarize experimental structural and affinity studies involving Impα and NLSs from DNA repair proteins, with the goal of furthering our understanding of the function of these essential proteins.
publishDate 2025
dc.date.none.fl_str_mv 2025-04-29T18:48:43Z
2025-05-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/other
format other
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.dnarep.2025.103828
DNA Repair, v. 149.
1568-7856
1568-7864
https://hdl.handle.net/11449/300146
10.1016/j.dnarep.2025.103828
2-s2.0-105001037257
url http://dx.doi.org/10.1016/j.dnarep.2025.103828
https://hdl.handle.net/11449/300146
identifier_str_mv DNA Repair, v. 149.
1568-7856
1568-7864
10.1016/j.dnarep.2025.103828
2-s2.0-105001037257
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv DNA Repair
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
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