Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region

Detalhes bibliográficos
Autor(a) principal: Chávez-Galarza, Julio
Data de Publicação: 2017
Outros Autores: Garnery, Lionel, Henriques, Dora, Neves, Cátia J., Loucif-Ayad, Wahida, Johnston, J. Spencer, Pinto, M. Alice
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Texto Completo: http://hdl.handle.net/10198/14545
Resumo: A large-scale survey of the Iberian honey bee (Apis mellifera iberiensis) diversity patterns, using sequence data of the tRNAleu-cox2 mitochondrial DNA (mtDNA) region, demonstrates that earlier studies based on the DraI test missed significant components of genetic variation. Based on results from this survey, existing haplotype names were revised and updated following a nomenclature system established earlier and extended herein for the intergenic region. A more complete picture of the complex diversity patterns of IHBs is revealed that includes 164 novel haplotypes, 113 belonging to lineage A and 51 to lineage M and within lineage A and 69 novel haplotypes that belong to sub-lineage AI, 13 to AII, and 31 to AIII. Within lineage M, two novel haplotypes show a striking architecture with features of lineages A and M, which based on sequence comparisons and relationships among haplotypes are seemingly ancestral. These data expand our knowledge of the complex architecture of the tRNAleu-cox2 intergenic region in Apis mellifera and re-emphasizes the importance of Iberia as a source of honey bee mtDNA diversity.
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spelling Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic regionIberian honey beeApis Mellifera intermissaAncestral haplotype MDraI testA large-scale survey of the Iberian honey bee (Apis mellifera iberiensis) diversity patterns, using sequence data of the tRNAleu-cox2 mitochondrial DNA (mtDNA) region, demonstrates that earlier studies based on the DraI test missed significant components of genetic variation. Based on results from this survey, existing haplotype names were revised and updated following a nomenclature system established earlier and extended herein for the intergenic region. A more complete picture of the complex diversity patterns of IHBs is revealed that includes 164 novel haplotypes, 113 belonging to lineage A and 51 to lineage M and within lineage A and 69 novel haplotypes that belong to sub-lineage AI, 13 to AII, and 31 to AIII. Within lineage M, two novel haplotypes show a striking architecture with features of lineages A and M, which based on sequence comparisons and relationships among haplotypes are seemingly ancestral. These data expand our knowledge of the complex architecture of the tRNAleu-cox2 intergenic region in Apis mellifera and re-emphasizes the importance of Iberia as a source of honey bee mtDNA diversity.SpringerBiblioteca Digital do IPBChávez-Galarza, JulioGarnery, LionelHenriques, DoraNeves, Cátia J.Loucif-Ayad, WahidaJohnston, J. SpencerPinto, M. Alice2017-09-25T16:37:15Z20172017-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10198/14545engChávez-Galarza, Julio; Garnery, Lionel; Henriques, Dora; Neves, Cátia J.; Loucif-Ayad, Wahida; Jonhston, J. Spencer; Pinto, M. Alice (2017). Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region. Apidologie. ISSN 0044-8435. 48:4, p. 533-54410.1007/s13592-017-0498-2info:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2025-02-25T12:04:42Zoai:bibliotecadigital.ipb.pt:10198/14545Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-28T11:31:08.271720Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region
title Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region
spellingShingle Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region
Chávez-Galarza, Julio
Iberian honey bee
Apis Mellifera intermissa
Ancestral haplotype M
DraI test
title_short Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region
title_full Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region
title_fullStr Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region
title_full_unstemmed Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region
title_sort Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region
author Chávez-Galarza, Julio
author_facet Chávez-Galarza, Julio
Garnery, Lionel
Henriques, Dora
Neves, Cátia J.
Loucif-Ayad, Wahida
Johnston, J. Spencer
Pinto, M. Alice
author_role author
author2 Garnery, Lionel
Henriques, Dora
Neves, Cátia J.
Loucif-Ayad, Wahida
Johnston, J. Spencer
Pinto, M. Alice
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Biblioteca Digital do IPB
dc.contributor.author.fl_str_mv Chávez-Galarza, Julio
Garnery, Lionel
Henriques, Dora
Neves, Cátia J.
Loucif-Ayad, Wahida
Johnston, J. Spencer
Pinto, M. Alice
dc.subject.por.fl_str_mv Iberian honey bee
Apis Mellifera intermissa
Ancestral haplotype M
DraI test
topic Iberian honey bee
Apis Mellifera intermissa
Ancestral haplotype M
DraI test
description A large-scale survey of the Iberian honey bee (Apis mellifera iberiensis) diversity patterns, using sequence data of the tRNAleu-cox2 mitochondrial DNA (mtDNA) region, demonstrates that earlier studies based on the DraI test missed significant components of genetic variation. Based on results from this survey, existing haplotype names were revised and updated following a nomenclature system established earlier and extended herein for the intergenic region. A more complete picture of the complex diversity patterns of IHBs is revealed that includes 164 novel haplotypes, 113 belonging to lineage A and 51 to lineage M and within lineage A and 69 novel haplotypes that belong to sub-lineage AI, 13 to AII, and 31 to AIII. Within lineage M, two novel haplotypes show a striking architecture with features of lineages A and M, which based on sequence comparisons and relationships among haplotypes are seemingly ancestral. These data expand our knowledge of the complex architecture of the tRNAleu-cox2 intergenic region in Apis mellifera and re-emphasizes the importance of Iberia as a source of honey bee mtDNA diversity.
publishDate 2017
dc.date.none.fl_str_mv 2017-09-25T16:37:15Z
2017
2017-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10198/14545
url http://hdl.handle.net/10198/14545
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Chávez-Galarza, Julio; Garnery, Lionel; Henriques, Dora; Neves, Cátia J.; Loucif-Ayad, Wahida; Jonhston, J. Spencer; Pinto, M. Alice (2017). Mitochondrial DNA variation of Apis mellifera iberiensis: further insights from a large scale study using sequence data of the tRNAleu-cox2 intergenic region. Apidologie. ISSN 0044-8435. 48:4, p. 533-544
10.1007/s13592-017-0498-2
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Springer
publisher.none.fl_str_mv Springer
dc.source.none.fl_str_mv reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron:RCAAP
instname_str FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
instacron_str RCAAP
institution RCAAP
reponame_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
collection Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository.name.fl_str_mv Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
repository.mail.fl_str_mv info@rcaap.pt
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