Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis.
| Autor(a) principal: | |
|---|---|
| Data de Publicação: | 2024 |
| Outros Autores: | , , , , , , |
| Tipo de documento: | Artigo |
| Idioma: | eng |
| Título da fonte: | Repositório Institucional da UFOP |
| dARK ID: | ark:/61566/001300000jr1b |
| Texto Completo: | https://www.repositorio.ufop.br/handle/123456789/19701 https://doi.org/10.1590/1678-4685-GMB-2023-0265 |
Resumo: | Bladder cancer is the tenth most frequently diagnosed cancer globally. Classification of high- or low-grade tumors is based on cytological differentiation and is an important prognostic factor. LncRNAs regulate gene expression and play critical roles in the occurrence and development of cancer, however, there are few reports on their diagnostic value and co-expression levels with genes, which may be useful as specific biomarkers for prognosis and therapy in bladder cancer. Thus, we performed a marker lesion study to investigate whether gene/lncRNA expression in urothelial carcinoma tissues may be useful in differentiating low-grade and high-grade tumors. RT-qPCR was used to evaluate the expression of the JHDM1D gene and the lncRNAs CTD-2132N18.2, SBF2-AS1, RP11-977B10.2, CTD-2510F5.4, and RP11-363E7.4 in 20 histologically diagnosed high-grade and 10 low-grade tumors. A protein-to-protein interaction network between genes associated with JHDM1D gene was constructed using STRING website. The results showed a moderate (positive) correlation between CTD-2510F5.4 and CTD2132N18.2. ROC curve analyses showed that combined JHDM1D and RP11-363E7.4 predicted tumor grade with an AUC of 0.826, showing excellent accuracy. In conclusion, the results indicated that the combined expression of JHDM1D and RP11-363E7.4 may be a prognostic biomarker and a promising target for urothelial tumor therapy. |
| id |
UFOP_c272c56dbc2da4980aaa4b4647ca42fc |
|---|---|
| oai_identifier_str |
oai:repositorio.ufop.br:123456789/19701 |
| network_acronym_str |
UFOP |
| network_name_str |
Repositório Institucional da UFOP |
| repository_id_str |
3233 |
| spelling |
Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis.Biomarker-oriented therapyCancer progressionTumor biomarkerGene/lncRNA differential expressionUrothelial carcinomaBladder cancer is the tenth most frequently diagnosed cancer globally. Classification of high- or low-grade tumors is based on cytological differentiation and is an important prognostic factor. LncRNAs regulate gene expression and play critical roles in the occurrence and development of cancer, however, there are few reports on their diagnostic value and co-expression levels with genes, which may be useful as specific biomarkers for prognosis and therapy in bladder cancer. Thus, we performed a marker lesion study to investigate whether gene/lncRNA expression in urothelial carcinoma tissues may be useful in differentiating low-grade and high-grade tumors. RT-qPCR was used to evaluate the expression of the JHDM1D gene and the lncRNAs CTD-2132N18.2, SBF2-AS1, RP11-977B10.2, CTD-2510F5.4, and RP11-363E7.4 in 20 histologically diagnosed high-grade and 10 low-grade tumors. A protein-to-protein interaction network between genes associated with JHDM1D gene was constructed using STRING website. The results showed a moderate (positive) correlation between CTD-2510F5.4 and CTD2132N18.2. ROC curve analyses showed that combined JHDM1D and RP11-363E7.4 predicted tumor grade with an AUC of 0.826, showing excellent accuracy. In conclusion, the results indicated that the combined expression of JHDM1D and RP11-363E7.4 may be a prognostic biomarker and a promising target for urothelial tumor therapy.2025-02-05T17:32:18Z2025-02-05T17:32:18Z2024info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfSILVA, G. N. da et al. Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis. Genetics And Molecular Biology, v. 47, n. 3, artigo e20230265, 2024. Disponível em: <https://www.scielo.br/j/gmb/a/7T5vYwR8rxXVpcpPkcPXfjH/?lang=en>. Acesso em: 07 jan. 2025.1678-4685https://www.repositorio.ufop.br/handle/123456789/19701https://doi.org/10.1590/1678-4685-GMB-2023-0265ark:/61566/001300000jr1bThis is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited. Fonte: PDF do artigo.info:eu-repo/semantics/openAccessSilva, Glenda Nicioli daPereira, Isadora Oliveira AnsaloniLima, Ana Paula BragaAlmeida, Tamires CunhaSávio, André Luiz VenturaCosta, Renato PradoLeite, Katia Ramos MoreiraSalvadori, Daisy Maria Fáveroengreponame:Repositório Institucional da UFOPinstname:Universidade Federal de Ouro Preto (UFOP)instacron:UFOP2025-02-06T04:39:29Zoai:repositorio.ufop.br:123456789/19701Repositório InstitucionalPUBhttp://www.repositorio.ufop.br/oai/requestrepositorio@ufop.edu.bropendoar:32332025-02-06T04:39:29Repositório Institucional da UFOP - Universidade Federal de Ouro Preto (UFOP)false |
| dc.title.none.fl_str_mv |
Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis. |
| title |
Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis. |
| spellingShingle |
Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis. Silva, Glenda Nicioli da Biomarker-oriented therapy Cancer progression Tumor biomarker Gene/lncRNA differential expression Urothelial carcinoma |
| title_short |
Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis. |
| title_full |
Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis. |
| title_fullStr |
Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis. |
| title_full_unstemmed |
Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis. |
| title_sort |
Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis. |
| author |
Silva, Glenda Nicioli da |
| author_facet |
Silva, Glenda Nicioli da Pereira, Isadora Oliveira Ansaloni Lima, Ana Paula Braga Almeida, Tamires Cunha Sávio, André Luiz Ventura Costa, Renato Prado Leite, Katia Ramos Moreira Salvadori, Daisy Maria Fávero |
| author_role |
author |
| author2 |
Pereira, Isadora Oliveira Ansaloni Lima, Ana Paula Braga Almeida, Tamires Cunha Sávio, André Luiz Ventura Costa, Renato Prado Leite, Katia Ramos Moreira Salvadori, Daisy Maria Fávero |
| author2_role |
author author author author author author author |
| dc.contributor.author.fl_str_mv |
Silva, Glenda Nicioli da Pereira, Isadora Oliveira Ansaloni Lima, Ana Paula Braga Almeida, Tamires Cunha Sávio, André Luiz Ventura Costa, Renato Prado Leite, Katia Ramos Moreira Salvadori, Daisy Maria Fávero |
| dc.subject.por.fl_str_mv |
Biomarker-oriented therapy Cancer progression Tumor biomarker Gene/lncRNA differential expression Urothelial carcinoma |
| topic |
Biomarker-oriented therapy Cancer progression Tumor biomarker Gene/lncRNA differential expression Urothelial carcinoma |
| description |
Bladder cancer is the tenth most frequently diagnosed cancer globally. Classification of high- or low-grade tumors is based on cytological differentiation and is an important prognostic factor. LncRNAs regulate gene expression and play critical roles in the occurrence and development of cancer, however, there are few reports on their diagnostic value and co-expression levels with genes, which may be useful as specific biomarkers for prognosis and therapy in bladder cancer. Thus, we performed a marker lesion study to investigate whether gene/lncRNA expression in urothelial carcinoma tissues may be useful in differentiating low-grade and high-grade tumors. RT-qPCR was used to evaluate the expression of the JHDM1D gene and the lncRNAs CTD-2132N18.2, SBF2-AS1, RP11-977B10.2, CTD-2510F5.4, and RP11-363E7.4 in 20 histologically diagnosed high-grade and 10 low-grade tumors. A protein-to-protein interaction network between genes associated with JHDM1D gene was constructed using STRING website. The results showed a moderate (positive) correlation between CTD-2510F5.4 and CTD2132N18.2. ROC curve analyses showed that combined JHDM1D and RP11-363E7.4 predicted tumor grade with an AUC of 0.826, showing excellent accuracy. In conclusion, the results indicated that the combined expression of JHDM1D and RP11-363E7.4 may be a prognostic biomarker and a promising target for urothelial tumor therapy. |
| publishDate |
2024 |
| dc.date.none.fl_str_mv |
2024 2025-02-05T17:32:18Z 2025-02-05T17:32:18Z |
| dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
| format |
article |
| status_str |
publishedVersion |
| dc.identifier.uri.fl_str_mv |
SILVA, G. N. da et al. Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis. Genetics And Molecular Biology, v. 47, n. 3, artigo e20230265, 2024. Disponível em: <https://www.scielo.br/j/gmb/a/7T5vYwR8rxXVpcpPkcPXfjH/?lang=en>. Acesso em: 07 jan. 2025. 1678-4685 https://www.repositorio.ufop.br/handle/123456789/19701 https://doi.org/10.1590/1678-4685-GMB-2023-0265 |
| dc.identifier.dark.fl_str_mv |
ark:/61566/001300000jr1b |
| identifier_str_mv |
SILVA, G. N. da et al. Combined expression of JHDM1D/KDM7A gene and long non-coding RNA RP11-363E7.4 as a biomarker for urothelial cancer prognosis. Genetics And Molecular Biology, v. 47, n. 3, artigo e20230265, 2024. Disponível em: <https://www.scielo.br/j/gmb/a/7T5vYwR8rxXVpcpPkcPXfjH/?lang=en>. Acesso em: 07 jan. 2025. 1678-4685 ark:/61566/001300000jr1b |
| url |
https://www.repositorio.ufop.br/handle/123456789/19701 https://doi.org/10.1590/1678-4685-GMB-2023-0265 |
| dc.language.iso.fl_str_mv |
eng |
| language |
eng |
| dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
| eu_rights_str_mv |
openAccess |
| dc.format.none.fl_str_mv |
application/pdf |
| dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UFOP instname:Universidade Federal de Ouro Preto (UFOP) instacron:UFOP |
| instname_str |
Universidade Federal de Ouro Preto (UFOP) |
| instacron_str |
UFOP |
| institution |
UFOP |
| reponame_str |
Repositório Institucional da UFOP |
| collection |
Repositório Institucional da UFOP |
| repository.name.fl_str_mv |
Repositório Institucional da UFOP - Universidade Federal de Ouro Preto (UFOP) |
| repository.mail.fl_str_mv |
repositorio@ufop.edu.br |
| _version_ |
1846632451461349376 |