Pyruvate kinase deficiency in sub-Saharan Africa: identification of a highly frequent missense mutation (G829A;Glu277Lys) and association with malaria

Bibliographic Details
Main Author: Machado, Patrícia
Publication Date: 2012
Other Authors: Manco, Licínio, Gomes, Cláudia, Mendes, Cristina, Fernandes, Natércia, Salomé, Graça, Sitoe, Luis, Chibute, Sérgio, Langa, José, Ribeiro, Letícia, Miranda, Juliana, Cano, Jorge, Pinto, João, Amorim, António, do Rosário, Virgílio E, Arez, Ana Paula
Format: Article
Language: eng
Source: Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
Download full: http://hdl.handle.net/10316/109933
https://doi.org/10.1371/journal.pone.0047071
Summary: Background: Pyruvate kinase (PK) deficiency, causing hemolytic anemia, has been associated to malaria protection and its prevalence in sub-Saharan Africa is not known so far. This work shows the results of a study undertaken to determine PK deficiency occurrence in some sub-Saharan African countries, as well as finding a prevalent PK variant underlying this deficiency. Materials and Methods: Blood samples of individuals from four malaria endemic countries (Mozambique, Angola, Equatorial Guinea and Sao Tome and Principe) were analyzed in order to determine PK deficiency occurrence and detect any possible high frequent PK variant mutation. The association between this mutation and malaria was ascertained through association studies involving sample groups from individuals showing different malaria infection and outcome status. Results: The percentage of individuals showing a reduced PK activity in Maputo was 4.1% and the missense mutation G829A (Glu277Lys) in the PKLR gene (only identified in three individuals worldwide to date) was identified in a high frequency. Heterozygous carrier frequency was between 6.7% and 2.6%. A significant association was not detected between either PK reduced activity or allele 829A frequency and malaria infection and outcome, although the variant was more frequent among individuals with uncomplicated malaria. Conclusions: This was the first study on the occurrence of PK deficiency in several areas of Africa. A common PKLR mutation G829A (Glu277Lys) was identified. A global geographical co-distribution between malaria and high frequency of PK deficiency seems to occur suggesting that malaria may be a selective force raising the frequency of this 277Lys variant.
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spelling Pyruvate kinase deficiency in sub-Saharan Africa: identification of a highly frequent missense mutation (G829A;Glu277Lys) and association with malariaAdolescentAdultAfrica South of the SaharaAgedAnemiaChildChild, PreschoolEndemic DiseasesGene FrequencyGenetic Predisposition to DiseaseGenetic TestingGeographyHumansInfantMalariaMiddle AgedModels, MolecularMutation, MissensePlasmodiumPolymorphism, Single-Stranded ConformationalProtein Structure, SecondaryPyruvate KinaseYoung AdultGenetic Association StudiesBackground: Pyruvate kinase (PK) deficiency, causing hemolytic anemia, has been associated to malaria protection and its prevalence in sub-Saharan Africa is not known so far. This work shows the results of a study undertaken to determine PK deficiency occurrence in some sub-Saharan African countries, as well as finding a prevalent PK variant underlying this deficiency. Materials and Methods: Blood samples of individuals from four malaria endemic countries (Mozambique, Angola, Equatorial Guinea and Sao Tome and Principe) were analyzed in order to determine PK deficiency occurrence and detect any possible high frequent PK variant mutation. The association between this mutation and malaria was ascertained through association studies involving sample groups from individuals showing different malaria infection and outcome status. Results: The percentage of individuals showing a reduced PK activity in Maputo was 4.1% and the missense mutation G829A (Glu277Lys) in the PKLR gene (only identified in three individuals worldwide to date) was identified in a high frequency. Heterozygous carrier frequency was between 6.7% and 2.6%. A significant association was not detected between either PK reduced activity or allele 829A frequency and malaria infection and outcome, although the variant was more frequent among individuals with uncomplicated malaria. Conclusions: This was the first study on the occurrence of PK deficiency in several areas of Africa. A common PKLR mutation G829A (Glu277Lys) was identified. A global geographical co-distribution between malaria and high frequency of PK deficiency seems to occur suggesting that malaria may be a selective force raising the frequency of this 277Lys variant.Public Library of Science2012info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/109933http://hdl.handle.net/10316/109933https://doi.org/10.1371/journal.pone.0047071eng1932-6203Machado, PatríciaManco, LicínioGomes, CláudiaMendes, CristinaFernandes, NatérciaSalomé, GraçaSitoe, LuisChibute, SérgioLanga, JoséRibeiro, LetíciaMiranda, JulianaCano, JorgePinto, JoãoAmorim, Antóniodo Rosário, Virgílio EArez, Ana Paulainfo:eu-repo/semantics/openAccessreponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiainstacron:RCAAP2023-11-07T12:38:13Zoai:estudogeral.uc.pt:10316/109933Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireinfo@rcaap.ptopendoar:https://opendoar.ac.uk/repository/71602025-05-29T06:01:36.145357Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologiafalse
dc.title.none.fl_str_mv Pyruvate kinase deficiency in sub-Saharan Africa: identification of a highly frequent missense mutation (G829A;Glu277Lys) and association with malaria
title Pyruvate kinase deficiency in sub-Saharan Africa: identification of a highly frequent missense mutation (G829A;Glu277Lys) and association with malaria
spellingShingle Pyruvate kinase deficiency in sub-Saharan Africa: identification of a highly frequent missense mutation (G829A;Glu277Lys) and association with malaria
Machado, Patrícia
Adolescent
Adult
Africa South of the Sahara
Aged
Anemia
Child
Child, Preschool
Endemic Diseases
Gene Frequency
Genetic Predisposition to Disease
Genetic Testing
Geography
Humans
Infant
Malaria
Middle Aged
Models, Molecular
Mutation, Missense
Plasmodium
Polymorphism, Single-Stranded Conformational
Protein Structure, Secondary
Pyruvate Kinase
Young Adult
Genetic Association Studies
title_short Pyruvate kinase deficiency in sub-Saharan Africa: identification of a highly frequent missense mutation (G829A;Glu277Lys) and association with malaria
title_full Pyruvate kinase deficiency in sub-Saharan Africa: identification of a highly frequent missense mutation (G829A;Glu277Lys) and association with malaria
title_fullStr Pyruvate kinase deficiency in sub-Saharan Africa: identification of a highly frequent missense mutation (G829A;Glu277Lys) and association with malaria
title_full_unstemmed Pyruvate kinase deficiency in sub-Saharan Africa: identification of a highly frequent missense mutation (G829A;Glu277Lys) and association with malaria
title_sort Pyruvate kinase deficiency in sub-Saharan Africa: identification of a highly frequent missense mutation (G829A;Glu277Lys) and association with malaria
author Machado, Patrícia
author_facet Machado, Patrícia
Manco, Licínio
Gomes, Cláudia
Mendes, Cristina
Fernandes, Natércia
Salomé, Graça
Sitoe, Luis
Chibute, Sérgio
Langa, José
Ribeiro, Letícia
Miranda, Juliana
Cano, Jorge
Pinto, João
Amorim, António
do Rosário, Virgílio E
Arez, Ana Paula
author_role author
author2 Manco, Licínio
Gomes, Cláudia
Mendes, Cristina
Fernandes, Natércia
Salomé, Graça
Sitoe, Luis
Chibute, Sérgio
Langa, José
Ribeiro, Letícia
Miranda, Juliana
Cano, Jorge
Pinto, João
Amorim, António
do Rosário, Virgílio E
Arez, Ana Paula
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Machado, Patrícia
Manco, Licínio
Gomes, Cláudia
Mendes, Cristina
Fernandes, Natércia
Salomé, Graça
Sitoe, Luis
Chibute, Sérgio
Langa, José
Ribeiro, Letícia
Miranda, Juliana
Cano, Jorge
Pinto, João
Amorim, António
do Rosário, Virgílio E
Arez, Ana Paula
dc.subject.por.fl_str_mv Adolescent
Adult
Africa South of the Sahara
Aged
Anemia
Child
Child, Preschool
Endemic Diseases
Gene Frequency
Genetic Predisposition to Disease
Genetic Testing
Geography
Humans
Infant
Malaria
Middle Aged
Models, Molecular
Mutation, Missense
Plasmodium
Polymorphism, Single-Stranded Conformational
Protein Structure, Secondary
Pyruvate Kinase
Young Adult
Genetic Association Studies
topic Adolescent
Adult
Africa South of the Sahara
Aged
Anemia
Child
Child, Preschool
Endemic Diseases
Gene Frequency
Genetic Predisposition to Disease
Genetic Testing
Geography
Humans
Infant
Malaria
Middle Aged
Models, Molecular
Mutation, Missense
Plasmodium
Polymorphism, Single-Stranded Conformational
Protein Structure, Secondary
Pyruvate Kinase
Young Adult
Genetic Association Studies
description Background: Pyruvate kinase (PK) deficiency, causing hemolytic anemia, has been associated to malaria protection and its prevalence in sub-Saharan Africa is not known so far. This work shows the results of a study undertaken to determine PK deficiency occurrence in some sub-Saharan African countries, as well as finding a prevalent PK variant underlying this deficiency. Materials and Methods: Blood samples of individuals from four malaria endemic countries (Mozambique, Angola, Equatorial Guinea and Sao Tome and Principe) were analyzed in order to determine PK deficiency occurrence and detect any possible high frequent PK variant mutation. The association between this mutation and malaria was ascertained through association studies involving sample groups from individuals showing different malaria infection and outcome status. Results: The percentage of individuals showing a reduced PK activity in Maputo was 4.1% and the missense mutation G829A (Glu277Lys) in the PKLR gene (only identified in three individuals worldwide to date) was identified in a high frequency. Heterozygous carrier frequency was between 6.7% and 2.6%. A significant association was not detected between either PK reduced activity or allele 829A frequency and malaria infection and outcome, although the variant was more frequent among individuals with uncomplicated malaria. Conclusions: This was the first study on the occurrence of PK deficiency in several areas of Africa. A common PKLR mutation G829A (Glu277Lys) was identified. A global geographical co-distribution between malaria and high frequency of PK deficiency seems to occur suggesting that malaria may be a selective force raising the frequency of this 277Lys variant.
publishDate 2012
dc.date.none.fl_str_mv 2012
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/109933
http://hdl.handle.net/10316/109933
https://doi.org/10.1371/journal.pone.0047071
url http://hdl.handle.net/10316/109933
https://doi.org/10.1371/journal.pone.0047071
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1932-6203
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Public Library of Science
publisher.none.fl_str_mv Public Library of Science
dc.source.none.fl_str_mv reponame:Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
instname:FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
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reponame_str Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
collection Repositórios Científicos de Acesso Aberto de Portugal (RCAAP)
repository.name.fl_str_mv Repositórios Científicos de Acesso Aberto de Portugal (RCAAP) - FCCN, serviços digitais da FCT – Fundação para a Ciência e a Tecnologia
repository.mail.fl_str_mv info@rcaap.pt
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