Genetic structure of the South European toothcarp Aphanius fasciatus (Actinopterygii: Cyprinodontidae) populations in the Mediterranean basin with a focus on the Venice lagoon

Bibliographic Details
Main Author: Cavraro, F.
Publication Date: 2017
Other Authors: Malavasi, S., Torricelli, P., Gkenas, Christos, Liousia, V., Leonardos, I., Kappas, I., Abatzopoulos, T. J., Triantafyllidis, A.
Format: Article
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/10451/41142
Summary: The genetic structure of Aphanius fasciatus populations has been analysed using two mitochondrial DNA (mtDNA) markers (16S rRNA and D-loop) obtained from specimens collected in nine sites from the Venice lagoon, Comacchio saltworks and Corsica. Available GenBank sequences were also included, in order to extend the results on a Mediterranean scale. Genetic polymorphism within the Venice lagoon was very low, with most of the specimens analysed (66% for 16S rRNA and 83% for D-loop) sharing the same haplotype for either of the two markers. The genetic homogeneity found within the Venice lagoon may be the consequence of the northward migration of southern Adriatic populations after the Last Glacial Maximum: mismatch analysis showed indeed clear signs of a rapid demographic and spatial expansion. To explain this genetic homogeneity other hypotheses were also suggested, such as adaptation to the high variability of brackish water habitats, and artificial introductions. On a Mediterranean scale, phylogenetic analyses showed the presence of five distinct geographical lineages: Aegean Sea, Greek coast of the Ionian Sea, Adriatic Sea, Tyrrhenian Sea and Southern Sicily. Analysis of molecular variance revealed a genetic partitioning mainly due to differences between groups presumably due to late Miocene geological events, while less polymorphism was present within groups and populations.
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spelling Genetic structure of the South European toothcarp Aphanius fasciatus (Actinopterygii: Cyprinodontidae) populations in the Mediterranean basin with a focus on the Venice lagoonKillifishpopulation geneticsphylogeographymtDNAcoastal lagoonsThe genetic structure of Aphanius fasciatus populations has been analysed using two mitochondrial DNA (mtDNA) markers (16S rRNA and D-loop) obtained from specimens collected in nine sites from the Venice lagoon, Comacchio saltworks and Corsica. Available GenBank sequences were also included, in order to extend the results on a Mediterranean scale. Genetic polymorphism within the Venice lagoon was very low, with most of the specimens analysed (66% for 16S rRNA and 83% for D-loop) sharing the same haplotype for either of the two markers. The genetic homogeneity found within the Venice lagoon may be the consequence of the northward migration of southern Adriatic populations after the Last Glacial Maximum: mismatch analysis showed indeed clear signs of a rapid demographic and spatial expansion. To explain this genetic homogeneity other hypotheses were also suggested, such as adaptation to the high variability of brackish water habitats, and artificial introductions. On a Mediterranean scale, phylogenetic analyses showed the presence of five distinct geographical lineages: Aegean Sea, Greek coast of the Ionian Sea, Adriatic Sea, Tyrrhenian Sea and Southern Sicily. Analysis of molecular variance revealed a genetic partitioning mainly due to differences between groups presumably due to late Miocene geological events, while less polymorphism was present within groups and populations.Taylor & Francis OpenRepositório da Universidade de LisboaCavraro, F.Malavasi, S.Torricelli, P.Gkenas, ChristosLiousia, V.Leonardos, I.Kappas, I.Abatzopoulos, T. J.Triantafyllidis, A.2020-01-19T20:07:31Z20172017-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10451/41142eng2475-026310.1080/24750263.2017.1290154info:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2025-03-17T14:10:02Zoai:repositorio.ulisboa.pt:10451/41142Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-29T03:04:32.414901Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Genetic structure of the South European toothcarp Aphanius fasciatus (Actinopterygii: Cyprinodontidae) populations in the Mediterranean basin with a focus on the Venice lagoon
title Genetic structure of the South European toothcarp Aphanius fasciatus (Actinopterygii: Cyprinodontidae) populations in the Mediterranean basin with a focus on the Venice lagoon
spellingShingle Genetic structure of the South European toothcarp Aphanius fasciatus (Actinopterygii: Cyprinodontidae) populations in the Mediterranean basin with a focus on the Venice lagoon
Cavraro, F.
Killifish
population genetics
phylogeography
mtDNA
coastal lagoons
title_short Genetic structure of the South European toothcarp Aphanius fasciatus (Actinopterygii: Cyprinodontidae) populations in the Mediterranean basin with a focus on the Venice lagoon
title_full Genetic structure of the South European toothcarp Aphanius fasciatus (Actinopterygii: Cyprinodontidae) populations in the Mediterranean basin with a focus on the Venice lagoon
title_fullStr Genetic structure of the South European toothcarp Aphanius fasciatus (Actinopterygii: Cyprinodontidae) populations in the Mediterranean basin with a focus on the Venice lagoon
title_full_unstemmed Genetic structure of the South European toothcarp Aphanius fasciatus (Actinopterygii: Cyprinodontidae) populations in the Mediterranean basin with a focus on the Venice lagoon
title_sort Genetic structure of the South European toothcarp Aphanius fasciatus (Actinopterygii: Cyprinodontidae) populations in the Mediterranean basin with a focus on the Venice lagoon
author Cavraro, F.
author_facet Cavraro, F.
Malavasi, S.
Torricelli, P.
Gkenas, Christos
Liousia, V.
Leonardos, I.
Kappas, I.
Abatzopoulos, T. J.
Triantafyllidis, A.
author_role author
author2 Malavasi, S.
Torricelli, P.
Gkenas, Christos
Liousia, V.
Leonardos, I.
Kappas, I.
Abatzopoulos, T. J.
Triantafyllidis, A.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório da Universidade de Lisboa
dc.contributor.author.fl_str_mv Cavraro, F.
Malavasi, S.
Torricelli, P.
Gkenas, Christos
Liousia, V.
Leonardos, I.
Kappas, I.
Abatzopoulos, T. J.
Triantafyllidis, A.
dc.subject.por.fl_str_mv Killifish
population genetics
phylogeography
mtDNA
coastal lagoons
topic Killifish
population genetics
phylogeography
mtDNA
coastal lagoons
description The genetic structure of Aphanius fasciatus populations has been analysed using two mitochondrial DNA (mtDNA) markers (16S rRNA and D-loop) obtained from specimens collected in nine sites from the Venice lagoon, Comacchio saltworks and Corsica. Available GenBank sequences were also included, in order to extend the results on a Mediterranean scale. Genetic polymorphism within the Venice lagoon was very low, with most of the specimens analysed (66% for 16S rRNA and 83% for D-loop) sharing the same haplotype for either of the two markers. The genetic homogeneity found within the Venice lagoon may be the consequence of the northward migration of southern Adriatic populations after the Last Glacial Maximum: mismatch analysis showed indeed clear signs of a rapid demographic and spatial expansion. To explain this genetic homogeneity other hypotheses were also suggested, such as adaptation to the high variability of brackish water habitats, and artificial introductions. On a Mediterranean scale, phylogenetic analyses showed the presence of five distinct geographical lineages: Aegean Sea, Greek coast of the Ionian Sea, Adriatic Sea, Tyrrhenian Sea and Southern Sicily. Analysis of molecular variance revealed a genetic partitioning mainly due to differences between groups presumably due to late Miocene geological events, while less polymorphism was present within groups and populations.
publishDate 2017
dc.date.none.fl_str_mv 2017
2017-01-01T00:00:00Z
2020-01-19T20:07:31Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10451/41142
url http://hdl.handle.net/10451/41142
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2475-0263
10.1080/24750263.2017.1290154
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Taylor & Francis Open
publisher.none.fl_str_mv Taylor & Francis Open
dc.source.none.fl_str_mv reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron:RCAAP
instname_str FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron_str RCAAP
institution RCAAP
reponame_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
collection Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository.name.fl_str_mv Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
repository.mail.fl_str_mv info@rcaap.pt
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