The selection of an optimal segmentation region in physiological signals

Detalhes bibliográficos
Autor(a) principal: Oliveira, Jorge
Data de Publicação: 2022
Outros Autores: Margarida, Carvalho, Nogueira, Diogo, Coimbra, Miguel
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Texto Completo: http://hdl.handle.net/11328/4086
https://doi.org/10.1111/itor.13138
Resumo: Physiological signals are often corrupted by noisy sources. Usually, artificial intelligence algorithms analyze the whole signal, regardless of its varying quality. Instead, experienced cardiologists search for a high-quality signal segment, where more accurate conclusions can be draw. We propose a methodology that simultaneously selects the optimal processing region of a physiological signal and determines its decoding into a state sequence of physiologically meaningful events. Our approach comprises two phases. First, the training of a neural network that then enables the estimation of the state probability distribution of a signal sample. Second, the use of the neural network output within an integer program. The latter models the problem of finding a time window by maximizing a likelihood function defined by the user. Our method was tested and validated in two types of signals, the phonocardiogram and the electrocardiogram. In phonocardiogram and electrocardiogram segmentation tasks, the system’s sensitivity increased on average from 95.1% to 97.5% and from 78.9% to 83.8%, respectively, when compared to standard approaches found in the literature.
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spelling The selection of an optimal segmentation region in physiological signalsPhysiological signalsDeep neural networksInteger programmingOptimal region selectionPhysiological signals are often corrupted by noisy sources. Usually, artificial intelligence algorithms analyze the whole signal, regardless of its varying quality. Instead, experienced cardiologists search for a high-quality signal segment, where more accurate conclusions can be draw. We propose a methodology that simultaneously selects the optimal processing region of a physiological signal and determines its decoding into a state sequence of physiologically meaningful events. Our approach comprises two phases. First, the training of a neural network that then enables the estimation of the state probability distribution of a signal sample. Second, the use of the neural network output within an integer program. The latter models the problem of finding a time window by maximizing a likelihood function defined by the user. Our method was tested and validated in two types of signals, the phonocardiogram and the electrocardiogram. In phonocardiogram and electrocardiogram segmentation tasks, the system’s sensitivity increased on average from 95.1% to 97.5% and from 78.9% to 83.8%, respectively, when compared to standard approaches found in the literature.Wiley2022-05-13T08:24:44Z2022-05-132022-03-31T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfOliveira, J., Carvalho, M., Nogueira, D., & Coimbra, M. (2022). The selection of an optimal segmentation region in physiological signals. International Transactions in Operational Research, 0, 1-18. https//doi.org/10.1111/itor.13138. Repositório Institucional UPT. http://hdl.handle.net/11328/4086http://hdl.handle.net/11328/4086Oliveira, J., Carvalho, M., Nogueira, D., & Coimbra, M. (2022). The selection of an optimal segmentation region in physiological signals. International Transactions in Operational Research, 0, 1-18. https//doi.org/10.1111/itor.13138. Repositório Institucional UPT. http://hdl.handle.net/11328/4086http://hdl.handle.net/11328/4086https://doi.org/10.1111/itor.13138eng0969-6016 (Print)1475-399 (Electronic)http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1475-3995info:eu-repo/semantics/restrictedAccessinfo:eu-repo/semantics/openAccessOliveira, JorgeMargarida, CarvalhoNogueira, DiogoCoimbra, Miguelreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2025-01-09T02:18:07Zoai:repositorio.upt.pt:11328/4086Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T19:34:22.251525Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv The selection of an optimal segmentation region in physiological signals
title The selection of an optimal segmentation region in physiological signals
spellingShingle The selection of an optimal segmentation region in physiological signals
Oliveira, Jorge
Physiological signals
Deep neural networks
Integer programming
Optimal region selection
title_short The selection of an optimal segmentation region in physiological signals
title_full The selection of an optimal segmentation region in physiological signals
title_fullStr The selection of an optimal segmentation region in physiological signals
title_full_unstemmed The selection of an optimal segmentation region in physiological signals
title_sort The selection of an optimal segmentation region in physiological signals
author Oliveira, Jorge
author_facet Oliveira, Jorge
Margarida, Carvalho
Nogueira, Diogo
Coimbra, Miguel
author_role author
author2 Margarida, Carvalho
Nogueira, Diogo
Coimbra, Miguel
author2_role author
author
author
dc.contributor.author.fl_str_mv Oliveira, Jorge
Margarida, Carvalho
Nogueira, Diogo
Coimbra, Miguel
dc.subject.por.fl_str_mv Physiological signals
Deep neural networks
Integer programming
Optimal region selection
topic Physiological signals
Deep neural networks
Integer programming
Optimal region selection
description Physiological signals are often corrupted by noisy sources. Usually, artificial intelligence algorithms analyze the whole signal, regardless of its varying quality. Instead, experienced cardiologists search for a high-quality signal segment, where more accurate conclusions can be draw. We propose a methodology that simultaneously selects the optimal processing region of a physiological signal and determines its decoding into a state sequence of physiologically meaningful events. Our approach comprises two phases. First, the training of a neural network that then enables the estimation of the state probability distribution of a signal sample. Second, the use of the neural network output within an integer program. The latter models the problem of finding a time window by maximizing a likelihood function defined by the user. Our method was tested and validated in two types of signals, the phonocardiogram and the electrocardiogram. In phonocardiogram and electrocardiogram segmentation tasks, the system’s sensitivity increased on average from 95.1% to 97.5% and from 78.9% to 83.8%, respectively, when compared to standard approaches found in the literature.
publishDate 2022
dc.date.none.fl_str_mv 2022-05-13T08:24:44Z
2022-05-13
2022-03-31T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Oliveira, J., Carvalho, M., Nogueira, D., & Coimbra, M. (2022). The selection of an optimal segmentation region in physiological signals. International Transactions in Operational Research, 0, 1-18. https//doi.org/10.1111/itor.13138. Repositório Institucional UPT. http://hdl.handle.net/11328/4086
http://hdl.handle.net/11328/4086
Oliveira, J., Carvalho, M., Nogueira, D., & Coimbra, M. (2022). The selection of an optimal segmentation region in physiological signals. International Transactions in Operational Research, 0, 1-18. https//doi.org/10.1111/itor.13138. Repositório Institucional UPT. http://hdl.handle.net/11328/4086
http://hdl.handle.net/11328/4086
https://doi.org/10.1111/itor.13138
identifier_str_mv Oliveira, J., Carvalho, M., Nogueira, D., & Coimbra, M. (2022). The selection of an optimal segmentation region in physiological signals. International Transactions in Operational Research, 0, 1-18. https//doi.org/10.1111/itor.13138. Repositório Institucional UPT. http://hdl.handle.net/11328/4086
url http://hdl.handle.net/11328/4086
https://doi.org/10.1111/itor.13138
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0969-6016 (Print)
1475-399 (Electronic)
http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1475-3995
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instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
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