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Evaluation of VITEK 2 Compact and VITEK MS in the identification of coagulase-negative staphylococci isolated from blood cultures

Bibliographic Details
Main Author: Silva,Camila Gabriela da
Publication Date: 2017
Other Authors: Tobouti,Nina R., Zoccoli,Cássia Maria, Silveira,Alessandro Conrado O.
Format: Article
Language: eng
Source: Jornal Brasileiro de Patologia e Medicina Laboratorial (Online)
Download full: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1676-24442017000500293
Summary: ABSTRACT Introduction: In most clinical laboratories, coagulase-negative staphylococci (CNS) are classified through their biochemical characteristics using traditional and/or automated phenotypic methods. However, identification by phenotypic method is a great challenge despite the improvement in identification by automated systems in recent years. Objective: The main objective was to compare the identification of CNS between two automated methods: phenotypic (VITEK® 2 Compact, bioMérieux) and mass spectrometry (MALDI-TOF VITEK® MS, bioMérieux). Materials and method: 133 CNS isolates from whole blood samples from September 2015 to May 2016 were analyzed. Results: All the 133 isolates were identified by VITEK® 2 Compact as CNS, whereas VITEK MS did not identify seven, and there was uncertainty among three species in one isolate. The two devices had a concordance of 92.8% (117/126) of which: 56 Staphylococcus epidermidis, 34 Staphylococcus hominis ssp. hominis, 15 Staphylococcus haemolyticus, 10 Staphylococcus capitis, one Staphylococcus cohnii ssp. urealyticus and one Staphylococcus sciuri. There was disagreement in identification of S. lugdunensis and S. aureus. Conclusion: Through the analysis between the two devices and based on scientific articles comparing the methods involved in the study, it was possible to observe the great biochemical similarity among the coagulase-negative staphylococci species, this being the main limitation of the phenotypic method. The VITEK MS equipment showed high discrimination between species when compared to the gold standard method, besides being rapid and easy to use.
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spelling Evaluation of VITEK 2 Compact and VITEK MS in the identification of coagulase-negative staphylococci isolated from blood culturesmass spectrometryStaphylococcusstaphylococcal infectionsABSTRACT Introduction: In most clinical laboratories, coagulase-negative staphylococci (CNS) are classified through their biochemical characteristics using traditional and/or automated phenotypic methods. However, identification by phenotypic method is a great challenge despite the improvement in identification by automated systems in recent years. Objective: The main objective was to compare the identification of CNS between two automated methods: phenotypic (VITEK® 2 Compact, bioMérieux) and mass spectrometry (MALDI-TOF VITEK® MS, bioMérieux). Materials and method: 133 CNS isolates from whole blood samples from September 2015 to May 2016 were analyzed. Results: All the 133 isolates were identified by VITEK® 2 Compact as CNS, whereas VITEK MS did not identify seven, and there was uncertainty among three species in one isolate. The two devices had a concordance of 92.8% (117/126) of which: 56 Staphylococcus epidermidis, 34 Staphylococcus hominis ssp. hominis, 15 Staphylococcus haemolyticus, 10 Staphylococcus capitis, one Staphylococcus cohnii ssp. urealyticus and one Staphylococcus sciuri. There was disagreement in identification of S. lugdunensis and S. aureus. Conclusion: Through the analysis between the two devices and based on scientific articles comparing the methods involved in the study, it was possible to observe the great biochemical similarity among the coagulase-negative staphylococci species, this being the main limitation of the phenotypic method. The VITEK MS equipment showed high discrimination between species when compared to the gold standard method, besides being rapid and easy to use.Sociedade Brasileira de Patologia Clínica2017-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1676-24442017000500293Jornal Brasileiro de Patologia e Medicina Laboratorial v.53 n.5 2017reponame:Jornal Brasileiro de Patologia e Medicina Laboratorial (Online)instname:Sociedade Brasileira de Patologia (SBP)instacron:SBP10.5935/1676-2444.20170046info:eu-repo/semantics/openAccessSilva,Camila Gabriela daTobouti,Nina R.Zoccoli,Cássia MariaSilveira,Alessandro Conrado O.eng2017-12-14T00:00:00Zoai:scielo:S1676-24442017000500293Revistahttp://www.scielo.br/jbpmlhttps://old.scielo.br/oai/scielo-oai.php||jbpml@sbpc.org.br1678-47741676-2444opendoar:2017-12-14T00:00Jornal Brasileiro de Patologia e Medicina Laboratorial (Online) - Sociedade Brasileira de Patologia (SBP)false
dc.title.none.fl_str_mv Evaluation of VITEK 2 Compact and VITEK MS in the identification of coagulase-negative staphylococci isolated from blood cultures
title Evaluation of VITEK 2 Compact and VITEK MS in the identification of coagulase-negative staphylococci isolated from blood cultures
spellingShingle Evaluation of VITEK 2 Compact and VITEK MS in the identification of coagulase-negative staphylococci isolated from blood cultures
Silva,Camila Gabriela da
mass spectrometry
Staphylococcus
staphylococcal infections
title_short Evaluation of VITEK 2 Compact and VITEK MS in the identification of coagulase-negative staphylococci isolated from blood cultures
title_full Evaluation of VITEK 2 Compact and VITEK MS in the identification of coagulase-negative staphylococci isolated from blood cultures
title_fullStr Evaluation of VITEK 2 Compact and VITEK MS in the identification of coagulase-negative staphylococci isolated from blood cultures
title_full_unstemmed Evaluation of VITEK 2 Compact and VITEK MS in the identification of coagulase-negative staphylococci isolated from blood cultures
title_sort Evaluation of VITEK 2 Compact and VITEK MS in the identification of coagulase-negative staphylococci isolated from blood cultures
author Silva,Camila Gabriela da
author_facet Silva,Camila Gabriela da
Tobouti,Nina R.
Zoccoli,Cássia Maria
Silveira,Alessandro Conrado O.
author_role author
author2 Tobouti,Nina R.
Zoccoli,Cássia Maria
Silveira,Alessandro Conrado O.
author2_role author
author
author
dc.contributor.author.fl_str_mv Silva,Camila Gabriela da
Tobouti,Nina R.
Zoccoli,Cássia Maria
Silveira,Alessandro Conrado O.
dc.subject.por.fl_str_mv mass spectrometry
Staphylococcus
staphylococcal infections
topic mass spectrometry
Staphylococcus
staphylococcal infections
description ABSTRACT Introduction: In most clinical laboratories, coagulase-negative staphylococci (CNS) are classified through their biochemical characteristics using traditional and/or automated phenotypic methods. However, identification by phenotypic method is a great challenge despite the improvement in identification by automated systems in recent years. Objective: The main objective was to compare the identification of CNS between two automated methods: phenotypic (VITEK® 2 Compact, bioMérieux) and mass spectrometry (MALDI-TOF VITEK® MS, bioMérieux). Materials and method: 133 CNS isolates from whole blood samples from September 2015 to May 2016 were analyzed. Results: All the 133 isolates were identified by VITEK® 2 Compact as CNS, whereas VITEK MS did not identify seven, and there was uncertainty among three species in one isolate. The two devices had a concordance of 92.8% (117/126) of which: 56 Staphylococcus epidermidis, 34 Staphylococcus hominis ssp. hominis, 15 Staphylococcus haemolyticus, 10 Staphylococcus capitis, one Staphylococcus cohnii ssp. urealyticus and one Staphylococcus sciuri. There was disagreement in identification of S. lugdunensis and S. aureus. Conclusion: Through the analysis between the two devices and based on scientific articles comparing the methods involved in the study, it was possible to observe the great biochemical similarity among the coagulase-negative staphylococci species, this being the main limitation of the phenotypic method. The VITEK MS equipment showed high discrimination between species when compared to the gold standard method, besides being rapid and easy to use.
publishDate 2017
dc.date.none.fl_str_mv 2017-10-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1676-24442017000500293
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.5935/1676-2444.20170046
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv
Sociedade Brasileira de Patologia Clínica
publisher.none.fl_str_mv
Sociedade Brasileira de Patologia Clínica
dc.source.none.fl_str_mv Jornal Brasileiro de Patologia e Medicina Laboratorial v.53 n.5 2017
reponame:Jornal Brasileiro de Patologia e Medicina Laboratorial (Online)
instname:Sociedade Brasileira de Patologia (SBP)
instacron:SBP
instname_str Sociedade Brasileira de Patologia (SBP)
instacron_str SBP
institution SBP
reponame_str Jornal Brasileiro de Patologia e Medicina Laboratorial (Online)
collection Jornal Brasileiro de Patologia e Medicina Laboratorial (Online)
repository.name.fl_str_mv Jornal Brasileiro de Patologia e Medicina Laboratorial (Online) - Sociedade Brasileira de Patologia (SBP)
repository.mail.fl_str_mv ||jbpml@sbpc.org.br
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