Genotype-Phenotype Correlations in PMM2-CDG

Bibliographic Details
Main Author: Vaes, Laurien
Publication Date: 2021
Other Authors: Rymen, Daisy, Cassiman, David, Ligezka, Anna, Vanhoutvin, Nele, Quelhas, D, Morava, Eva, Witters, Peter
Format: Article
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/10400.16/2841
Summary: PMM2-CDG is a rare disease, causing hypoglycosylation of multiple proteins, hence preventing full functionality. So far, no direct genotype-phenotype correlations have been identified. We carried out a retrospective cohort study on 26 PMM2-CDG patients. We collected the identified genotype, as well as continuous variables indicating the disease severity (based on Nijmegen Pediatric CDG Rating Score or NPCRS) and dichotomous variables reflecting the patients' phenotype. The phenotypic effects of patients' genotype were studied using non-parametric and Chi-Square tests. Seventeen different pathogenic variants have been studied. Variants with zero enzyme activity had no significant impact on the Nijmegen score. Pathogenic variants involving the stabilization/folding domain have a significantly lower total NPCRS (p = 0.017): presence of the p.Cys241Ser mutation had a significantly lower subscore 1,3 and NPCRS (p = 0.04) and thus result in a less severe phenotype. On the other hand, variants involving the dimerization domain, p.Pro113Leu and p.Phe119Leu, resulted in a significantly higher NPCRS score (p = 0.002), which indicates a worse clinical course. These concepts give a better insight in the phenotypic prognosis of PMM2-CDG, according to their molecular base.
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spelling Genotype-Phenotype Correlations in PMM2-CDGNPCRSPMM2-CDGcongenital disorders of glycosylationgenotypemutationPMM2-CDG is a rare disease, causing hypoglycosylation of multiple proteins, hence preventing full functionality. So far, no direct genotype-phenotype correlations have been identified. We carried out a retrospective cohort study on 26 PMM2-CDG patients. We collected the identified genotype, as well as continuous variables indicating the disease severity (based on Nijmegen Pediatric CDG Rating Score or NPCRS) and dichotomous variables reflecting the patients' phenotype. The phenotypic effects of patients' genotype were studied using non-parametric and Chi-Square tests. Seventeen different pathogenic variants have been studied. Variants with zero enzyme activity had no significant impact on the Nijmegen score. Pathogenic variants involving the stabilization/folding domain have a significantly lower total NPCRS (p = 0.017): presence of the p.Cys241Ser mutation had a significantly lower subscore 1,3 and NPCRS (p = 0.04) and thus result in a less severe phenotype. On the other hand, variants involving the dimerization domain, p.Pro113Leu and p.Phe119Leu, resulted in a significantly higher NPCRS score (p = 0.002), which indicates a worse clinical course. These concepts give a better insight in the phenotypic prognosis of PMM2-CDG, according to their molecular base.MDPIRepositório Científico da Unidade Local de Saúde de Santo AntónioVaes, LaurienRymen, DaisyCassiman, DavidLigezka, AnnaVanhoutvin, NeleQuelhas, DMorava, EvaWitters, Peter2023-10-24T09:38:57Z2021-102021-10-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.16/2841eng2073-442510.3390/genes12111658info:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2025-02-26T10:09:15Zoai:repositorio.chporto.pt:10400.16/2841Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T21:20:53.324317Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Genotype-Phenotype Correlations in PMM2-CDG
title Genotype-Phenotype Correlations in PMM2-CDG
spellingShingle Genotype-Phenotype Correlations in PMM2-CDG
Vaes, Laurien
NPCRS
PMM2-CDG
congenital disorders of glycosylation
genotype
mutation
title_short Genotype-Phenotype Correlations in PMM2-CDG
title_full Genotype-Phenotype Correlations in PMM2-CDG
title_fullStr Genotype-Phenotype Correlations in PMM2-CDG
title_full_unstemmed Genotype-Phenotype Correlations in PMM2-CDG
title_sort Genotype-Phenotype Correlations in PMM2-CDG
author Vaes, Laurien
author_facet Vaes, Laurien
Rymen, Daisy
Cassiman, David
Ligezka, Anna
Vanhoutvin, Nele
Quelhas, D
Morava, Eva
Witters, Peter
author_role author
author2 Rymen, Daisy
Cassiman, David
Ligezka, Anna
Vanhoutvin, Nele
Quelhas, D
Morava, Eva
Witters, Peter
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico da Unidade Local de Saúde de Santo António
dc.contributor.author.fl_str_mv Vaes, Laurien
Rymen, Daisy
Cassiman, David
Ligezka, Anna
Vanhoutvin, Nele
Quelhas, D
Morava, Eva
Witters, Peter
dc.subject.por.fl_str_mv NPCRS
PMM2-CDG
congenital disorders of glycosylation
genotype
mutation
topic NPCRS
PMM2-CDG
congenital disorders of glycosylation
genotype
mutation
description PMM2-CDG is a rare disease, causing hypoglycosylation of multiple proteins, hence preventing full functionality. So far, no direct genotype-phenotype correlations have been identified. We carried out a retrospective cohort study on 26 PMM2-CDG patients. We collected the identified genotype, as well as continuous variables indicating the disease severity (based on Nijmegen Pediatric CDG Rating Score or NPCRS) and dichotomous variables reflecting the patients' phenotype. The phenotypic effects of patients' genotype were studied using non-parametric and Chi-Square tests. Seventeen different pathogenic variants have been studied. Variants with zero enzyme activity had no significant impact on the Nijmegen score. Pathogenic variants involving the stabilization/folding domain have a significantly lower total NPCRS (p = 0.017): presence of the p.Cys241Ser mutation had a significantly lower subscore 1,3 and NPCRS (p = 0.04) and thus result in a less severe phenotype. On the other hand, variants involving the dimerization domain, p.Pro113Leu and p.Phe119Leu, resulted in a significantly higher NPCRS score (p = 0.002), which indicates a worse clinical course. These concepts give a better insight in the phenotypic prognosis of PMM2-CDG, according to their molecular base.
publishDate 2021
dc.date.none.fl_str_mv 2021-10
2021-10-01T00:00:00Z
2023-10-24T09:38:57Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.16/2841
url http://hdl.handle.net/10400.16/2841
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2073-4425
10.3390/genes12111658
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eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
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instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
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reponame_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
collection Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository.name.fl_str_mv Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
repository.mail.fl_str_mv info@rcaap.pt
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