Robust deep learning for eye fundus images: Bridging real and synthetic data for enhancing generalization

Bibliographic Details
Main Author: Oliveira, Guilherme C. [UNESP]
Publication Date: 2024
Other Authors: Rosa, Gustavo H. [UNESP], Pedronette, Daniel C.G. [UNESP], Papa, João P. [UNESP], Kumar, Himeesh, Passos, Leandro A. [UNESP], Kumar, Dinesh
Format: Article
Language: eng
Source: Repositório Institucional da UNESP
Download full: http://dx.doi.org/10.1016/j.bspc.2024.106263
https://hdl.handle.net/11449/304275
Summary: Deep learning applications for assessing medical images are limited because the datasets are often small and imbalanced. The use of synthetic data has been proposed in the literature, but neither a robust comparison of the different methods nor generalizability has been reported. Our approach integrates a retinal image quality assessment model and StyleGAN2 architecture to enhance Age-related Macular Degeneration (AMD) detection capabilities and improve generalizability. This work compares ten different Generative Adversarial Network (GAN) architectures to generate synthetic eye-fundus images with and without AMD. We combined subsets of three public databases (iChallenge-AMD, ODIR-2019, and RIADD) to form a single training and test set. We employed the STARE dataset for external validation, ensuring a comprehensive assessment of the proposed approach. The results show that StyleGAN2 reached the lowest Fréchet Inception Distance (166.17), and clinicians could not accurately differentiate between real and synthetic images. ResNet-18 architecture obtained the best performance with 85% accuracy and outperformed the two human experts (80% and 75%) in detecting AMD fundus images. The accuracy rates were 82.8% for the test set and 81.3% for the STARE dataset, demonstrating the model's generalizability. The proposed methodology for synthetic medical image generation has been validated for robustness and accuracy, with free access to its code for further research and development in this field.
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spelling Robust deep learning for eye fundus images: Bridging real and synthetic data for enhancing generalizationAge-related macular degenerationData augmentationDeep learningGenerative Adversarial NetworksMedical imagesStyleGAN2Deep learning applications for assessing medical images are limited because the datasets are often small and imbalanced. The use of synthetic data has been proposed in the literature, but neither a robust comparison of the different methods nor generalizability has been reported. Our approach integrates a retinal image quality assessment model and StyleGAN2 architecture to enhance Age-related Macular Degeneration (AMD) detection capabilities and improve generalizability. This work compares ten different Generative Adversarial Network (GAN) architectures to generate synthetic eye-fundus images with and without AMD. We combined subsets of three public databases (iChallenge-AMD, ODIR-2019, and RIADD) to form a single training and test set. We employed the STARE dataset for external validation, ensuring a comprehensive assessment of the proposed approach. The results show that StyleGAN2 reached the lowest Fréchet Inception Distance (166.17), and clinicians could not accurately differentiate between real and synthetic images. ResNet-18 architecture obtained the best performance with 85% accuracy and outperformed the two human experts (80% and 75%) in detecting AMD fundus images. The accuracy rates were 82.8% for the test set and 81.3% for the STARE dataset, demonstrating the model's generalizability. The proposed methodology for synthetic medical image generation has been validated for robustness and accuracy, with free access to its code for further research and development in this field.Department of Biotechnology, Ministry of Science and Technology, IndiaFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Stiftelsen PromobiliaEngineering and Physical Sciences Research CouncilSchool of Sciences São Paulo State UniversitySchool of Engineering Royal Melbourne Institute of TechnologyCentre of Eye Research University of MelbourneSchool of Sciences São Paulo State UniversityFAPESP: #2013/07375-0FAPESP: #2014/12236-1FAPESP: #2018/15597-6FAPESP: #2019/00585-5FAPESP: #2019/02205-5FAPESP: #2019/07665-4FAPESP: #2023/10823-6CNPq: #307066/2017-7CNPq: #309439/2020-5CNPq: #427968/2018-6CNPq: #88887.606573/2021-00Stiftelsen Promobilia: 2019Engineering and Physical Sciences Research Council: EP/T021063/1Stiftelsen Promobilia: P-134Universidade Estadual Paulista (UNESP)Royal Melbourne Institute of TechnologyUniversity of MelbourneOliveira, Guilherme C. [UNESP]Rosa, Gustavo H. [UNESP]Pedronette, Daniel C.G. [UNESP]Papa, João P. [UNESP]Kumar, HimeeshPassos, Leandro A. [UNESP]Kumar, Dinesh2025-04-29T19:34:27Z2024-08-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.bspc.2024.106263Biomedical Signal Processing and Control, v. 94.1746-81081746-8094https://hdl.handle.net/11449/30427510.1016/j.bspc.2024.1062632-s2.0-85189663195Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBiomedical Signal Processing and Controlinfo:eu-repo/semantics/openAccess2025-04-30T13:52:55Zoai:repositorio.unesp.br:11449/304275Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462025-04-30T13:52:55Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Robust deep learning for eye fundus images: Bridging real and synthetic data for enhancing generalization
title Robust deep learning for eye fundus images: Bridging real and synthetic data for enhancing generalization
spellingShingle Robust deep learning for eye fundus images: Bridging real and synthetic data for enhancing generalization
Oliveira, Guilherme C. [UNESP]
Age-related macular degeneration
Data augmentation
Deep learning
Generative Adversarial Networks
Medical images
StyleGAN2
title_short Robust deep learning for eye fundus images: Bridging real and synthetic data for enhancing generalization
title_full Robust deep learning for eye fundus images: Bridging real and synthetic data for enhancing generalization
title_fullStr Robust deep learning for eye fundus images: Bridging real and synthetic data for enhancing generalization
title_full_unstemmed Robust deep learning for eye fundus images: Bridging real and synthetic data for enhancing generalization
title_sort Robust deep learning for eye fundus images: Bridging real and synthetic data for enhancing generalization
author Oliveira, Guilherme C. [UNESP]
author_facet Oliveira, Guilherme C. [UNESP]
Rosa, Gustavo H. [UNESP]
Pedronette, Daniel C.G. [UNESP]
Papa, João P. [UNESP]
Kumar, Himeesh
Passos, Leandro A. [UNESP]
Kumar, Dinesh
author_role author
author2 Rosa, Gustavo H. [UNESP]
Pedronette, Daniel C.G. [UNESP]
Papa, João P. [UNESP]
Kumar, Himeesh
Passos, Leandro A. [UNESP]
Kumar, Dinesh
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
Royal Melbourne Institute of Technology
University of Melbourne
dc.contributor.author.fl_str_mv Oliveira, Guilherme C. [UNESP]
Rosa, Gustavo H. [UNESP]
Pedronette, Daniel C.G. [UNESP]
Papa, João P. [UNESP]
Kumar, Himeesh
Passos, Leandro A. [UNESP]
Kumar, Dinesh
dc.subject.por.fl_str_mv Age-related macular degeneration
Data augmentation
Deep learning
Generative Adversarial Networks
Medical images
StyleGAN2
topic Age-related macular degeneration
Data augmentation
Deep learning
Generative Adversarial Networks
Medical images
StyleGAN2
description Deep learning applications for assessing medical images are limited because the datasets are often small and imbalanced. The use of synthetic data has been proposed in the literature, but neither a robust comparison of the different methods nor generalizability has been reported. Our approach integrates a retinal image quality assessment model and StyleGAN2 architecture to enhance Age-related Macular Degeneration (AMD) detection capabilities and improve generalizability. This work compares ten different Generative Adversarial Network (GAN) architectures to generate synthetic eye-fundus images with and without AMD. We combined subsets of three public databases (iChallenge-AMD, ODIR-2019, and RIADD) to form a single training and test set. We employed the STARE dataset for external validation, ensuring a comprehensive assessment of the proposed approach. The results show that StyleGAN2 reached the lowest Fréchet Inception Distance (166.17), and clinicians could not accurately differentiate between real and synthetic images. ResNet-18 architecture obtained the best performance with 85% accuracy and outperformed the two human experts (80% and 75%) in detecting AMD fundus images. The accuracy rates were 82.8% for the test set and 81.3% for the STARE dataset, demonstrating the model's generalizability. The proposed methodology for synthetic medical image generation has been validated for robustness and accuracy, with free access to its code for further research and development in this field.
publishDate 2024
dc.date.none.fl_str_mv 2024-08-01
2025-04-29T19:34:27Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.bspc.2024.106263
Biomedical Signal Processing and Control, v. 94.
1746-8108
1746-8094
https://hdl.handle.net/11449/304275
10.1016/j.bspc.2024.106263
2-s2.0-85189663195
url http://dx.doi.org/10.1016/j.bspc.2024.106263
https://hdl.handle.net/11449/304275
identifier_str_mv Biomedical Signal Processing and Control, v. 94.
1746-8108
1746-8094
10.1016/j.bspc.2024.106263
2-s2.0-85189663195
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Biomedical Signal Processing and Control
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
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